Pangasianodon hypophthalmus (striped catfish): 113528098
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Entry
113528098 CDS
T05759
Symbol
abca3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113528098 (abca3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113528098 (abca3)
Transporters [BR:
phyp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113528098 (abca3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
RsgA_GTPase
AAA_15
AAA_23
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
113528098
NCBI-ProteinID:
XP_026772232
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
MAVWRQFGLLLWKNYLQQKRQILVTLVEIALPLLFSAILIVLRQKVSFTNYPNATHYDSF
LLERPPAHLPSGLQLAYVPANSSIVRQVAEDVQLSLDHGFISAVRGFETEHQFEEFVKTD
PESAKILAAVVFEHSFTQDDEPLPLQVSYHLRFSYNPRNAPSKEKSELNPNSDLNWHTLS
LFPLVQLPGPREQHDSRGGTPGYYREGFLMVQHAVDRAIMKAYNRTAATALFTQTWVVLS
RFPYPAFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAIVQEKERKLKEYMRMMGLSNWL
HWSAWFLMFFLFLSISIFFVTLLFCVQVSPNGAVLTYSDPTLVFVFFLAFAVATISFCFM
ISSFFSRANVAAAASGFLYFFSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIG
MFEAKGMGIQWSNLFEPVTVDDDFSLAQVLGLLLLDAILYSLVAWYIEAVFPGEYGVPRP
WYFFMLPSYWCNSPRVALLKEKQEEEDAEKALKGEFIEEEPTGLVSGVKIKHLAKVFKMG
NKTKEAVKDLTLNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMA
LIRRSLGLCPQHDVLFDNLTVREHLLFYAQLKGYPREKIPDEVDRIIRILNLEDKKNARS
KTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHF
MDEADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEISRLVHMYVP
NATLESSAGAELSYILPKESTSRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKL
VDSSLDIQAIQLPALQYQHERRSHDWTVDDTSSISGMTDVTDFTDSGTLISEDCSNIKLN
TGAKLYMQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTAVALVVAQTLPGQHKTPELPL
ALSRYGPTTVPMALDSNAGPLATALAEAYAAQLAAESATPVTNLTDFSEYILNNAMREGG
AFNERCVVGAAFHGRTNRFAEITGYFNNQGYHTPATALMLVDNALYRLLAGPNASIQTGN
YPMPRNMSETAQSQLSEGQTGFAIAINLMYGMASLASTFALLLVIERSVKSKHVQRVSGV
YLSNFWFSALLWDLINFALPCLLMLVVFRAFGVKAFVEENHLVDVLLLLLLYGWAVIPLM
YLLSFLFSSAATAYTRLTIFNIISGTATFLAVTIMTIPELELQNLSRLLDKVFLLFPNYC
LGMSFSQFYQNYETISFCTTSFLTKEICQFYNITYQLNYFSMNEPGVGCYLVAMSLQGVV
FLILLFVMELQCVNTLFTLCRRSKKGMLVGEEALQPEDRDVADERKRVLDCQPVVESMVG
SPLILQELTKVYPGSQSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDETVTAG
DAFIDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVFACVENV
LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKIHME
ADLEEMDLQLFKDFIESTFPGSLLKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYSIE
DYCVSQISLEQVFLSFAQFQHCSEGWRKSD
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtggcgacagtttgggctacttctctggaagaactacctacagcaaaaacgt
cagatcttggtgacattggtggagatcgcactgcccctactgttctccgccatcctgatt
