Pangasianodon hypophthalmus (striped catfish): 113528582
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Entry
113528582 CDS
T05759
Symbol
rrn3
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113528582 (rrn3)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
113528582 (rrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
113528582
NCBI-ProteinID:
XP_026773019
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MEVERDFINTPPPKTVRFGDSVANTLAKVKQGDTSDYEMIKHQLSDPDIKDAQIISWLQE
FRSCVTQLGKEHEQLIYMVLRLPWLGRSAAVVDEYLAFLSNLISAQTVYLRSCLKTLVSN
FTPRRVKIQEGNVDISDSDDDDENLPRIFDHCHQALQMIARYVPSTSRFLMPILSDNFPF
VQKSSRTLECYVHNLLRITVYIPALRRDVLELIISKMLTLDVSAPRSEIEEVESLREQNH
AAGAQDDFLFNMDEDESSPHDGGLLMFHSVAERLDTLMLVLLSFIKDMSHVNGVLDVDRV
KALYRDLVCVFDKLVLPTHASCHVQFCMFYLCSFRLGLAEAFLDHLWKVLQSPSQPAVLR
QAAAAYMGSFLARAKFIPIATVRACLDLLVPWLHLYIDSQDSGSKAFCDVSLHGPFYASC
QAVFYTLIFRHRAILEGNMKKGLAYLQSLNLERIVMSQLNPLKVCLPAVTNMFAAIMRKY
QLVFCYTIIERNNRCMLPVVRSSVGGDSLSTNTNPLDTFFPFDPYLLKRSGHYFESIYQV
WEEPSDCMAAPKKEVTKSSTEEEDDFLHGETPQADMVMGSYESHLRSPSSVGSPPIAFLQ
RPF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggagagagatttcattaacactcctccacccaaaactgtgcggtttggggac
agtgttgccaacactctggccaaagtcaagcagggagacacaagtgactatgagatgata
aagcatcaactttcagaccctgatattaaggacgctcagatcatcagctggctgcaggag
ttcaggtcgtgcgtcacgcaactcggcaaagaacacgaacagctgatctacatggttctg
aggctgccgtggctcgggcggagtgctgccgtggtggacgaatacctggcgttcctcagc
aacctcatctcagctcagaccgtgtacctgaggtcgtgtctcaaaacgctcgtctctaat
ttcacccccagaagagtgaaaatccaggaagggaacgtggacatatcggattcggacgat
gacgatgagaacctgcccaggatattcgatcactgtcatcaagccttacagatgattgca
agatacgttccatctaccagccggtttctgatgccaatcctcagtgataacttccctttt
gtacagaaatcatccagaacgctggaatgttacgttcacaacctgcttcggatcacggtc
tatattccggctctgagacgggacgtgttggagctcatcatcagcaagatgctcactctg
gatgtgagcgccccccgcagtgagatcgaggaggtggagagtttgagagagcagaatcac
gccgcaggggctcaggacgacttcctgttcaacatggatgaggatgagagctctccgcat
gatggcggtctgctgatgtttcactctgtagctgagagactggacacgctgatgttagtg
ctgctgagcttcattaaagacatgagccacgttaatggtgtgttggatgtcgatagagtc
aaagctctgtacagagatctggtgtgtgtgtttgataagctggtgctgcccacacacgct
tcctgtcacgtgcagttctgcatgttttacctgtgcagcttccgcctgggtttagctgaa
gccttcctggatcacctgtggaaggtgctacagagcccgtctcagcccgctgtcctccgc
caggccgccgccgcctacatgggcagcttcctcgccagagccaagttcattcccatagcg
acggtgagggcatgtctggacctgctggttccttggcttcatctttacatagacagccaa
gattcgggttctaaagcgttctgtgacgtttctctgcacgggccgttctacgcttcgtgc
caggccgtgttttacacactcatcttcagacacagagccatcctggagggcaacatgaag
aaaggcttggcctatttacagagtttgaatctggagcggatcgtcatgagtcagctgaac
ccgctgaaagtgtgtttgccagccgtcaccaacatgttcgccgccatcatgaggaaatat
cagctggtgttctgctacacgatcatcgagcgaaacaaccgctgcatgttgcctgtagtg
aggagctcagtgggcggagactctctctccaccaataccaatcctctggacacatttttc
ccctttgatccgtacctactaaagagatctggacattattttgaatcgatctatcaggtg
tgggaagagccgagcgactgcatggcagctccgaagaaggaagtcacaaaaagttctaca
gaagaagaggacgacttcctccatggtgaaactcctcaggctgacatggtgatggggtcg
tacgagtcgcatctccgcagccccagcagtgtgggctctcctcccatcgccttcctccaa
cgacccttctga
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