Pangasianodon hypophthalmus (striped catfish): 113528433
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Entry
113528433 CDS
T05759
Symbol
usp43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113528433 (usp43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113528433 (usp43)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113528433 (usp43)
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113528433 (usp43)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113528433 (usp43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
113528433
NCBI-ProteinID:
XP_026772766
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MEKREQQVKGTSRKSKATKHKDKKRAVGKPFRKKSFKSVGTFVARIFKSLGAWTHSREPL
DAEDDDGGFRVAAPCTNSATVKEDERDRVVKTSTLQSRSSLKDRLSFSYGDKTPGVLGLK
NHGNTCFMNAVVQCLSNTDLLAEYLGLEHYKMDIGENMMNHADKVRRDDAQLAPGEVTEQ
LAALVRALWTLEYTPQLSVEFKMIVSKYGSQFRGNSQHDALEFLLWLLDRVHEDVNSSLS
SPSGNNRIKPNGKDNAGGEELAISELPDQQPGVRHSFVQEHFQAQYKSSLTCPHCLKQSH
TFDPFLCISLPIPLRQTRPLCVTLVFSTKGQRYLRVGLAVPLFGSLACLRRMVADEGKIS
PDQVILTEIYTTGFQRSFFDEDDLTSIAENDIIYAFQAPPLYIRGGSTRISGYHHSLPSS
PYSSSGPEAQRLAASGALSSEFLNHGGGTAKILLLVCNAAGVGQQAVRFGPPFLMREDRS
VSWDQLQQSILSKLYYLMISGAQPQNNRVLFKIRVVGGSVSCSYLSPQDGRPLYHPAVDR
ALKLCGSGGPPHVKLIVEWEHRIKDCLFGNIQEEVVKDCESVRTQQQQHVQQHSCTLDEC
FQLYTKEEQLAPDDAWKCPHCKQLQQGMVQMSLWTLPDILILHLKRFRQVGERRNKLSTL
VRFPLTALDMAPHMVKRSNCTRLPSTWKQQLHQRTETGQHPEDFLYDLYAVCNHHGGMHG
GHYTAYCRNSVDGQWYDYDDSSVEPVPEGEVCTRGAYILFYQRRNSIPAWSASCSLRGST
SSSMSNHWLVRLTSVSEESQTLSLTTKASSCSSAPEPQTPTSPVFYEQPKGDADGFESRP
FVRGTQGRSVSLRSPTKNKDNLSKVLPLRWSFGSKDRKKVTSVPQTTPPRPGELVEYLES
GRRPRCTKEPIVSLVASPAQGKAQLPVEDSLSSPSGSSSFSGAERGSCREPDSPRVPEGQ
SRPASDRGTTKGRDEGLLARKASKRRQEQHGKTQDGQSRRESAAGLQPGTSTGQSFANST
SESKDSTLKRVWNQPAGATRTLCSQNQQDDVAGSRNEETQGIPAFLMPSNVKKDSQSKDI
RAKEAGQGRTLTNKSSNKLSMSNGTPNGLVVEEKKGSGTQRCSSARYYNKTLTNGRETHS
GGGGDIKRALSSSSLQSRLDPNLRRTVSLQRNGLMVPPQKGHTTDKPSYNTLQRNRYSTT
SLGRQRPVPESCF
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcgcgagcagcaagtgaaagggacatcgcggaaatccaaggccactaagcac
aaggataaaaagcgcgctgttgggaaaccgttccgtaagaagtcttttaaatcagtcggg
actttcgtggcgaggattttcaaaagtttaggcgcctggactcacagcagggagccgctg
gacgcagaggacgatgacggcggattccgggtcgcagcgccttgtaccaattcagcgact
gtgaaagaagacgagcgggaccgtgtagtgaaaacttcaacccttcagtcgcgctcttca
ctcaaagaccggctttcgttctcttatggcgataagacacccggtgttctgggtctgaag
aatcacgggaacacctgcttcatgaacgcggtggtgcagtgcctgagcaacaccgacctg
ctggctgagtacctcgggctggagcactataagatggatataggggaaaacatgatgaat
cacgcggataaagtgaggcgtgatgacgcgcagctcgcgccgggagaggtgactgagcag
ctggcggcgctcgtgagggcgctctggacgctggagtacaccccgcaactctcagtggaa
tttaagatgattgtgtccaagtatggttctcagttccgagggaattcccaacacgatgct
ctggagttcctgctgtggctgcttgaccgcgtccatgaagacgtcaactcctcattatcg
tctccaagtggaaacaacaggatcaaacccaatggaaaggataatgcaggaggggaagaa
ttagctatctctgagcttccagatcagcagcctggtgtacgtcacagctttgtacaggag
cacttccaggcccagtacaagtcatctctgacatgtcctcattgccttaagcagagtcac
