Pangasianodon hypophthalmus (striped catfish): 113528441
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Entry
113528441 CDS
T05759
Symbol
traf7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113528441 (traf7)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113528441 (traf7)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
113528441 (traf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IP5PC_F
WD40_like
Beta-prop_SPT8
Beta-prop_DCAF4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
Beta-prop_EIPR1
zf-C3HC4_4
Sina_ZnF
Beta-prop_IFT140_2nd
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
zf-C3HC4_3
zf-TRAF
zf-RING_5
DUF1664
WDR90_beta-prop_4th
DUF16
Filament
EzrA
DUF641
DUF4164
U-box
KxDL
Motif
Other DBs
NCBI-GeneID:
113528441
NCBI-ProteinID:
XP_026772776
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MSSGKTSHYSHLSGEATSTASISACSSDINHTVRMESTFGPTFSGVAPVSKAETSSNYKQ
HRRTPSTSSTLTFSARDDDDGMPPIGTSRGSDSAISVRSLHSESNMSLRSTFSLHEEEED
TDPQVFAEQPSVKLCCQLCCNVFKDPVITTCGHTFCRRCALTSEKCPVDNSKLTVVVNNI
AVAEQIGELFIHCKYGVRPTASGKPTAFEVDPLGCPFTIKLSTRKDHEVSCDYRPVRCPN
NPSCPPLLTMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLEACKFEGLKEFLQQTD
DRFHEMQVTLAQKDQDISFLRSMLGKLSEKLDQLEKNLELKFDVLDENQSKLSEDLMEFR
RDASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSTGDLLFSGS
SDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTI
RAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNHLYS
GSYQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTL
TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGR
LFSGAVDSTVKVWTC
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagctctggtaaaacgtcgcactacagccatttatcaggagaagcgacatccactgca
agcatcagcgcctgttcgtctgatatcaaccacacggtcagaatggagagcacattcggg
ccgacgttttcaggagttgccccagttagcaaagctgagacatccagtaattataaacag
caccgtcgaacaccttctacctccagcacgctgactttctccgctcgagacgatgacgac
ggcatgccacccatcggtacttcacgtggttcggactcggccatctccgttcgttctctt
cactcggagtccaacatgtccctgcgctcaactttctccctgcatgaagaagaggaggat
acggatccgcaggtttttgctgagcagccttcagttaaactgtgctgtcagctgtgctgt
aacgtgtttaaagaccccgtcatcaccacatgtgggcataccttctgcaggcgatgtgcc
ttaacctccgagaaatgcccagtggataactcgaagctcaccgtggtggtgaacaacatt
gctgtggccgagcagatcggtgaactcttcattcactgtaaatatggtgtacgtcccacc
gcttcaggaaaaccaactgcctttgaggtggatccactcggctgccctttcaccatcaaa
ctcagcaccagaaaagatcacgaggtgagctgtgactaccggccggtgcgctgcccgaat
aatcccagctgtcctcccctgctcactatgaacctggaggctcatctgaaggagtgtgaa
cacatcaagtgcccacattcaaaatacggatgcacgttcattgggaatcaggacacgtat
gagacgcacctggaggcgtgtaagtttgaggggctgaaggaattcctgcagcagacagac
gatcgcttccatgagatgcaggtgactctggctcagaaagatcaggacatttccttccta
cgctccatgctgggcaaattgtcagaaaaacttgaccagctcgagaaaaacctggagctc
aagtttgatgtgctggatgagaaccaaagtaaactaagtgaagatctgatggaatttcgt
agagacgcctcgatgcttaacgatgagctttcacatattaatgccaggcttaacatgggc
atcctcggctcctatgacccgcagcagatcttcaagtgtaaaggcacatttgtgggtcat
cagggtccggtgtggtgtttgtgtgtttactccaccggtgacctgctcttcagcggctcc
tcagacaaaaccatcaaggtttgggacacttgcaccacatacaagtgccagaaaactctg
gagggccacgatggcattgtgttagcgctgtgtattcaggggaataagctgtacagtggc
tcagcagattgcaccatcattgtttgggacatccagaacttgcagaaagtgaacacaatc
cgtgcacatgataacccagtgtgcacgctggtctcgtcacacaacatgctcttcagtgga
tcgctcaaagcaattaaggtgtgggatattgtgggcacggagctgaagctgaagaaagag
ctcactggtctgaatcactgggtgcgagctctggtcgcatctcagaatcacctctatagt
ggttcctaccaaaccattaagatttgggacattcgttctcttgagtgcgtccatgtcctc
cagacctctgggggcagcgtttactccattgcggtcaccaaccaccacatagtgtgcggc
acgtatgagaacctcatccacgtgtgggatatcgagtctaaagagcaggtgcgcacacta
acgggacacgtagggaccgtttacgctctggccgtcatttccactccggaccagaccaaa
gtgttcagtgcctcctacgatcgctcacttagggtgtggagtatggacaacatgatctgc
acgcagactctgctgcgtcatcaaggcagcgtcaccgcactggccgtctctagagggcgc
ctgttttctggagccgtggacagcactgtgaaggtgtggacctgctaa
DBGET
integrated database retrieval system
