Pangasianodon hypophthalmus (striped catfish): 113528457
Help
Entry
113528457 CDS
T05759
Name
(RefSeq) rho GTPase-activating protein 23-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113528457
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Others
Others
113528457
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
113528457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PH
PDZ
PH_9
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
113528457
NCBI-ProteinID:
XP_026772812
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MLTAGGLPVVMPAATACPRLGATAWSFWDVVGVDCSAPEPRCIWVAVFRDDSLITHTSNS
ESAPTRPRTASCEKRAKGRRDGISSSSDNPRPVLGGGAEGRGVSWQGPRTLVLHKNSQGF
GFTLRHFIVYPPESALHTSLKDDENGNGKGLQRSRLEPMDTIFVKNVREKGPAHQAGLCT
GDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPKDEDVLQLAYSHDAYLKGNTPFT
GGAQNLPTPPPLCYPPRSQPHPSHTPCPAPSRSPHMGQNQLDNWSRWPGSASSPSPPLDN
RTSVPTTTSMAWASEGREPGGVSHSSPAHRTEEIRYGMTERGRSFSSSTSTSPPHHTHHG
NNSKDNLSWGSPPKPASVSSSCRSERTQQALTNWYYNQVSERERERSTVRSLHQRQRSFS
QDRLGELSRSRRTHRTDFPQSASHDTLLHQGQHPHWMQVMPSACQNRSRSENLLRSRYGH
SGRSLEALDQVLCPLSPHRERQAWQQQPQRQGSHFSSAQTPPSARRVQVHRQHQSQSSEQ
HRCQQHSPQQHQHPPKHQNQMHSSQHPPQSRRLTSCQSVDQEQIGYRSYSPSFNRKSGRI
LQHAQSFRDPSYTGPRLSWTSLPEGMAPSPAPSPAPPTCSVSGEGQDGTHRPTNHEREGG
ETELEIQAQVQEVVLRQKPPMGRRAGHVHRLPLALDGSDPLLFTSDPEEALLKSEGSSSQ
RRANGNLAPLSVEDDSLASIPFIDEPTSPSADLRACHVPASSVVSSGGLKSASAVGTSPA
SPTFTFPLSRLSSHDCSSIKSSRRSSYLLAITTERSKSCDEGLHTLRDDGRVFSRLPKRV
KSFFGDGSLDSLTVADEARSKRHSASELGSISYSDVRKEGWLHYKQIHTEKGKKVGSAIR
PWRRVFSVLRFGALYLYKDKREALLKGAALGGGSEDEQPIRLRGCLVDIAYSETKRKNAL
RLTTQDFCEYLLQAEDRDDMLEWIRVIRESSKTDSEELGFTRQALINKKLNDYRKQSPTG
NKPDSSPRVPRMTFLLTKADTSSAPPRSPKHEPKEESSPPKSPWGINFMKKAKKADPKAF
GVRLEDCQPACNNKFVPLIVEICCGLVEEMGLEYTGIYRVPGNNAVVSSLQDQLNKGSDI
NTTEERWQDLNVVSSLLKSFFRKLPEPLFTDDKYNDFIDANRMENPSDRLKTLKKLIHDL
PDHYFHTLKFLIGHLKTVANHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYK
IVETLIQHYAWFFSEEHDKDEKTPVDTEEVQPAPNIDHLLSNIGRAGLLGEISDSTNSDS
AKSKGSGGSKRDLTAKDFLTTLAIMSAVTRRRRKRPVARLLGSSTDDDSEQEPIRADLTV
EGEGEGKETERCESDTAPRAEAEEDEDEEEEEDDEENVEVTMASPGKDKPGMPCEEEAHS
VILSEEEDQRLETKGRGWRGDDARSIVSGYSTLSTLGRSLASEGRGDDADDEQSELVSET
DNESGFASRSLTQERPEKRTPPPSNTHTSPEPTAPRSFLYTHCKPSIPTPTPAPTSIPAP
PPAPSKRPTPEPVEKGTESAARSSTPSTSSSTASQRLQNRPSFNSHRLIQCDTLARRRLK
AEKAKARSLDPLEVCSASPTEDEQQANKGRTRTSLPESSPSHSPKLTPSSGHLLALPPAL
GSTSGSASQASLAEQVRARLLGSVEDMRSVGLRKPLSPETRRRRRAWRRHTVVVSSTDSS
RKSTQVSSAVNNNNKPPAPPPKPFVLIRRPGEKPILVPQRSAADAPSSHRAPPTSQFHEC
L
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgttgacagcgggtgggttgcctgtggtaatgcctgctgccactgcatgtccacgactc
ggtgctacagcgtggagtttttgggacgttgtgggggtggactgtagcgcccccgagcca
cgctgcatctgggtggccgtgttccgggacgactccctcatcacacacacttccaacagt
