KEGG   Pangasianodon hypophthalmus (striped catfish): 113528744
Entry
113528744         CDS       T05759                                 
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113528744 (taf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phyp03021]
    113528744 (taf6)
   03036 Chromosome and associated proteins [BR:phyp03036]
    113528744 (taf6)
Transcription machinery [BR:phyp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     113528744 (taf6)
   Coactivators
    SAGA/TFTC/STAGA complex
     113528744 (taf6)
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     113528744 (taf6)
    STAGA complex
     113528744 (taf6)
    TFTC complex
     113528744 (taf6)
    SAGA complex
     113528744 (taf6)
    SLIK complex
     113528744 (taf6)
SSDB
Motif
Pfam: TAF6_C TAF Histone TFIID-31kDa ILVD_EDD_N CENP-S Bromo_TP TFIID-18kDa CBFD_NFYB_HMF HEAT_2
Other DBs
NCBI-GeneID: 113528744
NCBI-ProteinID: XP_026773234
LinkDB
Position
Unknown
AA seq 412 aa
MAEERRQKACSVLFSTESMKVMAECVGVSQLQEESCVALSEEISYRIKEITQDAMKFMHH
GKRRKLTTSDIDHALKLKNVEPLYGFQTQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPAIPENPPPVSKEQQKSESSEPLKAAKPGQEEDGSIQS
KAQGASSAEVKGKEKLRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMMKALMDNPTLYLEKYLHELLPAVMT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKAWLDDKTQW
TTRYGCIAGLSELGPDVSLSLLTECCRPPTVFILTVCVCSRDVNVTGSSAWH
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggcagaggagcgcaggcagaaggcttgttcggtgctgttctccaccgagtcaatgaag
gtgatggcggagtgtgttggcgtgtcccagctgcaggaggagagctgtgtagccctcagc
gaggagatcagctacaggataaaagagatcactcaggatgcgatgaagttcatgcaccat
ggcaaacgacgcaaactgacaacaagtgacatcgaccacgccctcaaactgaagaatgtg
gagcctctgtacgggtttcagactcaggagtttattccgtttcgctttgcaagtggtgga
ggacgtgaacttcacttttatgaggagaaggaagtggacttgagtgacatcatcaacacg
ccccttccccgcgtgcctcttgacgtctccctcaaagctcactggttgagtattgatggt
gttcagcctgcaatcccagagaacccacctccagtatctaaggagcagcagaagtcagag
tcgtctgagcctctaaaggcggctaaacccggacaggaggaggacggctccatccagagt
aaggctcagggcgcctcctctgcagaggtcaaaggaaaggagaagctgcgtctgaagccc
cgcagtacacacgagctctctgtggaacagcagctctactataaagagatcactgaggcc
tgtgtggggtcctgcgaggccaagagagctgaggcgctgcagagtatagccacagatccc
ggtctgtaccagatgctgccccgtttcagcaccttcatctctgagggggtgcgtgtgaac
gtggttcagaataatctggcgttgttgatttacctgatgaggatgatgaaggctctgatg
gataaccccactctctacctggagaaatatctgcacgagctcctccctgcagtgatgacg
tgtatagtgagtaaacagctgtgtctgaggccagatgtggataatcactgggctctcagg
gactttgcagctcgtctcatggctcagagctgcaaaaccttcagcaccaccaccaacaac
atccagtctcgcatcaccaagaccttcaccaaggcatggttggatgataagacccagtgg
acaactcgttatggttgtattgctggtctttcggagctcggccctgatgtgagtctgtca
ttgctaacagagtgttgcagacctcctactgtgttcatactgactgtgtgtgtgtgttca
cgtgatgtaaacgtcacaggaagttctgcgtggcactga

DBGET integrated database retrieval system