Pangasianodon hypophthalmus (striped catfish): 113528127
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Entry
113528127 CDS
T05759
Name
(RefSeq) nucleosome-remodeling factor subunit BPTF-like isoform X1
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113528127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113528127
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
113528127
NuRF complex (fruit fly)
113528127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
PHD
DDT
WSD
PHD-1st_NSD
PHD_5
Motif
Other DBs
NCBI-GeneID:
113528127
NCBI-ProteinID:
XP_026772305
LinkDB
All DBs
Position
Unknown
AA seq
3181 aa
AA seq
DB search
MRGRRGRPPKTLLMQEPSPGPVRGLRPRKGLKGKGRGGSDDDFVTPKRGNPHSSRGKRKA
GSATSRGRGRGRGAGRGRGRRSAASAVVYDDHESEEEEDAVSLASEEDDYMEEEPLTEEE
DEVIDNESDYLEELPEDDDDDASYCTESSHGSTPGRRRRRARRPPSPVLEQKEIPPLELP
KSSEDLLIPPEQLLNASAVYEVLRTFSTVLRLSPFRFEDFCAALAGQEQCALLAETHIAL
LKAILREEDSSNTTFGPADLKDSVNSTLYFVDGMTWPEVVRAYCESEPEYSGAALEHLEA
DEYPYGPLESKVKVLQFLVDRFLTTNMAREELMSEGAVQYDDHCRSCHRLGDLLCCETCS
AVYHLECVRPPLEAVPEDEWQCEICVAHRVPGVSDCVTEAQRSRPYLRQEPIGYDRHQRK
YWFLNRRVIVEEDGDEEEEKGKKIWYYSTKVQLGELIEVLDKEFWENDLCAMLEELREEI
HAHMDITEDLTNKARGSNKAYLTVANDEILERQKSRQEELDEVKQKAAEKDGLGSKVNEG
SEGDNPASSIADLSSPRPDSEDGTSASDKLAADAPAPPAGEESKSVCGRPQADSSGPSKA
DPPSSSAAENPGEGAQREWAEKSSESGCGGSGEPVLESEPPQIADENSCSSHFSISDCLR
APEEPDLADRSSQSSLNSQDDAGEGKGNGDGGKTGSATRMVTRLRNPESKLSQRKVMQDK
DASSQDSKALKETPLLSSLVRKDLGLKTSSSSGFFKLGQEGKFRVYHNQYSTNPLALNKH
QHREDHDKRRHLSHKFCMTPAGEFKWNGSVHGSKMLTVSTLRLTIIQLENNIPAPFLHPN
WASHRSNWIKAVQMCSKAREFALALAILECAIKPVVMLPVWKDSLGHTRLHRMTAMEREE
KEKVKKREKKLEDEETMQQATWVKYTFPIKHQVWKQKGEEYRVTGYGGWSWVSKTHVPRF
VPRLPGNTNVNYRKALEAANTGKESQTSCPEKCQNPIPETPKEHSSREEQTLKEEDEKKG
EKMEVDEKAVAKSDELNKNEASEKMDMSTPDFSSPSEEKVNNKSTPSPLKNDQCVKGESI
DCEESKVSAAGQPQASIEDDVVNVSQGFQLRTAYKKKGKGSKLDGLLERRVKQFALEERQ
RLEKLKQVAASKPNTENGTKDQEKTCPSLNQELKTEGPSFEATKTVLPDKAAIPMVKEKD
PVVQKLEFDQDEQVTHGSSERTENLDVRQGSNVKTEAAASLAEKEQKVAPEPEHKTGNGT
LITDAELNGGSQKDLEGSLNLNSKMACPKFEGTETKDTTENSSSMGENGLSIETNLPVHV
NGRDGSMDSLPTNMTNNINSKEMKQGEEEETEMLPSKDPIKSLMNGDLTQDSQNEKAQPN
EETRMDKSNLEYLPSQKVARLDGNSEGIADSAISSSPSQLSPAETVKSDGLSNSTKVSPM
ETEESRLKTFSPSPILDSTEESSLSSDVAENSTNSGSGVQTIITQVTTTTTTTTTVSESH
TVEASSLLDGTTNSKACSALTSAESKVESTMSVSTLSTTTTTTVTKVTNPSHGAKITEQC
KTVVTATFTDAKSAPSSTSVTSITLSKEYSTRDRVRLLKFSRCKKTRSGTALPSYRKFVT
