Pangasianodon hypophthalmus (striped catfish): 113528095
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Entry
113528095 CDS
T05759
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
113528095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MACPF
C2
EGF_PRF1
Ig_NPH4_3rd
Motif
Other DBs
NCBI-GeneID:
113528095
NCBI-ProteinID:
XP_026772229
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MLQTLLIWAIVANFFPPTTSQTCFKANESQCGNVDFAPGSNLAGEGFDITTMQRKGAFVI
DMSSWIQNNSCTLCKNPYMGGQVQKLPVSVVDWRPSQKCSMKLSSSLYESSEALVSASTF
SVENNWKVDLQIVTPAVQGSLMLAGSNSKLAKYSMDKTKKDKFSFTSHAVSCGYYKYRVS
SRPVLHPELNNEFESLPKIYHESTKHLYFRLIDKFGTHYITKVTLGGEVRSVTSIKECQA
SLQGLSVDEVKMCLDVEASVSMGIAANLQTEAHHCKQAKDKTLNKKSFSSSFSDRETDVI
GGYTQSVDLLFSSKNDPKAYKEWVSSLPTHPDVLSYSLEPLHQLLPAKKLLRVHLRNAIK
DYILQRALLKNCTSSCKTGVKTNPEEPCSCSCHNNPGVALNCCPTQRGSAQVTVTAIKAT
GLYGDYFTQTDAFVKILLNGKINGGQTSVIPDNNSPTWNWDFHLGTVDVTHFSSVKLEVW
DEDGDSDDDLLGACNVPLKSGVEKNACALNHGVLYYKVQVKCIPGLAGPSCTEYNPSPME
AQLEKLYVSRNARPIPRGMLLEMGVLLDERIPHFNQSNIRKAKGLEL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagacacttctgatttgggccatcgttgccaattttttccctcctacaaccagc
cagacctgcttcaaggccaatgagtctcagtgtggcaatgtggacttcgctccaggatcc
aacctagcaggagaaggctttgacatcaccaccatgcaacggaaaggggcctttgtcatt
gacatgagctcctggatccagaacaactcctgtactctgtgtaaaaacccctacatggga
ggtcaagtgcagaagctcccagtttctgtggtggactggagaccaagtcagaagtgcagc
atgaagttgtccagctctctctatgagtccagcgaggccctggtcagtgccagcaccttc
tctgtcgagaacaactggaaggtagacttgcaaatagtaactccagcagttcagggatca
ctgatgctggcaggcagtaactccaagctggccaaatattcaatggacaaaaccaaaaaa
gacaagttcagcttcaccagccatgctgtctcttgtggatactacaaatacagagtttcg
agccgtccagtcctgcaccctgagctaaataatgaattcgaaagtctccctaagatatat
catgagtctacaaagcacctctatttcaggctgattgacaagtttggtactcattatatc
acaaaggtgactctgggtggagaggttcgttctgtgaccagcatcaaggagtgccaggca
tccctgcagggtctgagtgtggatgaggtgaagatgtgtctggacgtggaggcgtctgtc
agtatgggaatagctgcaaacctgcagaccgaggctcatcactgcaaacaggccaaggac
aagactctgaacaaaaagagcttctccagcagcttcagtgacagggaaacagatgtgatt
ggtggctacactcagagtgttgacctccttttctcgtcaaaaaatgacccaaaggcctat
aaggagtgggtctcatctctgcccactcaccctgatgtgctttcctactcgctcgagccc
cttcaccaattgctgccggcaaagaaattactccgagtgcatttgcgcaatgccatcaag
gactacatcctccagagggctctgttaaaaaactgcacaagctcatgtaagaccggtgtg
aagaccaaccctgaggagccgtgtagctgcagctgccacaacaacccgggcgtggccctc
aactgctgccccactcagagaggatctgctcaagtcaccgtaactgcgatcaaagccaca
ggtttatatggagattacttcactcagacagacgcatttgtcaagatcctcctcaatggt
aaaatcaacggaggccagacgtctgtgatcccggataacaactcgcccacttggaactgg
gatttccatcttggaactgtggatgtaactcatttcagcagcgtgaagctggaggtgtgg
gatgaggacggtgattcagatgatgaccttctcggggcatgcaacgttccactgaaatct
ggagtggagaagaatgcctgtgcactcaatcacggagtgctgtattataaagtgcaggtg
aagtgcattcctggtttggctggtccttcgtgcacggagtacaatccctctcccatggag
gcacagctggagaaactgtacgtctcccggaatgctcgcccgattcccagaggcatgctg
ctggagatgggagtgctcctcgatgaacgcattccccacttcaaccagagcaacattcgc
aaagctaaaggtcttgaattgtag
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