Pangasianodon hypophthalmus (striped catfish): 113528409
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Entry
113528409 CDS
T05759
Symbol
msx1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113528409 (msx1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
113528409 (msx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
113528409
NCBI-ProteinID:
XP_026772744
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MKREDVTSSHDDMQRVKPGAAVLPFSVEALMAERTPSRADKSAGARARCCCEDGSSFSFS
CSVARDGDASLQAESPERADRSSWTENSRFSPPPLPPPPPPPPRRLSPPACPLRKHKTNR
KPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEA
ELEKLKMAAKPMLPPGTFGISFPLGAHVPASYGAGGGAHAFQRPSVPVSPVGLYAAAHMG
YSMYHLA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgaggacgtcacttcttcgcatgacgacatgcagcgcgtgaagcccggagcc
gccgtgctgccgtttagcgtggaggcgctgatggcggagcggacaccgagccgggctgac
aaaagcgccggggcgcgcgcgcgctgctgctgcgaggacggatcctccttctccttctcc
tgctcggttgcgcgcgacggagacgcgtcactgcaggcggagagccctgagcgcgcggac
cggagctcgtggacagagaattcccgtttctcccctcctcctcttcctcctcctcctcct
cctcctccaaggcgcctcagtcctcctgcatgtcccctgaggaaacacaagaccaaccgg
aagcctcgcaccccgttcaccacgtcacagctgctggcgctggagcggaagttccggcag
aagcagtacctgtcgatcgcggagcgcgcggagttctccagctcgctcagcctgacggag
acgcaggtaaagatctggttccagaaccggcgcgcgaaggccaagaggctgcaggaggct
gagctcgagaagctgaagatggccgccaagcccatgctgcccccgggcactttcgggatt
tcctttccgcttggagcgcacgtgccggcatcgtacggagcaggcggcggcgcgcacgcg
tttcagagaccttccgtgcccgtttcacccgtcggactgtacgcagccgcgcacatggga
tacagcatgtatcacctagcatga
DBGET
integrated database retrieval system