KSSKKSIFVLPNDDLKKLARRAGIREVPVFNYNAKPALDIWPYPSPRPTFGITWRYRLQT
VKSLAGVSLMLRLLWACLRWDDMSVKPSPAVGTTRTETSDTEITTTEIIKRRDVGPYGIR
SEYCIRKIICPLGVPETPKETPTPQRKGLRSSALRPKKPEPSKQTGPVVMENWVPEEELE
LWEIRAFTERVEREKAQAADPTKVSVQKTAEEVKAQLEAQLKQQRLAAQQKRLEQQKTGV
TTVQSSLSSTPTSTASSTQKVVVGSLTSPVTPGTKVVLATKLGTPVQFQQGKNFQQSFAS
WVKQGQTSNTASTTSVTTVAASSVSTSGQTFQIAAASGLMTGNVITAKLPLPANSKIVTV
NVPTTQGGVVQVQQKVVGIIPSSTAPTAQSFSSFQPRSGSVNIRPNTSTSTQQATTGTPV
RPGMTVVRSPLQQATTLGKTIIRTPLMVQQGQGQQVVTQIIRGTPVSKAVSSSTPTQVVG
SPPRPSTPGQPQTPQTPSSTRPQQGQVKLTLAQLTQLTQGAQGGNPGLTVVIQGQGQTTG
QLQVIPQGVTVIPGPGQQLMQAAMPNGQVQRFLFTPMPPAPATPAPTVSTPSTSATPASS
STATTTTAGPTTPMRPAIQPAAQVSPIIQPSSLPSSPPSLSKSQPTLQPTTTSQTPTSSA
PVPALQTQFSSPQAPLQTQSQIQPQTQSQPQSQSQAQLHQIQPQAKTQPQIQSQLQQQPQ
IQPQPQPQSQLQHQVPSQPQSQLQIQSQQQPKLQPQHQTQAQPQLPPQQQLQPQLQLQPQ
QQPQHQAQLPPQQQLQLQPLLQPQQQIQPQPLLQPQQQIQPQPQLQPQQQSQLHPQPQQQ
SQLHPQPQQQSQLQPQPQQQSQLQPQSQQQSQLQPQLQQQSQLQPQPQQQLQSQPQLQSH
QKLQPQPQLQSQQKPHPQPQLQTQQQPQLHPQLQLQPQQQPQLHPQLQHQTQQPQLLPQQ
PSHVQPQPQLQPQPQSHLPAQTPVQPTSPLPVSHVAQVTSPPTQVASIAVAPQVTQTTVT
QVRPQIQLPAQLLSVPGIQQQVLSHIQNQVAAQLQAQHGTLPQQIKLQLPIQIQQQGGGQ
VQTHQIQNVVTIQTTSVQEQLQRIQQLRDQQQQKKKQQEAKREQAQQAASQSELLQKQVV
MKQNAVIEHLKQKKAMTPAEREENQRMIVCNQVMKFILDKIDKDEKQAAKKRKREESVEQ
KRSKQNASKLSALLFKHKEQLKAEILKKRALLDKELQVEVQEELRKDLSKLRREKEKAQA
AASQAAATAISAQTASLSTHPSTVTSPPSSHKRKRDEERDAALSKSKKKKMISTSSKDSK
RDTKLYCVCKTPYDESKFYIGCDLCSNWYHGECVGITEKEAKKMDDYICMECKRAQEGST
EELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEATHIDEYVCPQCQSTEEAMTVL
SPLTDKDYEGLKRILRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLSTMEQRIQKRF
YSKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEFLESFFVQKLKAFKASRSHNNKLQSSA
S
NT seq
9546 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagaagaggcaggccgcccaaaaccctgctgatgcaggagccttctccaggg
ccggtgcgcggtctcagaccccggaaaggattaaaggggaaggggagaggaggcagcgac
gacgattttgtgacacccaagcggggaaaccctcattcatcgcgggggaagaggaaagct
ggatccgcgacatcgcggggtagaggcaggggcagaggagctggaagaggcagggggaga
cggagcgctgctagcgccgtggtgtacgatgaccacgagagcgaggaagaggaggatgcg
gtgagtttagcctcggaggaggatgactatatggaagaagagcctctcacggaggaagaa
gatgaggtcatcgacaacgagtcggactacctcgaagagctgcccgaggatgatgatgat
gatgccagctactgcacggagagcagccacggcagcactccaggccggaggagacggcga
gcccgtcgaccgccctctcccgtactggagcagaaagagatccctcccctggagctgcca
aagtcctcagaggacctgctcatcccccccgagcagctcctgaacgcttcagccgtgtac
