Pangasianodon hypophthalmus (striped catfish): 113528889
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Entry
113528889 CDS
T05759
Name
(RefSeq) FERM and PDZ domain-containing protein 1-like isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113528889
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Other domain-containing proteins
FERM domain-containing proteins
113528889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
PDZ_2
FERM_f0
Adenosine_kin
TIG
Sec10_N
Motif
Other DBs
NCBI-GeneID:
113528889
NCBI-ProteinID:
XP_026773505
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MEERERSRSRSPRRVRRVEQVVGRWLRRSRDSLSRERILGDRKSGRSDDGGQQHFPVKET
VEVIRDAVLDSHGFTLSTQLPLLVRDIIPGGPADGRLLPGDQVLKVNNKAIDDLSPEYVD
NMIRQCQDSVTVTVLRNMLNPKSSFMSAEKRARLRRNPVKVRFAEEVLVNGHTQGNSLLF
LPNVLKVYLENGQTKAFKFDKTTTVKDIVLTLKDKLSIRSIEYFSLVLEQQYSITKLLLL
HEDELIQKVVQKKDSHDYRCLFRVCFIPRDPVDLLHDDPVAFEYLFHQSVGDVLQERFAV
EMKCNTALRLAALHMHERLASCGQTTRASIKNITKEFGLESFISPTLLRNMREKDLRKAL
TGHMKKIQSLLEPRQKVISVPQARLAYLTQMAELISYSGRSYNATMLLQDRESLVSLLVG
ARFGVSQILNHKLNMISTIIDFHYISRVEVLSESDRVSMLKIYLHDIQPLALLMDSVAAK
DLACLLAGYCKLLVDPNMNVFRWGPRPKIRRIPLEEGFGFRCGSDSEESSDEDYSMDNLL
DTPVSEDTVSTQTNEDREDEKDEEKEEAKANTVRVIVTQTEEEEKVVEGALEGTSTSGSI
EDEDYAAREDALLETGWYTDPRVNSSFSSLSSNSLNTLEEISKVSTTWPACLNTFQEEMP
KSDQATGASRLDVHHPYLLEIPEHLNQKEKSNPSSDWLYDKHSGLRYSDLSQMSDSLPSP
PEASDDALSDLEEINKDENKNYRPADIDAVLASGSSNSIKSTVAGFNVQALLARVRSHPA
CKKDLRNSNLHQKEEAKSKAPLSRPKVQPPPPPQRTISRVSEIAKDIRNSGSESEDEFFD
AQDRLTPPIFEQPAEKKINVNGVEHALKQTDARVSGEEPAASKMQSQLDKPHDDNSLPIS
RNNPKKDASLLKDLTPAKNILDNKELEGHQPSVILLPQPAMLEPNPISNNHISDKKGQQC
NGDIPGHNAHISSELLEMEPDTMEFKPVTTAGPPLSSPLITALWQSKSQLPTTVDPATLL
NDAQNITNPTDSKKDEIVKEEKTEHHQSLPSLQPKKEEVFAKPPEPDKLISKVSQSSTDL
ALKTEDQKPSNGISLRTWSQRNGATPGPPLSKGVSLSHENLKCQLRNENTAVTVTSSSTL
TATPPPSVTMRGSISMDPKDPFGIGRSFSTRSSSGRLPASALRGKIQDMPWYLTRSQEIL
GTVALSSDKLADTKASKDAADYKDSKKESPKSTSVPALNDWKEKDAELVVVKLKDGPQEV
PSHVQDTSGKTSLSGHPDLRKNGLQDSTELFSRLGTCRSEQPKSQKNTGTKDNLERPSPP
SSTGTPHRDACGCHTVYANCFSGDSEDLCGFDDDLTVYEFSRQKRINKPPQTSTAPSSAP
SSNILSLLRDTPRPLSTSSELSPLFTPPRPRPLGYNPLDNPLRDLQERRYVTGLKGTGIK
GGYTSLHKDIDELLLVLKNGETAINPPGQKGPCEKASGMNGNSFSETERCLVQAEARRLA
SGCQRATRVGWAPDDALLSLGNSFGALVHLAAACLQVSCSDCGSCHGDIDGTEALRKLQE
IVCLYKEFVMAVETAREGEGVRLLAKQCTVLISTVFSLTQLFRTHTPDTDNRHLPLNF
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagagagaggagtaggagtcgctccccgcgtagggtgcgtcgggtagagcag
gttgtggggagatggctgcgccgatcacgagactccctcagcagggagcgtattctaggg
