Pangasianodon hypophthalmus (striped catfish): 113528950
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Entry
113528950 CDS
T05759
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113528950
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
113528950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
113528950
NCBI-ProteinID:
XP_026773618
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MAGLSGNGKLRQWLIEQVDGGKYPGLVWEDREKSTFRIPWKHAGKQDYNREEDAALFKAW
ALFKGKYREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDTSEPYKVYRVIPEGTKR
ASCERTSTMTSPHSFPLYPTYTPLQSQVSNFLSPGEKGWRDLPEQAPFPDFYYPYSPNSY
TTSWDSVGYQISNSLYSCGGFDPSPSTFNLEQNMRSAAFSDPRLQVSVFSGDSLIKEMTV
FSTEGCRLAPYEENQNYGGPELVQLPQGEGTELERGVLVWMAPDGLCARRLCNARVYWEP
APTTNTDKPNKLERNQTSKLLDIQQFIAELQGYYLQARPPPCFQVLLYFEQCHDIHAHRR
PITVQVEPLFARQLFILSQQSSTHHMRAPDNAPLMWEQMPPSQQNYYTGSSQQHDTMQD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggctggactctcggggaacggaaagcttcggcagtggctgattgagcaggtggatggg
gggaaatacccggggctggtgtgggaggaccgcgagaagagcacattccgtattccgtgg
aaacacgccggcaagcaggattataaccgcgaggaagacgcggcgctcttcaaggcctgg
gcgctctttaagggcaaataccgcgaaggcatcgataaaccggatccgccgacatggaaa
acgcgcctccgctgcgccctcaacaaaagcaacgacttcgaggagctggtggagaggagc
cagctggacacctccgagccttataaagtttacagggtcattccagagggcactaagaga
gcgtcctgtgagaggacttctacaatgacaagccctcacagctttccactgtacccgaca
tacacacctctgcagagtcaagtttctaacttcctgtctccaggtgagaaaggatggaga
gatttgccagagcaagctccatttccagatttctactatccctacagtccaaactcatac
accacatcctgggactcagtcggttaccagatcagcaactctttatacagctgcggtggt
tttgacccttcaccatctacctttaacttggagcagaacatgagatctgcagctttctct
gatcccagactgcaggtgtctgtattcagtggggattctctgatcaaggagatgactgtg
ttcagcacagagggctgcaggttggctccttatgaagagaaccagaattacggaggccct
gaactggtgcaacttcctcagggtgagggcacggagctggagcgtggcgtattggtctgg
atggctcctgatggcctgtgcgcccgtcggctctgcaacgccagggtctattgggagccg
gcacccaccaccaacactgataaacctaataaactggagaggaaccagaccagcaaactt
ctggacatccagcagttcatcgcagagttacaaggctactatctacaggcacgtcctcct
ccttgtttccaggtgctgttgtattttgagcagtgccatgacatccacgctcacaggagg
cccataacagtgcaggtggagccattatttgctcgccagttgttcattttgagtcagcag
agcagcacacaccacatgagggctcctgataacgcaccactgatgtgggagcagatgcct
ccttctcagcagaactactacacagggagctctcaacagcatgacacaatgcaggactaa
DBGET
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