gaggtgctgcgcactttcagcacagtgttacgtctctcgcccttccgctttgaggacttc
tgtgcagcgctggcgggccaggagcagtgcgcactgctggccgagacacacatagcgtta
ctcaaggccattctgcgtgaggaggactcctccaataccacatttgggccagctgacctt
aaggacagcgtcaactctactctgtactttgtggacggcatgacgtggcccgaggtggtg
cgagcgtactgcgagagtgaacccgagtacagcggcgctgcactcgagcacctggaggct
gacgagtacccgtacgggccgctggagagcaaggtgaaggtgctgcagttccttgtcgac
cgctttctcaccactaacatggctcgtgaagagctgatgagcgaaggagccgtgcagtac
gacgatcactgccgctcgtgccaccgcctcggtgacctgctctgctgcgaaacatgctcg
gctgtctaccatctagagtgcgtgcggccgcctctggaggccgtgcccgaggatgagtgg
cagtgtgagatatgtgtagcacatcgtgtgcccggtgtcagcgactgcgtcacagaggcc
cagaggagccgcccgtacctgcggcaggagcccatcggctacgaccggcaccagcggaag
tactggttcctcaatcgcagggttattgtggaggaagatggtgatgaggaggaggagaaa
gggaagaagatctggtactacagcactaaagtgcagctgggggagctgatcgaggtcctg
gataaggaattctgggagaatgacctctgtgctatgctggaggagctgagggaggagatc
catgcgcacatggacatcacggaggacctcaccaacaaggctcgcggcagcaacaaggcc
tacctcactgtcgccaacgatgagatcctcgaaaggcagaagtctcgtcaggaggagctc
gatgaggtgaagcagaaagctgcagagaaggacggccttgggtcaaaggtcaatgaggga
tctgagggtgataacccagcctcatctattgctgacctgtcttctccacgaccggactcc
gaagacgggacttcggccagtgacaagcttgcggctgacgccccagctcctcctgctggt
gaagagagtaagagtgtgtgtgggcgccctcaggccgactcatctggcccatctaaagcc
gaccctccatcctcatctgcggcagagaaccctggggaaggggcgcagagggaatgggca
gaaaaaagctcagagtcgggttgtggaggcagtggagagcccgtcctggagagcgagcca
ccgcagattgctgatgagaacagctgcagcagtcacttctcaatttctgactgcttgagg
gctcctgaggagcctgacctcgcagaccgctcttctcagtcctcccttaacagccaggac
gatgccggtgagggtaaaggaaatggcgatggtggaaagacagggtcggcaacacgcatg
gtgacacgtctccgaaacccggaaagcaaattaagccagcgcaaggtcatgcaggacaag
gacgccagctcacaggacagcaaagcacttaaagagactcctctgctgtccagcttggtc
aggaaagacctaggcctgaagaccagctccagcagcggcttcttcaagcttggccaagaa
ggcaaattccgcgtctaccacaaccagtacagcacaaaccctctggcacttaacaaacac
cagcaccgcgaggaccacgacaagcgacggcacctctcacacaagttctgcatgacgcct
gccggagagttcaagtggaacggctcagtgcacggctcgaaaatgctgaccgtgtccacg
ctgaggcttaccatcatccagctggagaacaatatccctgcacctttcctgcatcccaac
tgggcctcacacaggtccaactggataaaagctgtccagatgtgcagcaaagcgagagaa
tttgccttggcgttggccattctggagtgtgcaattaaaccagtggtcatgctcccagtg
tggaaggattctctcggtcacacaaggctccatcgaatgaccgctatggagcgggaggag
aaggaaaaggtgaaaaagagagagaaaaagctggaggatgaagagacgatgcagcaggca
acatgggtgaaatacacgttccccattaagcatcaggtgtggaaacagaagggcgaggag