acctttgatcccttcctttgcatctctcttcccatccctttgcgtcagaccaggccactg
tgtgtgactctggtgttcagcactaaagggcagaggtacttaagagtgggactggctgtg
cctttattcggctctctggcttgcctgcgcagaatggtggcagatgagggcaagatttcc
ccggaccaagtgattttgactgaaatttacactactggtttccagcgctctttttttgat
gaggatgacttgaccagcatcgcagaaaatgacatcatttatgccttccaagccccaccc
ctttacatcaggggaggatccactagaatatcaggctaccaccacagtctcccttcttcc
ccatactcctcatctgggcccgaggctcagagactggctgcatccggggcactctcctcc
gagttcctcaaccatggaggtggaacagcaaagattctcctgctggtgtgtaatgcagct
ggagtaggccaacaagctgtgaggtttggtcctccattcctgatgagagaggacaggtca
gtatcatgggatcagctgcagcagagcatcctcagtaagctctactacttgatgatcagt
ggagcacagccacagaataacagagtcctgtttaagatccgtgttgttgggggatcagtg
tcctgtagctatttgagtccacaggatggacgtccactttaccatcctgcagtagacaga
gctctaaagctgtgtggctctggcggtcctccacatgtgaagctcattgtagagtgggaa
cacagaataaaagactgtctctttggtaacatccaggaagaggtggtgaaggattgtgag
agtgtacgtacccagcagcagcaacatgttcagcagcatagctgcacactggacgagtgt
tttcaactttatactaaagaagagcagctggctccagacgatgcgtggaagtgtcctcac
tgcaagcagctgcagcaaggcatggttcagatgagtctgtggacactcccagacatcctc
atcctccacctcaagcgcttcaggcaggtgggcgaacgacgaaacaagctctccactctg
gtgcgcttccctctcacagccctggacatggcaccccacatggtcaagaggagtaactgc
acccgcctgccttccacatggaaacagcagcttcatcaaaggactgaaacaggacaacat
cctgaggacttcctgtacgacctgtatgctgtgtgtaaccatcatggaggcatgcatgga
ggtcactacacagcatactgcaggaactcagtggatggccagtggtacgattatgatgac
agcagcgtagagccggtgcctgagggggaagtgtgtacacgtggggcttatatcctcttt
taccagagacgcaacagcatccctgcatggtcagctagctgctcactccgaggctctaca
agctcctccatgtctaatcactggcttgtccgtttgacatctgtgtcagaagaaagccaa
accttgagtctcacgaccaaggcctctagctgctcctcagctcctgaacctcaaacgcca
acttctcctgttttctatgagcagccaaaaggagatgctgatggatttgagtcaagacca
tttgtccgtggcacccagggccgtagtgtaagcctgcgttcacccaccaagaacaaggac
aacctgagcaaagtgcttcctctacgttggtcttttggttccaaggaccgtaagaaagtc
acttctgtccctcagaccacaccaccacggcctggagaactggtggagtacctggaatct
ggacggaggccacggtgcaccaaggagcccatagtgagcctggtggctagtcctgcacaa
ggtaaagcccagcttcctgtggaagactcgctcagctcccctagtggcagcagcagcttt
agtggagcggagcgaggaagctgtcgtgagccagactcccctcgagtacctgaaggccag
agccgaccagcttcagacagaggcactactaaaggcagagatgaaggtttactagccagg
aaggcttcaaagaggaggcaagagcaacacggaaagactcaagatggtcagtctcgtcga
gaatccgctgctgggcttcagcctgggactagcacaggtcaaagttttgcaaacagcaca
agtgaaagcaaagattccacattaaagcgagtttggaaccagccagctggagctaccagg
actttgtgtagtcaaaaccagcaagatgatgttgcagggagcaggaatgaggagactcag
ggcatcccagcattccttatgccaagcaatgttaagaaagacagccagtcgaaggacata
cgtgccaaagaagcaggtcaaggaagaacgctaacaaataagagctcgaacaagctgtcc
atgtccaacggcactccaaatggactggtagtggaggagaaaaaaggcagtggcacccag
aggtgcagcagtgcacggtactacaacaagactctgaccaatggaagggaaacccacagt
ggcggtgggggggatattaagcgagcgctgagctcttccagccttcaaagcaggctggat
ccgaatctgaggaggacggtgtccctccagaggaacgggctcatggttcctcctcagaag
ggacacactactgataaaccgtcctacaatacactgcagaggaacagatatagcaccact
tcactaggcagacagagaccagtgcccgaatcctgtttctga
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integrated database retrieval system
