Pangasianodon hypophthalmus (striped catfish): 113528297
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Entry
113528297 CDS
T05759
Symbol
ccdc47
Name
(RefSeq) coiled-coil domain-containing protein 47
KO
K24962
PAT complex subunit CCDC47
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
phyp03110
]
113528297 (ccdc47)
04131 Membrane trafficking [BR:
phyp04131
]
113528297 (ccdc47)
Chaperones and folding catalysts [BR:
phyp03110
]
Other chaperones and cochaperones
Others
113528297 (ccdc47)
Membrane trafficking [BR:
phyp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
113528297 (ccdc47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
113528297
NCBI-ProteinID:
XP_026772577
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MRRCLLLLPALLLLLALPDTRGRYNDDFDDGEDLAEFDDNDFAEFEDVAEEPAVEAEKEP
PTRPAPSSAPEEDDEDEATVENEDGQDEFEDGDGQDQDIYSIYDNEEFEGHDTTSPSNKD
TLIYREVPAHLQNSWESYYMEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNSHRELLESN
FALVGDDGTSKEPTSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARMM
RPACDQVQIKVTLNDEDMDTFVFAVGNRKAMARMQKEMQDLSEFCGDKPKSGAKYSLPDS
LAILSEMGEVTDGVMDSKMVHYITNHADKIESIHFSDQFSGPKVMQEEGQPLKLPETKKT
LLFTFNVPGMGNTSPKDMDSLLPLMNMVIYSIDKVKKLRLNREGKMKAERNRARVEENFL
KQTHAQRQEAAQTRREEKKRAEKERIMNEEDPERQRRLEEAAQRREQKKMEKKQMKMKQI
KVKAM
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctgtctcttgctgctccctgcgctcctgctgctgctggctctgcccgacacc
agggggcgctacaacgacgacttcgatgacggagaggacctggccgagttcgacgacaac
gacttcgccgagtttgaggacgttgccgaggagccggcggtcgaggcggagaaagagcct
ccgaccagaccggcgccttcgtctgctcccgaggaggacgacgaggatgaagccacggtg
gagaacgaggacgggcaagacgagtttgaggatggagatggacaggatcaggacatttac
agcatatatgacaacgaggagtttgagggccacgatacgaccagcccctctaacaaagac
acactcatctacagagaggtcccagcacatctgcagaacagctgggagagctactacatg
gagatcctgatggtgacgggcctcctggcttacatcatgaattacattattggcaagaac
aagaacagcaggctggctcaggcctggtttaactcgcacagagagctgctggagagcaac
ttcgccctcgttggtgatgacgggacgagtaaggagcccaccagcacggggaagctgaac
caggagaacgagcacatctacaacctgtggtgctcaggacgtgtctgctgcgagggcatg
ctcattcagctcaagtttcttaaaagacaggatctgctgaatgtgctggccaggatgatg
agacctgcttgtgatcaagtgcaaatcaaagtaactctgaacgacgaggacatggacacg
tttgtgtttgcagtgggaaaccggaaggccatggcgcgcatgcagaaggagatgcaggac
ctgagtgagttctgcggggacaagcccaagtcgggggcgaagtacagcctccctgactct
ctggccatcctatcagagatgggcgaggtcacggatggagtgatggacagcaagatggta
cattacatcaccaaccatgccgacaaaatagagtccatccatttctcggaccaattttct
ggtccaaaagttatgcaagaggagggtcagcccttaaagctccctgagaccaagaaaacg
ctgctgtttacatttaacgtgcctggaatgggtaacacttctcccaaagacatggacagc
ctgctgccactcatgaacatggtgatctacagcatcgacaaagtcaagaagttacgcctc
aacagagaggggaagatgaaggcagaacggaaccgcgcccgtgttgaggagaacttcctg
aagcagactcacgctcagaggcaggaagctgcacagacacgtcgggaggagaagaagaga
gcggagaaagagaggatcatgaacgaggaggaccctgagagacagcgtcgcctagaggag
gctgctcagcgtcgagagcaaaagaaaatggagaagaagcagatgaagatgaagcaaatt
aaagtgaaagccatgtaa
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