tacagagtgactggttatggtggctggagctgggtcagtaagacccatgtcccacgcttt
gtccctagattacctggaaacacaaatgtaaactatcgaaaagcacttgaagcagctaat
actggcaaggaaagtcagacatcctgcccagagaaatgccaaaacccaatccctgaaacc
ccaaaggaacactcatctagagaggagcaaacactcaaagaggaggatgaaaaaaaggga
gaaaagatggaggtggacgagaaggctgtggctaagagtgatgagcttaacaaaaatgaa
gcctctgaaaagatggacatgagcacccctgacttctctagccccagtgaagaaaaagtt
aacaataaaagcacaccctcacctttgaagaatgatcagtgtgtgaaaggggaaagtatt
gattgtgaagagtccaaagtcagtgcagcaggtcagcctcaggcgtcaattgaagatgat
gttgttaatgtcagtcagggctttcagctacgcacagcttacaagaagaagggcaaagga
tcaaagctggatggtcttctggagcggcgggtcaagcagtttgcattggaggagagacag
aggctggagaagctcaagcaagttgctgcctcaaaacccaacactgaaaatgggacaaag
gatcaggagaagacttgtccatctctgaaccaagagcttaaaactgaaggaccttctttt
gaagctacaaaaactgttctgcctgataaggcagcaatcccaatggtgaaggaaaaagat
cctgtagtacaaaagcttgagtttgaccaagatgagcaggtgacacatggttcttcagaa
cggactgaaaatcttgatgtcagacagggatccaatgtaaagactgaagcagctgcatct
cttgcagaaaaagagcagaaagtagcaccagaaccagagcacaaaacagggaatggcaca
ttaataacagacgctgagcttaatggaggttctcagaaagatttggaaggcagccttaac
ttaaacagcaaaatggcatgtccgaaatttgagggtacagagacgaaggatacaactgaa
aacagttcttccatgggagagaatggcttaagtatagaaacaaacttgccagttcatgtc
aatggcagagatggttcaatggattctctgcccacaaatatgaccaataatatcaactcg
aaagaaatgaagcagggtgaagaggaggagacagaaatgcttccttccaaggatcccata
aaatcactaatgaatggtgacctgactcaagacagccagaacgagaaagctcagcctaat
gaggagacccggatggacaagtcaaacttggagtatctgccctctcagaaggttgccaga
ctggacggcaactctgagggcatagctgattctgctattagttcttctccctcccagctt
tccccagcagaaactgtaaagtcagatgggcttagtaacagtaccaaggtatcaccaatg
gagactgaagagtccaggttgaaaactttcagcccctcgcccattctggactcaacggag
gagtccagcctaagcagtgatgttgctgagaatagcactaacagtggtagcggagtccag
accataattacgcaagtcaccactactaccactacaaccactacagtgtctgagtcacac
actgttgaagcatccagcttgctcgatggtaccactaacagtaaagcttgttcagcattg
acatcagctgaatcaaaagtggaatccaccatgtcagtctctactctttccactacaact
accaccacagttaccaaggttacaaacccatcccatggagccaaaattacagaacagtgc
aagactgttgtcacagcaacatttactgatgctaaatcagcaccctcaagtacctctgtg
acctccatcaccctgagtaaggagtactccaccagagacagagtgcggttattgaagttc
tcccgttgcaagaagacccggtctggtacggctctgccttcatatcgcaagtttgtaaca
aagagcagcaagaagagcattttcgttctcccgaacgatgacctaaagaagcttgcaagg
cgagcaggtatccgtgaggtgcctgtctttaattacaatgccaagccagctttagacatc
tggccctatccatccccaaggcccacatttggaatcacatggaggtaccggcttcagaca
gtaaagtctttggctggagtgagtctgatgttacgcctgctttgggcatgcctcaggtgg
