Pangasianodon hypophthalmus (striped catfish): 113528774
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Entry
113528774 CDS
T05759
Name
(RefSeq) F-box/LRR-repeat protein 14-like
KO
K10280
F-box and leucine-rich repeat protein 14
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113528774
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113528774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_Zer-1
LRR_RPS2
LRR_EndoS
LRR_8
LRR_At5g56370
LRR_14
LRR_At1g61320_AtMIF1
LRR_R13L1-DRL21
F-box
LRR_NXF1-5
SAM_Ste50p
Antiterm
Motif
Other DBs
NCBI-GeneID:
113528774
NCBI-ProteinID:
XP_026773281
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
METHISSLFPEILAMIFSYLDVKGKGRVAQVCVAWRDASYHKSVWRGVEAKLHLRRANPS
LFPSLQSRGIKKVQILSLRRSLSYVIQGMPNIESLNLSGCYNLTDNGLGHAFVQDIPCLK
ILNLSLCKQITDSSLGRIAQYLKNLEFLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCR
HVSDVGIGHLAGMTRSAAEGCLGLEHLTLQDCQKLTDLSLKHISKGLSKLKVLNLSFCGG
ISDAGMIHLSHMTQLWTLNLRSCDNISDTGIMHLSMGSLRLFGLDVSFCDKVGDQSLAYI
AQGLYQLKSLSLCSCHISDDGINRMVRQMHKLKTLNIGQCVRITDKGLELIADHLTQLTG
IDLYGCTKITKRGLERITQLPCLKVLNLGLWEMTEGERVR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggagacccacatctcaagtcttttcccggagattttagcgatgatcttcagctacctg
gacgtgaaaggtaaaggcagggttgctcaggtgtgtgtggcctggagagacgcatcctac
cacaaatcagtgtggagaggagtcgaagccaaactccacctgaggagagcgaacccgtcc
ttattccccagccttcagagccgagggattaaaaaagtgcagatcctgagtctcagacgc
agcctcagctatgtcattcagggcatgccgaacatcgagagccttaacctgagcggatgc
tacaatctgacagacaacggactcggacatgcatttgtgcaggacattccttgcctgaag
atcctcaatctcagcctctgtaagcagattacagactccagccttggccgaattgcacag
tatctaaagaacctggagtttctggagctcggggggtgcagtaacatcaccaacaccggc
ttgctccttattgcatggggcttgcacaggctcaagagcctgaatctacgcagctgcagg
cacgtctccgacgtgggcatcggtcacctggctggcatgacgcgcagcgccgctgaaggt
tgcctcggtttggagcatctcactctgcaggactgtcagaaactgaccgacttgtcactc
aagcacatctcaaagggcctgagcaaactcaaagtcctgaacctgagcttctgtggcggc
atttcagacgccggaatgattcacctgtcgcacatgacccagctgtggactctgaacctg
cgctcgtgtgacaacatcagcgacacagggatcatgcacctgtccatgggctcgctccgg
ctgttcgggttggacgtgtcgttctgcgacaaagtgggagaccagagcttggcttacatc
gcccaaggactttatcagctcaagtcgctctcgctgtgctcgtgtcacatcagcgacgat
ggaatcaacaggatggtgcggcagatgcacaaactgaagacgctgaacattggacagtgc
gtgcgcatcacagacaagggcctggagctcatcgctgaccacctgactcagctgaccggc
atcgatctgtacggctgcaccaaaatcaccaaacggggactggagcggataacgcagctc
ccgtgccttaaagtgttgaacttggggctttgggagatgactgagggtgaaagggttagg
tga
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