Pangasianodon hypophthalmus (striped catfish): 113528187
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Entry
113528187 CDS
T05759
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 1
KO
K17391
insulin-like growth factor 2 mRNA-binding protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113528187
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113528187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
RRM_1
MOEP19
KH_5
RBD_DEAH11
KH_Vigilin
RRM_5
RRM_occluded
RRM_9
Motif
Other DBs
NCBI-GeneID:
113528187
NCBI-ProteinID:
XP_026772393
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MALFCDFFFIGKVELHGKRIEVEHSVPKKQRTRKLQIRNIPPHLQWEVLDGLLAQYGTVE
NCEQVNTESETAVVNVTYATREQARQAIQKLNGYQFENNTLRVSYIPDESLDVDSQRSPD
NGRRSGYGARVNSRQGAPGTGMPSKHQHTDIPLRLLVPTQYVGAIIGKEGATIRNITKQT
QSKIDVHRKENAGAAEKPISIHSTPEGCSAACRMILDIMHQEAKDTKTADEVPLKILAHN
NFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGAIEACCLAEQEIMK
KVREAYDNDIAAMNQQTHLIPGLNLGALGLFPPSSSMPPPPPGNPGVCPPYGSFGAPEQE
TVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAETPDSKMRMVIVTGPPEAQFKA
QGRIYGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPRE
QTPDEQDQVIVKIIGHFYASQLAQRKIRDILTQVKQQQKGGMGGSQASHPQNLSELGPHQ
GMTQEPRRK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccttattttgtgattttttttttataggtaaagtggaacttcacggcaaacgaatt
gaagtagaacattctgtccctaagaaacaaaggaccaggaaactccagattagaaacatt
ccaccgcatttacaatgggaggtgcttgatggtctacttgcacagtatggaactgttgag
aactgtgaacaagttaacacagaaagtgagacagctgtggtgaacgtcacttatgcgact
cgggagcaggccagacaagcaatccaaaagctgaatggctaccagtttgagaacaacact
ttgcgcgtgtcctacatacctgacgagagcttggatgttgactcccagcgcagccctgac
aatggtcggcgctctggatacggtgcccgtgtcaactccaggcagggtgcccctggcaca
gggatgccctccaagcatcagcacactgatatacctctccgtttgcttgtaccaacccag
tacgtgggcgccatcatcggcaaagagggtgccaccatccgcaacatcaccaagcagact
cagagcaagattgatgtccaccgtaaagagaatgctggggctgcagaaaagcccatcagc
atccactcgactcctgagggctgctcggcggcctgccgcatgatccttgacatcatgcac
caggaagccaaagacaccaaaactgctgatgaggtgcctctgaagattcttgcccacaac
aactttgtaggtcgtctgatcggcaaagaggggcgcaatttgaaaaaagtggaacaagac
actgacactaagatcaccatctcaccgctgcaagatctgaccctgtataaccctgagaga
accatcacagtgaaaggtgccattgaggcctgctgcctggccgagcaggaaatcatgaag
aaagtgcgagaggcctatgataatgacatcgctgccatgaatcaacagacgcacctcatc
cctggactgaaccttggagcgcttggtcttttccctccatcctcctccatgcctcctcct
ccccctggaaaccctggggtttgtcccccatatggctcctttggggctcctgagcaggag
acagtccatgtgtacatcccagcacaagcagtgggagccatcatcggcaagaagggccag
cacattaagcagctgagccgctttgctggagcctccattaagattgcaccagcggagaca
cctgattcaaagatgcgcatggtcattgttactggtccacctgaggcccagtttaaggct
cagggaagaatatatggcaagctgaaggaggagaacttctttgggccgaaggaagaagtg
aagctggagacgcacatcaaagtagcagcagcagctgctggcagagttattgggaagggt
ggaaagacggtgaacgagctacagaacctaactgcagctgaggtggtggttcctagagag
cagactcctgatgagcaggaccaggttattgtcaaaatcatcggccacttttatgcaagt
cagctggcccagaggaagatcagagacattttgacacaagttaagcagcagcagaaaggt
ggcatgggaggctctcaggcatctcacccacagaacctgtcggagcttgggccccaccag
ggaatgacccaagagcctaggaggaagtaa
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