gatgatatgtcagtgaagccctctcctgctgttggaaccacgcgcacagaaacatctgac
actgagataacgacaacagagattattaagcgaagagatgtgggaccttatggtattcgc
tcagagtattgcatcaggaaaattatttgccccctgggtgtgcctgagactcccaaagag
acccccacaccccaaagaaagggtctgcgctcaagtgctctgcggccaaagaaaccagag
ccctctaagcagacggggcccgttgtgatggagaactgggtgccagaggaggagctggaa
ctgtgggagatacgagcctttactgaaagggttgagagggaaaaggcacaagcagcagac
ccaactaaggttagtgtgcagaagacagcagaggaggtcaaggcccagttggaagctcaa
ctaaagcaacagagattggcagcccaacagaaacgtttggagcagcagaaaactggagta
accacagtccaatccagcttgagcagtacacctaccagcactgcatcttccacccagaag
gtggtggtaggttctctgaccagtcctgtcacccctgggacaaaagtggtacttgccacc
aagttaggtactccggtgcaatttcagcagggcaagaacttccagcagtcctttgcctcc
tgggtcaagcagggccaaacaagcaatacagcctccactacttccgttaccacagtggca
gcgagtagcgtcagcacgtctgggcaaacgttccagattgccgctgcctcaggcttgatg
actggcaatgtcatcaccgccaaactgcctctgccggccaacagcaagatagtcacagtg
aacgtgccaaccacgcaaggaggtgttgtccaggtgcagcagaaggttgtgggcatcatt
ccatcaagtacagcacccacggctcagtcattctcctcattccagccccgttcgggcagt
gtcaacatccgacccaacaccagcacctctacacagcaagccactactggaacccctgtc
cggcctgggatgacagtagttcgttcacccctccaacaggccacaacattgggcaagacc
atcatacgcacacctctaatggttcaacaaggtcagggtcagcaggtggtaactcagatc
atccgaggaacacctgtatcaaaggctgtaagcagcagtaccccaacgcaggtggttggt
tctccccctcgaccctccacccccgggcagccccagactccacagacacccagcagcacc
cgaccacagcaaggccaagttaaactcacccttgctcagctaacgcagctcactcaagga
gctcagggtggaaatccaggtttgactgtggtgatccagggtcaggggcagaccacaggg
cagctgcaggtcatcccacagggtgtgactgtgatcccaggtcctggtcagcagctcatg
caggcagctatgccaaatggccaggtccagcgcttcctcttcactcctatgccaccagca
ccagctactccagctcccactgtatccacacccagcacctcagccactcccgctagcagc
agcacagctacaaccaccactgccggacctacaacgccaatgcggccagcaatacaacct
gcagcccaggtctcacccatcatccaaccctccagccttccttcatctccaccttctctt
tctaaatctcaacctacgttacagccaaccaccacatcccaaacaccaacatcatctgct
ccagttcctgctctgcaaactcagttttcttcaccgcaggccccgctgcaaacacaatcc
caaatccaaccccaaactcagtcacaaccacaaagccagtcccaagcccaactacatcaa
atccagccacaagccaaaacccaaccacaaattcaaagccagctacagcaacaaccccaa
atccagccccaaccccaacctcaatcccagttgcagcaccaagttccatcacaaccccaa
tcacagctccaaatccagtctcaacagcaacccaaactccaacctcagcatcagactcaa
gcccagccacaacttcctccccaacagcaactccaaccccaactccaacttcagcctcaa
cagcagccccaacaccaggcacaacttcctccccaacagcaactccaactccagccgcta
cttcagcctcaacagcaaatccaaccccagccgctacttcagcctcaacagcaaatccaa
