Pangasianodon hypophthalmus (striped catfish): 113528842
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Entry
113528842 CDS
T05759
Name
(RefSeq) zinc finger protein ubi-d4-like
KO
K13196
zinc finger protein ubi-d4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113528842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113528842
03036 Chromosome and associated proteins [BR:
phyp03036
]
113528842
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113528842
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113528842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
PHD_2
Lar_restr_allev
zf-C2H2
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
113528842
NCBI-ProteinID:
XP_026773398
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAAAVENVVKVMGEQYYKDAMEQCHSYNARLCAERSILMPFLDSQTGVAQSNCYIWMEKR
HRSAGVAPGQLYTYPARRWRKKRRAHPPEDPALVFPPLKTADLELGLKKDGLGPLDGSSL
EALLKGEPMDKRAAPELRGPEEDQSLADITGTAGASSHSGSTRVRKRILEPEDYLDDLDD
EDFEEETPKRRKGKSKGRGVGNGKKKTEAAAAALEDRDKPYACDICGKRYKNRPGLSYHY
THSHLAEEEGEEKEEAEIHTPAPQEETKTPKKGPNGLAPPNDYCDFCLGDSNMNQKTGQS
EELVSCSDCGRSGHPSCLQFTAVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDDCD
RGYHMYCLTPPMSDPPEGSWSCRLCLDLLKDKASIYQSQNPTVE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgttgagaatgttgttaaagtgatgggagagcagtattacaaagatgcc
atggagcagtgtcacagctacaatgcccggctgtgtgcagagagaagcatcctcatgcct
tttctcgactcccagactggagtagctcagagcaactgctacatctggatggagaaaagg
cacaggagtgcaggcgtagcaccagggcagttatacacgtaccctgcccgccgctggagg
aagaagagaagggcacatccaccagaggaccccgctttggttttccccccactcaaaaca
gccgaccttgaattgggattgaaaaaagatgggttagggcctttggatggaagcagcctg
gaggctttgctgaaaggagaacccatggataagagagccgctccagagctcaggggccca
gaggaagaccagagtctggcagacatcacaggcactgccggggctagtagccacagtgga
tccacacgtgtgagaaagagaatcctagaaccagaagactatctggatgacctggatgat
gaagattttgaggaggagaccccaaaaagacggaaaggaaaatctaagggtcgtggagtc
ggaaatgggaagaaaaaaacagaagcagctgcagcagctttggaagatcgtgataaacca
tatgcctgtgatatctgtggaaaacgctataagaatagaccaggcttgagttaccactac
acccactctcacctggctgaagaagagggagaggaaaaagaggaggctgagatccacact
cctgcaccacaggaggaaaccaagactcctaagaaaggtcccaatggcttggcaccgcca
aatgattactgtgatttctgcctgggtgactccaacatgaaccagaagacgggccagtct
gaggagctggtgtcctgctctgactgtggacgctcgggccatccttcttgcctgcagttc
acagcagtgatgatggcagcggtaaaaacatatcgctggcaatgcattgaatgcaagtgc
tgcaatgtttgtggcacgtctgagaatgatgaccagcttctgttctgtgatgactgcgac
agaggataccatatgtactgcctcactcctcctatgtccgacccaccagaaggaagttgg
agttgtcgtttgtgtctggatcttctgaaggacaaggcttccatctaccaaagccagaat
cctacagtagagtaa
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integrated database retrieval system