gagtctgcaccgactcgacccagaacagcttcatgtgagaaaagggcaaaggggcgaaga
gatgggatctcgtcatccagtgataaccctcggccagtcctggggggaggagctgaaggc
aggggtgtgtcctggcagggcccgcggacactggtgctccataagaactctcagggcttc
ggattcacactgcggcacttcattgtatacccccctgagtcagccttgcacactagcctc
aaggatgatgaaaatggaaacggaaagggtctacagcgaagtcggctggaaccaatggac
accatatttgtgaagaatgtgagggagaaaggccctgctcaccaggctggtttgtgtaca
ggtgacagattagtaaaggtgaatggggagagtgtgttgggtaagacatactcccaggtg
atagcactaattcaaaacagtgagagtgtgttggagctctccataatgccaaaggatgag
gatgtactgcagctggcgtactctcatgatgcctacctgaaagggaacacgccatttaca
ggaggggcccaaaatcttcctacaccgccccctttgtgctacccaccacgttcccagcct
catccaagccacactccctgccccgccccttctcggtccccccacatgggacagaaccag
ctggacaattggagccgctggcccggctctgcatccagcccatccccaccacttgacaac
cggacaagtgtacctaccaccaccagtatggcctgggcatcagagggccgtgaaccaggg
ggtgtcagccacagcagccctgcccatcgcacagaggaaatccggtatggtatgactgaa
agaggacgttcattctcttcctcaacttccacaagtccaccgcaccacactcaccatggg
aacaacagcaaggacaacttgtcatggggcagcccgccaaaacctgcatcagtgtcaagt
tcatgccgcagcgaacgcacccaacaagccctcactaactggtactacaaccaggtgtca
gaacgggagcgggaacgctcaactgtccgctctctacaccagcgacaacgcagtttctct
caggaccgtctgggagagctaagccgaagcagacggacacataggactgattttccccag
agcgcctctcatgacacgttgctgcaccaagggcagcatcctcattggatgcaggtaatg
ccttctgcctgccagaaccgttctcgctccgagaaccttctccgcagtcgctacgggcac
tcgggtcgctcattagaggctctagaccaggtactttgcccgctctcgccacaccgcgag
agacaagcctggcagcaacagccccagaggcagggaagccattttagctcggcacagacg
ccacctagtgcccgtcgtgtgcaagttcatcgccaacaccaatcccaatcttcagagcag
caccgttgtcagcaacactcaccccaacagcaccaacaccccccaaagcatcaaaatcaa
atgcattcatcacaacatccaccgcagagccgccgtttgacctcgtgccagagtgtggac
caggagcagattggctaccgcagctacagtccctctttcaaccgcaagagtggacgaatt
ctgcagcatgcccagtcgttccgggacccgtcctacacgggcccacgcctcagctggacc
agtcttccagagggcatggctccatctcctgctccatcacctgcccctcctacttgttca
gtgtctggtgaaggacaggatggaactcatcgtccgactaaccatgaaagagagggcggg
gagacagagctggagatccaagcgcaggtccaagaggtggtgctaagacaaaagccaccc
atgggccgaagggctggccatgtccaccgactccccctggcacttgatggcagtgaccct
ctacttttcacctcggaccctgaagaagccctgctcaagtcagagggttcttcctcccag
cggcgtgcaaacggtaatctagcaccgctctctgtggaggatgactcgctggcctctatc
cccttcattgatgagccaaccagcccgagcgcagatctgcgggcgtgtcacgtccccgcc
tcgtccgtcgtgtccagtggcggccttaagtccgcctccgctgtggggaccagccccgcc
tccccaaccttcaccttccccctcagccgcctctcttcccatgactgcagcagcatcaaa
tccagtcgccgctcttcctatctgttggccatcaccaccgagcgctccaagtcatgtgac
gagggactccacactctcagagacgatgggcgggtcttctcgaggttgccaaagagagtt
aaaagcttcttcggtgatgggtctctggacagcttgacggtggctgacgaggctcgctct
aaacgtcactctgcctcggagctgggcagcatcagctacagtgacgtgaggaaagaagga
tggctgcactacaaacaaatccacactgagaagggcaagaaggtgggcagtgccattcgt
ccctggaggcgggtcttctcagtgttgcgcttcggtgcactctacctctacaaagacaaa
cgggaggcgctgctgaaaggtgccgccctgggaggcggatccgaagacgagcaaccaatc
