KEGG   Pangasianodon hypophthalmus (striped catfish): 113528300
Entry
113528300         CDS       T05759                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113528300 (atxn2l)
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113528300 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 113528300
NCBI-ProteinID: XP_026772581
LinkDB
Position
Unknown
AA seq 1059 aa
MSFRRQNQQSGPSGRKTSNGPSGSAGMSPTVPGSNTTRPAPGRNRNSVKPPSQSPPVFEG
VYNNSRMLHFLTAVVGSRCDVRVKNGSVYEGIFKTLSSRCELAVDAVHKLRTEDGDGCGG
GTSTHPRREEITDTMIFSPSDLITMTCRDVDLNYATRDTFTDSAISSSRVNGDHREKVLQ
RWDGGDSNGENYDLDTDTSNGWDASEMFRFNEETYGVKSTYDSSLSMYTVPLERGSSEGF
RQREARAAQLASEIEASSQYRHRVALENDEGRSEEDKYSAVVRHGGERERGRDSPGFSNS
GSREGKYIPLPQRAREREIGASRSDRERGGPSSALPNRTNRPAPSSSSPRPPLPSGSGQP
TPPSDRNSPLSIRGGYSPHQAQCSPPAQPRPLEAGHASPPAPHLLPHSLSHPQSLSESAR
PVNGVSSRTSPKSQRPAQPRSLRTSNSHSSPTVSHSPKPDAPNQDPPLTGPTYLDTSSVN
MVTPKPSGPTPLFPVDVFSPFLCSVHLFSFFLFVQLFVSVNEILSKERTESPASPQEGKG
SKAASLQQRSQIEELRKFGKEFRLHSSSSPSSPSTSATPSDPAQPSPTQSTQTDSTPSTE
SKTISPTAPSQELPSDEAGRETSAEGPAAATPPSVTPTVTPSATPGGVSQPSGTDGQTAV
PPQPARTPGREDGRPEAADRAEGVADQVKKSTLNPNAKEFNPAKAPVTMVKPSATPTTPR
PTPPSPSVVLQPPAGQGAIYSPQYLSYVSTIPLQGHSVQAPQMYQYAVSTVSQGKYPRAK
GSVVAPRPDHNSSAPPMIQAAASAAGPPLVASPYPQSYLQYSQVIPAMPHYPGQPVYSML
QGGARMLSSGGHPQTLGPPGPQYPGQTEGPPGAQQGMYAPQSFSHHSGSMHPPQPSTTPT
GSQPPPQHPAPSPGQSGQSGPQPQTLYHSAPLSAPTPPNLPPGHSSPQASYPLQGYSLPG
HQPLPHPYQSIGQLTQAHVQGALSGPHHSGGHGPPPMMLLHAAPPPPQQGSGPGPQHPTH
APPPPQQGTHQHYTYIGHPPAVQVQPHPPQQMPFHPPGN
NT seq 3180 nt   +upstreamnt  +downstreamnt
atgtctttccgccgccagaatcaacagtctggaccaagtggccgcaaaacgtctaatgga
ccttctggatcggccggcatgtcaccgacagttcctgggagtaacactaccagaccagcc
cctggaaggaacagaaactctgtgaagcctccctcacagtctcctcctgtgtttgaggga
gtctacaataactcccggatgcttcatttcctcacagctgtagtgggctctaggtgtgac
gtgcgggtgaagaatggcagtgtgtatgaggggatctttaagacactaagttcaagatgt
gagctggcagtggatgccgtgcacaaactaaggactgaggatggggatggctgtggaggt
ggtacatccacacaccccaggagagaggagatcacagacacaatgatctttagccccagt
gatttgatcaccatgacctgcagagatgtggatctcaactatgctacacgagacaccttt
acagactcggcgatcagctcgtccagagtaaacggtgatcacagagagaaggtgctgcag
aggtgggatggtggagacagcaatggagagaactatgatctagatacagacacatctaat
ggttgggatgccagtgagatgttccgtttcaatgaagaaacatatggggtgaagtccacc
tatgactcaagcctctcaatgtacacggttcccctggagcgaggtagctcggagggtttc
cggcagcgagaggcgcgagctgcacaactggccagtgagattgaggccagttcacagtac
cgccacagagtggcgctggagaacgatgaagggaggagcgaagaggacaagtacagtgct
gtggtgcggcatggaggcgagagagagagggggagagacagccctggcttctccaactct
