Pangasianodon hypophthalmus (striped catfish): 113528593
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Entry
113528593 CDS
T05759
Symbol
gfap
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113528593 (gfap)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113528593 (gfap)
Membrane trafficking [BR:
phyp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
113528593 (gfap)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
113528593 (gfap)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
Myosin_tail_1
DUF1664
DUF7491
TolA_bind_tri
GAS
BLOC1_2
APG6_N
MYO6_lever
CENP-F_leu_zip
Fib_alpha
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
113528593
NCBI-ProteinID:
XP_026773038
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
METQRVLSSYRKRFGTQSSPSAPLITRSLGRLSLHSTPRHTALSSPSMSRLSLGTERLDF
SADSLLKAQYRETRTNEKVEMMGLNDRFASYIEKVRFLEQQNKVLVAELNQLRGKEPSRL
GDIYQEELRELRREVDGLNNAKARLEIERDNLAADVGTLKQRLQDETAQRQDAENSLNAF
RQDVDEAALNRVQLERKIEALQDEINFLKKVQEEEMRELQEQLNAQQVHVDLDVSKPDLT
AALREIRVQYEAMATSNMQETEEWYRSKFADLTDAANRNAEALRQAKQEANDYRRQIQAL
TCDLESLRGTNESLERQLREMEERFSTDTAAYQDTVARLEEEIQALKEEMARHLQEYQDL
LNVKLALDIEIATYRKLLEGEESRITVPVQSFANMQFRETSIDTKTPPESLTKRSIIVRT
VETRDGEIIKESTTERKELQ
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagacccaacgtgtcctctcatcctaccgaaagcgtttcgggactcagagcagccct
tcagccccgctcatcaccaggagccttgggcgtctgtccctccacagcaccccacgccat
acagccctgtccagccccagcatgtcccgtctgtccctgggaaccgagaggcttgacttc
tcagccgactcgctgctgaaggctcagtaccgtgagacgcgcaccaatgagaaggtggag
atgatgggcctcaatgaccgcttcgctagctacatcgagaaagtacgtttcctggaacag
cagaacaaggtgctggtggctgagctgaatcagctgcgtggaaaagagccaagccgcctt
ggggacatctaccaagaggaactgagagagctgcgcagggaggtggatggcctgaacaat
gccaaggcacggctggagattgagagggacaacctggcagctgatgtgggcacactgaag
cagagacttcaggacgagactgcgcagagacaagatgcagaaaacagcctgaatgcattt
agacaggatgtggacgaggcagctctgaacagggtgcagctggagcggaagattgaagcg
ctgcaggacgagatcaatttcctgaagaaagtccaagaggaggagatgcgggagctgcag
gagcagttgaatgctcagcaggtgcacgtggacctggacgtgtctaagccggatctgact
gcagcactgagggagatccgagtgcagtacgaggccatggcaacctccaacatgcaggag
actgaggagtggtaccgctccaagtttgcggatctgactgacgcagccaatcggaacgca
gaggctctgcgccaggcgaagcaggaagccaacgattaccgcagacagattcaggccctg
acgtgtgacctggagtctctgcgtggaaccaacgagtctctggagcggcagctgcgtgag
atggaggagcgtttctccacggacacagcggcgtatcaggacacggtggcgcgtctggag
gaagagatccaggcgctgaaggaggagatggctcgacacctgcaggagtaccaggacctc
ctcaacgtcaaactggcgctggacatcgagatcgccacctacaggaagctgctggagggc
gaggagagccggatcactgttcctgtgcagagttttgccaacatgcagttcagagaaacc
agcattgacactaaaacaccacccgagagtctcactaagagaagcatcatcgtacgaact
gtggagacacgcgatggagagatcataaaggagtcgaccacggagaggaaggagctgcag
taa
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integrated database retrieval system