ccccagccacaacttcagcctcaacagcagtcccagctccacccacagcctcaacagcag
tcccagctccacccacagcctcaacagcagtcccagctccaaccacagcctcaacagcaa
tcccagctccaaccacagtcacaacagcaatcccaactccaaccacagcttcaacagcaa
tcccaactccagccacagcctcaacagcaactccaatcacagccacagcttcagtcccat
cagaaactccaaccacagccacagcttcagtcccaacagaaaccccatccccagccacag
cttcaaacccagcagcaacctcaactccatcctcagctgcaacttcagcctcagcagcaa
ccccaactccatccccagctgcaacatcagactcaacagccacaactcctgcctcaacag
ccttcccatgtccaaccgcagccacaactacagccccaacctcagtctcatttgcctgct
caaaccccagtgcagcccacttcccccttacctgtttctcatgtagcccaagtgacttcg
cccccaacacaggtagcctccattgctgtagcaccacaggtaacccagaccacggtaact
caggttcggcctcagatccagctccctgcccagcttcttagtgttccagggatccagcaa
caagtcctgtcccacatccagaaccaagtggcagcacagctccaggcccagcatggtacc
cttccccagcagatcaaactacagctgcctatccagatccagcagcagggtggaggtcag
gtgcagacacatcagatccagaatgtggtgacaattcagacaaccagcgtccaggagcaa
ctccagcgcatccagcagctgcgagatcagcagcagcagaagaagaagcagcaagaggct
aagagggagcaggctcaacaagctgccagccagagcgagctgctgcagaagcaggtggtc
atgaagcagaatgcagtcatagagcacttaaagcagaaaaaagccatgactcctgcagag
agggaggaaaatcagaggatgattgtttgtaaccaggtgatgaagttcatactggataag
attgacaaagatgaaaagcaggcagccaaaaagcgaaagcgggaggagtcagtggagcag
aagcgcagcaaacagaatgccagcaaactctcggctctgctctttaaacacaaagagcag
ctgaaagctgagatcctgaagaagagagcactgctggataaggagctacaggtggaggtg
caggaggagctgaggaaagatctgagcaagctgaggagggagaaggagaaagcccaggct
gcagcatctcaagcagctgccacagccattagtgcccagacggcctcactctcgacacac
ccctccacggttacttcacccccctccagccataaacgcaaacgagatgaggagcgcgat
gcagccctgtctaagagcaagaagaagaagatgatctccacctcgtcgaaggacagcaag
agagacacaaaactgtactgtgtatgcaaaacaccctacgacgaatccaagttttatatt
ggctgtgatctctgttcaaactggtaccatggtgagtgtgtgggcatcacagagaaggag
gccaagaagatggacgattacatctgtatggaatgtaaaagagcacaggaaggcagcaca
gaggagctctattgcatctgcagaacaccatacgatgagtcgcagttctacattggctgt
gaccgctgtcagaactggtaccatggacgctgcgtaggcattctgcagagtgaggcgact
cacattgatgaatatgtgtgccctcaatgccagtctacagaagaggccatgaccgtcctg
tccccgctcacagataaggattatgagggtttgaagcgaatcctccgctccttacaggcc
cacaaaatggcatggccatttctggaaccagtggaccctaatgatgctccagattactat
ggagtcataaaggaaccaatggatctatccacaatggaacagaggatacagaaacggttt
tacagcaagctaacggaatttgtagcggacatgaccaaaattttcgacaactgccgctat
tacaaccccagtgactcacctttttaccagtgtgccgagttcttggaatccttctttgta
cagaagctcaaagctttcaaagcaagcaggtctcataacaacaaactacagtcttcagct
tcatag
DBGET
integrated database retrieval system