gacaggaagtcaggccgttcagacgatggaggccagcagcatttcccagtgaaggagaca
gtggaggtgatcagagatgctgtgctggactcacatggcttcacactctccacacagctc
cccctgctggtcagggacattattccaggaggaccagcagatggacgcctcttaccaggt
gatcaagtattgaaagtgaataacaaagccattgacgacttgtctcctgaatatgtagac
aacatgattaggcagtgccaggattctgtaaccgtgacagtgctcagaaacatgttgaac
cccaagtcctcatttatgtcagcagaaaagagagctcgcctgagacgaaatccggttaaa
gtgcgctttgctgaggaagtattagtcaacggacacactcagggaaactcccttctcttc
ctgcccaatgtgcttaaggtctacctggagaatgggcaaaccaaagccttcaaatttgat
aagaccaccacagtgaaggacattgtgctgactttaaaggacaagctgtcaattcgatct
attgagtatttctccctggtgctggagcagcaatacagtatcaccaaactcctgttactg
catgaagatgagctcatacagaaggtggtacagaagaaggactcccatgattacagatgt
ctgttccgagtgtgttttatcccccgagatccagtggacctcctgcatgatgacccagtt
gcctttgagtacctctttcaccagagcgttggggatgtgctgcaggagcggtttgcagta
gagatgaaatgtaacactgctctgaggctagcagcactgcatatgcatgaaaggttggcc
agctgtggacaaactaccagagcatctatcaagaatattactaaggagtttggattggag
agttttatttcacccacattactgaggaacatgagagaaaaagatctgcggaaagctctt
acaggtcatatgaagaaaatccagtcactgcttgaaccgcgtcaaaaagtaatctcagtg
cctcaggccaggttagcatatctaactcagatggcagaactgatatcatatagtgggaga
agctacaatgccaccatgctgctgcaggaccgggagtcgttggtgagtttgttggtggga
gcacgatttggtgtcagtcagatactaaaccacaagctgaacatgatctcgactattata
gacttccattatatcagccgtgtagaagtactctctgagtctgacagggtcagcatgcta
aagatctacctacatgatatccagcccctggccttgctaatggattctgtagctgctaag
gacttggcatgtctgctggcaggctattgcaaattgttggtggatcccaatatgaacgtg
ttccgctggggccctcgccccaaaatacgtcgtatacctttagaagaaggctttggattc
cgctgtggcagtgactcagaggagagctcagatgaggactattccatggacaacctgcta
gacacaccagtctctgaggacactgtctcaactcaaacaaacgaagacagggaagatgag
aaggatgaagagaaagaagaggccaaagcaaacacagtaagggtgattgtgacccagaca
gaagaagaggagaaggtagtagaaggtgctctagaaggaacaagtacaagtggctctatt
gaggatgaagactatgcagcaagagaagatgcacttctggaaacaggatggtacacagac
ccaagagtaaacagcagcttttctagtctgtccagcaactcgcttaacactcttgaggag
attagcaaagtatccactacatggcctgcttgtttgaacacttttcaggaggagatgccc
aaatcagaccaggctactggggcctctaggctggatgtccaccatccttaccttctagag
atccctgaacacctgaaccagaaagagaaatcaaacccctcctctgactggctctatgat
aagcacagtggcttgaggtacagtgacctctcccaaatgtctgactcccttccaagccca
cctgaagcaagtgatgatgctctgagtgatttggaagagattaataaagatgaaaacaaa
aattatagacctgcggacattgatgctgtgttggcttcgggtagtagtaatagcataaaa
tctacagtagctggcttcaatgtccaagcacttttagcaagggtccgtagccatccagca
tgtaagaaagatttgagaaattctaacctccaccagaaagaggaagcaaagtctaaagca
cctttgtccagaccaaaagttcaacctccacctccaccacaaagaacaatatccagagtt
tctgaaatagcaaaggacatcagaaacagtgggtcagaatcagaagatgagttctttgat