agactccgcggctgcctggtagacattgcgtacagcgagacgaagcgcaagaatgcgctg
cgactgaccacgcaggacttctgcgagtacctgctgcaggctgaggaccgagacgacatg
ctggagtggatcagagtgatccgggaaagcagcaagactgacagcgaggagttgggtttc
actcgacaagctctcatcaacaagaaactgaatgactacaggaagcagagtccgacaggt
aataagcctgactcatctccccgagtgccacgcatgaccttcttgctcaccaaggctgac
accagcagtgcgcccccacgctcgcccaaacacgaacccaaagaggagagcagtcctccc
aagtctccatggggcatcaacttcatgaagaaagcgaagaaggcggacccgaaagcgttt
ggagtccggctggaggattgccaacccgcctgcaataacaagtttgttcccctgattgtt
gagatctgctgtggcttggtggaggagatgggtctggagtatacaggaatctacagagtg
ccaggtaacaacgctgtggtgtccagcctgcaggatcaactcaacaagggcagtgacatt
aacactacagaggagcggtggcaggacctgaacgtggtgagcagcctgctcaaatctttc
ttccgcaagcttccggagcccctctttactgatgacaagtacaatgacttcatcgatgcc
aatcgtatggagaatccaagtgacaggttgaagaccttgaagaaactgatccatgatttg
ccagatcattacttccacactctgaagtttctaattggtcatctgaagactgtagccaat
cactcggagaagaataagatggagcctcgtaacttggcactagtgtttggacccactctc
gtgagaacatcggaggacaacatgacagacatggtcacccacatgcctgaccgctacaag
atcgtcgagactctcatccaacattatgcctggttcttcagtgaggaacatgacaaggat
gaaaagacgccagtggacacagaggaagttcaacctgcccccaacatagaccacctctta
tcgaacattggccgagctgggctcctgggcgagatctcagactcaaccaacagtgattca
gcaaaatcaaagggctcgggaggatcgaaacgtgacctcacagccaaggacttcctgacg
acgctggccatcatgtctgctgtgactcgaaggcgcagaaaacgacctgttgcccgcctc
ctgggcagcagcactgacgacgactccgaacaggagccaatcagagccgatctcactgtg
gagggagagggggagggaaaggagacggagcggtgtgaatctgacacggctccgcgtgca
gaggcagaagaagatgaagatgaggaagaggaagaagatgatgaagagaatgtggaagtg
actatggcctcgccaggcaaggacaaacccggaatgccttgtgaggaagaagcgcactca
gtgatcctcagtgaagaagaggaccagaggttggagacgaaaggtcgcggctggagaggg
gatgatgcacgttctattgtctcgggttactccactctctctacgctggggcggagttta
gcatctgaaggccggggtgatgacgcagatgatgagcagagcgagctggtgagcgagacg
gacaatgaaagcggctttgcctcacgctctctcactcaggagcgtcctgagaaacgcaca
ccacctccatcaaatacacacacctcaccagaaccgactgcaccacgcagcttcctgtac
acgcactgcaaaccctccatacctactcctactcccgctcccacttccattccagctcct
ccacccgccccttccaaacgccccacccctgagcctgtagaaaaaggaactgaaagtgca
gcacgctcctccactccctccacttcctcttccactgcctcccagcgcctccaaaaccga
ccctccttcaactcccatcgcctcattcagtgtgacactttagcgcgccggcgcctaaaa
gcagaaaaggccaaagctcgttcactagatcctttagaagtctgtagtgcttcacccacc
gaggatgaacagcaggccaacaaagggcgaacgagaaccagccttcctgaatcctcccct
tctcactcacccaaactgaccccatccagtggtcacctgttagctctgccccctgccctg
ggctccacctctggctccgcgagtcaggcatcactggcagagcaggtgcgtgcacgtctg
ctcggttcagtggaggacatgcgttctgtagggctgaggaaacctctttcgcctgagacg
cgccggcggaggcgggcctggaggagacacacagtggtggtctcgtctacggactcctcc
cgcaaaagcactcaagtctcctctgccgttaacaacaacaacaaacccccggccccgccc
cccaaacctttcgttttaatccgacgtcctggggaaaagcccatcctcgttccccagcgc
tccgcagccgacgccccttcatcacaccgggccccgcctacctcccagttccacgaatgc
ttgtga
DBGET
integrated database retrieval system
