Pangasianodon hypophthalmus (striped catfish): 113528750
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Entry
113528750 CDS
T05759
Name
(RefSeq) transcription factor Sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113528750
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113528750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113528750
NCBI-ProteinID:
XP_026773242
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MYNMMETELKSPLPPQSNAGSGPGGKSGGGSEQDRVKRPMNAFMVWSRGQRRKMAQENPK
MHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKY
SLPGGLLAPGAGAVNSAVSVGHQRMDGYAHVANGWTNGAYSLVQEQLAYPQHHGMSSPPP
LQQMHRYDMTAGLQYPMMSTAQTYMSAASTYSGVSYAQQSPGAVGLGSVPSVCKTEPSSP
PPAIASHSQRACLGDLRDMISMYLPPGGDSADHNTLQSSRLHSVHPHYQSAGTGVNGTLP
LTHI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagttaaaaagtcccctgccgccgcagtccaacgcgggc
tcggggccgggcgggaagagcggcggcgggagcgagcaggaccgcgtgaagcggccgatg
aacgcgttcatggtgtggtctcgcggccagcgcaggaagatggctcaggagaaccccaag
atgcacaactccgagatcagcaagcgcctgggcgcagactggaagctgctcactgacgct
gaaaagcggccgtttatcgacgaggcgaagcgcctgcgtgccatgcacatgaaggagcac
ccggattacaaataccggccgcggcgcaagaccaagaccctgctgaagaaagacaagtac
tcactacccggcggcctcttggctcccggtgcgggcgcagtaaacagcgccgtgtcggtg
ggccaccagcgcatggacggctacgcacacgtggccaacggctggacgaacggcgcgtac
tcgctggttcaggaacagctggcctacccgcagcaccacggcatgagcagcccaccacct
ctgcaacagatgcaccgctacgacatgacggcgggtctgcagtaccccatgatgtccacg
gcgcagacctacatgagcgcggcgtccacgtacagcggcgtgtcgtacgcgcagcagagc
ccgggcgccgtgggcctcggctccgtgccctccgtgtgtaagacagagcccagctcgccc
ccgcctgccatcgcctcacactcacagcgcgcctgcctcggagacctgagggacatgatc
agcatgtacctgccgcccggaggagacagcgccgatcacaacacactgcagagcagccgc
ttacacagcgtacacccgcactaccagagcgcggggaccggggtgaacggaacactgccc
ctgacccacatctaa
DBGET
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