gtactgcgtcagaaggtgtcctttaccaactaccccaatgccacgcattacgatagcttc
ttactggaaaggcctcctgctcatctgccctcaggcctgcagcttgcctatgtgccggca
aattccagcatagtacgccaggtggctgaagacgtgcagctcagcctggaccatggcttc
atcagtgctgtgcgtgggtttgagactgagcatcagttcgaagagttcgtgaagacagac
cctgaatcagcaaagatcctggcagcagtggtgtttgagcactcctttactcaggatgat
gaacctctcccacttcaggtcagttatcacttgcgcttctcgtataatccccgaaatgct
ccttccaaggaaaaatcagagctgaatccaaacagtgatcttaactggcacactctcagc
ctgttccccctcgttcagctgcctggacctcgagagcagcatgattctcgtgggggcact
ccaggttattaccgtgagggcttcctaatggtccagcatgcagtggaccgagccatcatg
aaggcctacaacaggacagcggcgactgccctcttcacgcagacatgggtggtgctgtca
cgcttcccgtacccagctttcatctatgatgtcttcatcctggccatccagaaccagctg
cccctcctgctggtgctcagcttcacctacacgtccctcaacattgtccgagccatagtg
caggagaaggaaagaaaactcaaggaatacatgagaatgatgggtctgagcaactggctg
cactggagtgcctggttcctcatgttcttccttttcctctctatctccattttctttgtc
accttgctcttctgtgtccaggtgagtccaaatggagcagtgctgacctatagtgaccct
acactagtcttcgtcttcttccttgcatttgccgtggctactatcagcttctgtttcatg
atcagctccttcttctccagagctaacgttgcagcagcagcaagtggtttcctgtacttc
tttagctacctgccatacctcttcctgtggccgcgttatgacctgctatcccacgctcag
aaagtgtctgcctgtctcatctccaatgtggccatggctatgggtgcccagcttattggc
atgtttgaagccaaaggcatggggatccagtggagtaatctgtttgagcctgtgactgtg
gatgatgacttctcactggctcaggttcttgggctcttgctgctggatgccatactctac
agcctggtggcttggtacatcgaggctgtcttccctggcgagtatggagtgccacgacca
tggtactttttcatgctgccctcatactggtgcaacagccctagagttgccctgttgaag
gagaagcaggaggaagaggatgcagagaaagcgctgaagggcgagttcattgaagaagag
ccaactggattagtctcaggggtcaaaatcaagcacctggccaaggtttttaaaatgggc
aataagaccaaagaagcagtgaaggatctcacattaaacatgtttgaaggccagatcaca
gtgctgctaggacacaacggcgctggaaagaccaccacactgtctatgctgactggcttg
tttcctcccagcagcggccgagcttacatcaatggctatgatatatgccaggatatggcg
ctgatccgccgcagcctaggtctgtgtccacaacacgatgtgcttttcgacaacctcacg
gtccgagagcatctgcttttctatgcccagctgaagggctacccacgtgaaaagattcca
gatgaggtggaccgcatcatccgtatcctaaatctggaggataagaagaatgcacggtca
aagaccctttcaggcggaatgaagcgcaagctttctatcggaattgcacttattggagac
tcaaaggtggttatgctggacgagcctacctctggcatggacccatcagccaggcgagcc
acatgggatcttttgcagggcgagaaacgaggtcgcaccatccttctcaccacgcatttc
atggatgaagctgacctactgggagaccgcattgctatcatggctggtggggaactccag
tgctgtggctcacctctcttcctcaaaaacaaatacggtgctggctaccacatggtgata
gtaaaagacgcgttgtgtaatgtatccgagatcagccgcctggtccacatgtacgtgccc
aatgccaccctggagagcagcgctggggctgaactttcctacatcctgccaaaagagagc
accagcaggtttgagcttctgtttgctgagctggaaatgaacagagaggagttgggcatc
gcaagctatggagcatctgttaccaccatggaggaagtttttcttagggtcgggaagctg
gtggactccagtctagacattcaggccattcagcttccagccctgcagtaccagcatgaa
cgcaggtcacatgactggacagttgatgatactagcagtatcagcggcatgactgatgtg