gcacaggatcgtctcactccaccaatctttgaacaacctgcagagaagaaaataaatgtg
aatggagtggaacatgctctgaaacagactgatgcaagggtcagtggggaggaaccagca
gcatccaagatgcagagtcaattagacaagccacacgatgacaattctttacctattagt
agaaacaacccaaagaaggacgcttcccttcttaaagatctcactcctgcaaaaaatatt
cttgataataaagagctggagggtcaccagccatcagtgattctgcttcctcaaccagcc
atgcttgaacctaatcctatctcaaataatcacatctcagacaagaagggccagcaatgt
aatggagatattcctggccataatgctcacatatcctctgagcttctggagatggagcca
gacactatggagtttaagcctgttactacagctggaccaccactgtcgtcccccttaatc
acagcattgtggcaatctaaatcccagctaccaaccacagtggatcctgcaacacttctg
aatgatgctcaaaatatcacaaatcctacagactctaaaaaagatgaaatagttaaagaa
gagaaaacagaacaccaccaatcactgccttctctgcagcccaagaaagaagaagttttt
gcaaaacccccagaacctgataaactcatatccaaagtttcccaatcatcaactgatcta
gctctgaaaactgaagatcagaaaccatcaaatgggatttctttgcgtacctggtcccag
cggaacggggccacccctggccctcctctgagtaaaggggtctctctaagccatgagaat
cttaaatgccaactaaggaatgagaatactgcagtcacagtgaccagctcttcaactctg
acagccactccacccccatctgtgactatgagaggctctataagcatggatcccaaagat
ccctttgggattggaaggagctttagcaccagaagttcttcggggcgtctgcctgcttca
gcactacgtggaaagatccaggacatgccctggtatctcacccgatcccaggaaattttg
gggacagtagcactcagcagtgataaattagcagacactaaagcatctaaagatgcagct
gattacaaggactctaaaaaagaatctccaaaatccacttcagtacctgctttgaatgat
tggaaagagaaagatgctgagttggttgttgtgaagctcaaagatgggccacaagaagta
ccctcacatgtacaagacacaagtgggaaaacttcattgtctggtcatccagacctgagg
aagaatgggttacaagactccactgaacttttctcacgcttgggaacatgcaggtctgaa
cagcctaagtctcaaaaaaacactggtacaaaggataatctggaaaggccatctcctcca
tctagcactggcacaccccaccgtgatgcatgtgggtgccatactgtttatgccaattgc
tttagtggggattctgaggatttgtgtggttttgatgatgatctcacagtgtatgagttc
tctcgtcagaaacgaatcaacaaaccaccccagacctccactgcaccttcctctgcccct
tcttccaacatcctatctctgctaagagatacacctcgccctctttcaacctcttctgag
cttagtcctctctttaccccaccccggcctagacctctgggttacaacccattggacaat
ccactacgggatcttcaagaaagacgatatgtaacaggcctaaaaggtactgggattaaa
gggggctacacgtccctgcacaaagatattgatgaacttctgctggtgcttaagaatggt
gagactgcaataaatcctccaggccagaaggggccatgtgaaaaggctagtggtatgaac
ggcaattccttttctgaaacagagcgatgtttagtgcaggctgaggcacggaggctggct
tcaggatgtcagcgtgccacgcgcgttggttgggcaccggacgatgctcttctctcattg
ggcaatagctttggagctttggtacacctagcagcagcttgccttcaagtgtcctgttca
gactgtggaagttgccatggtgatattgatggtactgaggctctaaggaagcttcaagaa
attgtgtgtctgtacaaggagtttgtgatggctgtagaaacagcccgagagggggagggc
gtcaggttgttagctaaacaatgcacggttctaatctctacagtcttctctctaacacag
ctcttcaggacacacactccagacacagacaatagacatttacccctaaatttctga
DBGET
integrated database retrieval system