gggagccgggagggcaaatacattcccttaccccaaagagcgagagaacgagaaattggt
gcgtccagaagtgatcgagaaagaggaggaccctcctccgcacttcctaatcgaacaaac
agacctgccccctcaagctcgtcccccaggccgcctcttccctctggcagtgggcagccc
acgccgccttctgataggaacagtccgttgtcaatcagaggtggatactctccccaccaa
gcacagtgtagcccacctgctcagccccgacccttagaggcaggccatgccagtcctcct
gccccacacttgctcccccattccctttcacaccctcagtctctctctgagtctgcacga
cctgttaatggagtgtcatctagaacatctcccaaatctcaaaggcctgcacaacccaga
agcttgcgcacgtccaactctcactcttcacctacagtctcacattcccctaaacccgat
gcacccaatcaggatccccctctgactggtcctacctacctggacacctcttcagttaac
atggtgaccccaaagccctctggccccaccccactcttccctgtagatgttttctctccg
tttctgtgttctgttcatttattttcattttttctttttgttcaactttttgtgtcagtg
aatgagattttatccaaggagaggacagaaagccctgccagtcctcaggaaggcaagggc
agtaaagctgcctcacttcagcaaaggtcccagatagaggaacttcgcaagtttgggaag
gagttcagacttcactctagctcctcgccctccagccccagtacttcagccacgcccagt
gatcctgctcagccaagccctacccaaagcacgcagacagactccaccccctccacagag
tccaaaacgatatcgcctacagctccatcacaggagcttccgtcagatgaagcaggcagg
gaaacgagtgctgagggtccggctgcagccaccccaccatctgtcacgcccaccgtcaca
ccttctgccacacctggtggtgtttcccaaccctctggtacagatggacaaacagcagtg
ccgccccagcctgcgaggacaccaggcagggaggacggcagaccagaggccgcagacaga
gcggagggtgtagccgatcaagtgaagaagtccacattaaatcccaatgccaaagagttc
aatcctgccaaggcccctgtcactatggtgaagccttctgcaactcccacaactccacgg
cccacacctccaagcccctcagtggtgctccagcctcctgcaggacaaggagccatctat
agtcctcagtaccttagctacgtttcaacaatacccttacaaggccactctgtgcaggcc
ccgcagatgtaccagtatgccgtgtctaccgtgagccagggaaagtaccccagagctaaa
ggctcagtggttgcccctcgtccagaccataactcctcggcgcctcctatgatccaggca
gcagcatcggcagcaggtcctcctcttgtggcttctccttatcctcagtcttacctgcag
tatagccaggtcatccctgctatgccacactatcctggacagccggtgtattccatgctg
caaggtggagcacggatgctgagttcagggggacaccctcagactcttggacctcctggt
cctcaataccccggccagactgagggaccgccaggagcccagcagggcatgtatgccccc
cagtcattctctcatcactcaggctccatgcatcctccgcagccctccaccactcccaca
ggcagccagccgccccctcaacaccccgcccccagcccaggacagtctggtcaatcaggt
ccacagccacagaccttgtatcattctgctcccctgtcagctcccactccccctaacctg
cccccaggccacagctctccccaggcctcataccccctccagggctacagcctgccagga
caccagcccctaccccacccctaccagtccattgggcagctcacacaggctcatgtccaa
ggagcactgtcgggtcctcaccactctgggggtcatgggcctcccccgatgatgctgctt
catgctgctcctcctccccctcagcagggttccggtcctggcccccagcaccctacacat
gcacccccaccaccccaacaaggaactcatcagcactacacctacatcgggcacccgcca
gctgtgcaggtgcagccccaccctcctcaacagatgcccttccaccctcctggaaactga

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