acggacttcactgatagtggcacattgatctcagaggactgctccaacatcaaactcaac
acaggggctaagctgtacatgcagcagttctacgccatgttcctaaagagggcactgtat
agctggcggaactggaaggtgatggtggcacaatttttagtgccacttatcttcacagca
gtcgcccttgtggtggcccaaactctccctgggcaacacaaaaccccagaacttccccta
gcactcagccgctatggccccaccactgtgcccatggccctggattctaatgcgggaccc
ctggctacagcacttgctgaagcctacgccgcccagcttgctgccgagagtgccacacca
gtgaccaatctaaccgacttctctgagtatatactgaacaatgccatgagggaaggagga
gccttcaacgagcgctgtgtggtgggtgctgcttttcatggccgaacgaacaggtttgct
gaaatcactggctacttcaacaaccaaggctaccacacaccggctactgcgcttatgctg
gtggataatgcactgtacaggctcttggctggccccaacgcttccatccagacaggaaac
tatcccatgccccgcaacatgtccgagacagcccagagccagctgtcagagggtcagact
ggctttgccatagccattaacctgatgtatggaatggcatccttggccagcacctttgcc
ctgctcctggtaattgagcgctctgtgaagtccaagcacgtacagcgggtcagcggcgtc
tacctctccaacttctggttctctgcattactctgggacctgatcaactttgcattgcct
tgtcttctaatgctggtggtgttccgtgcgtttggggtgaaggcctttgttgaggaaaat
cacttggtagatgtgctgcttttgttgctgctctatggctgggctgtgattccactcatg
tacctgctcagcttcctgttctctagcgctgccactgcttacacacgcctcaccatcttc
aacatcatcagcggcacagccaccttccttgccgtcaccatcatgaccatccctgagttg
gaactgcagaatctttcacgtctactggataaagtattcctgctattccccaactactgc
ctgggcatgtcttttagccaattctaccaaaactacgagaccatcagcttctgcaccacc
agcttcctcactaaagaaatctgccagttttacaacatcacctatcagctgaactacttc
tctatgaatgaacccggagtgggctgctacctggtggccatgtccctgcaaggtgtagtt
ttcctcatccttctcttcgtcatggagctccagtgcgtcaacacactcttcaccctctgc
aggagaagcaagaagggcatgctggttggagaagaagcccttcaacctgaggatagagac
gtcgctgatgagagaaagagggttttggattgccagcctgtggtggagtccatggtgggc
agtcctctcattctgcaagaacttactaaggtgtacccagggagtcagtctctgctggca
gtcgaccgtttgtccctggctgtggggaagggtgaatgctttggcctactaggttttaat
ggagcaggaaagacgactacatttaaaatgctgactggagacgagactgtgactgcaggg
gatgccttcatcgatggctacagtattcttcgtgatgtaaagaaggtacagcagcgaatt
ggctactgccctcagtttgatgctgtgctcgatcacatgactggccgagagactctcagc
atgtacgcaaggctcagaggaatcccagagaaatatgtgtttgcatgtgtggagaatgtg
ctccgctcattgctcctggagccgcacgcagacaaactggtccgcagttacagtgggggc
aacaagaggaagctgagtgcaggtatggctctgattggtgggccacctgtcatctttctg
gatgagccatccactggcatggaccctgtggccagacgcttgctctgggatgcagtcacc
cgcaccagagaatctggcaaagccattattatcacctcacacagtatggaggagtgtgag
gctttgtgcactagactggccgtgatggtcaatgggcagttcaagtgtctgggcagccca
cagcatctaaagagcaaatttggcagtggatacacactgttggccaaaatccacatggaa
gctgatttagaggagatggaccttcagctctttaaagacttcatcgagagcaccttccct
ggtagcttattgaaggatgaacaccagggaatggtacattatcacttgactgacaaaaca
ttaacctgggctcaggtttttgggacccttgaggcagctaaggagaaatatagcattgag
gactattgtgtgagtcagatctcactagagcaagttttcctgagctttgctcagttccag
cactgttcagaaggctggagaaaatcagactga
DBGET
integrated database retrieval system
