Pangasianodon hypophthalmus (striped catfish): 113529140
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Entry
113529140 CDS
T05759
Name
(RefSeq) caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
113529140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113529140
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
113529140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
113529140
NCBI-ProteinID:
XP_026773922
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MDEDFERRRELRRQKREEMQREAEKMSYVKLDEDDEEAARERRRRARQERLRNMQNEEIS
NTAKELNSTDSTVTDTDSSALITAPATSEDDQALLERLAKREERRQRRMKEALERQKEFD
PTITDGEATVTTTTSEDRPSRRSRLRDEEGETNKNEVPSSETNSWTEKEEKNKDENVEES
KVEVQEAVPVKEEPVPEPASEEPKDKQEDTVEKKEEEAERPRRSYLREQGSTEEKDKVST
NEEKGEDQSVSTNIVAEEKTDTGLDSTDLEKKEIKDESLLSKEESQVEPAREEEKVEAAV
SEKPVISKMEEEEKPVEDEKPLEAPSETSAAPVSTVQDEPSLESKEVEEPPKETLEPSVE
KKEVEETQTETPKPSVEKKEIEEPQKETPEPLLVKTEVEKPQKDTFVPPPQKKEVEKIKE
DALKSPLEKKVVEKVRQEEEKPKILQKKTEEKPEKSKREIEVKVELPKKQAEEKPPVKVK
VEEKAVPPKKIEEKQPVLKKEIEEKPKWKKEAEEKFKAKTEDKVKPKEVVEEKPKPFFLR
DKNESARQQNEEDTSKFKKPEKPFGRVGLRSPEVEKPDPVAKQEAERKLVELKRRRNETE
SDEFEKMKQKQQTAEAELEELKKKREERRKILEEEEKQKKQEQEEKKAKEEQERQKMKEE
IERRRAEAAEKKRQKEESAEDSKLAFKCLSPKGASTKIGEKAGFLSKSALKTTVKAPHTP
IVCKIGNRLEQYTSAVQTKDVKSPKSPKDFPVAEGMRSIKSMWEKGNVQSPAAPGPASPA
TVNKETAGLNTGVTGRINSWKTKTPETKAPETKPPETKTPETKSVKPAEIKPIETKTPET
KSTKVGEMKKTESKTPEPKSLKPIETKATEKKPVDIKTPETKTTDKKTPEMKTPALGKPA
GGKPEPKPTDVSKTRGLWETKGSTPSKVFGLKTAFTNGTRK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggactttgaacgccgcagggagctccggagacaaaagcgagaagagatgcaa
agagaagcagaaaagatgagctacgtaaaacttgatgaggatgatgaagaggctgctcga
gagagaaggaggcgagccagacaggaaaggctgcgcaacatgcagaacgaggagattagc
aacactgccaaagaactcaacagcactgacagcactgtaacagacacagattcatcagca
ctgattaccgctccagccactagtgaggatgaccaggctcttctggagcggctggccaag
cgtgaggagcgcagacagaggaggatgaaggaagccctggagagacaaaaggagtttgac
cccaccatcactgatggagaagccactgtcaccaccaccaccagtgaggacaggccaagc
cgcaggagccgtctcagggatgaagaaggggagacaaacaaaaacgaggttccatcctca
gagaccaactcctggacagagaaggaagaaaagaacaaggacgagaatgtagaggagtca
aaggtggaggttcaggaggcagtcccagtaaaggaagaacctgtgccagaaccagcttca
gaggaaccaaaagacaaacaagaagacactgtggagaagaaagaggaggaagcagagagg
ccccggagatcctacctcagagaacagggatccactgaagaaaaagacaaagtgtcaaca
aacgaggaaaagggtgaagatcaatctgtcagtacaaacattgtggctgaggagaaaaca
gatacaggtttagacagtacagatttagaaaagaaagagattaaagatgaaagtttgttg
tcaaaggaagaaagtcaggttgaacctgcgagagaagaagaaaaagtagaggcagctgtc
agtgagaaacctgtaatatctaagatggaggaggaagaaaagcctgtggaggatgaaaaa
ccgttagaggcaccatcagaaacatctgctgctccagtgtcaacagttcaggatgaacct
tctctggagagcaaggaagtggaggaacctccaaaagaaacacttgagccttcagtggag
aagaaggaggtggaggaaacacagacggaaacacccaagccttcggtggagaagaaggaa
atagaggaaccacagaaagaaacacctgagcctttgttggtgaagacagaggtggagaaa
ccccagaaagacacatttgtgcctccaccacaaaagaaagaggtggagaaaataaaggaa
gatgcgcttaaatctccactggagaagaaggtggtggagaaagtgagacaagaagaagag
aaaccaaaaatactacagaaaaaaactgaagaaaagccagagaagtcaaagagggaaata
gaggtgaaggttgaacttccaaagaaacaagctgaggagaagcctcctgtgaaggttaag
gtagaggagaaagcagtgccaccaaagaagattgaagagaaacaaccagttttgaagaag
gagattgaagaaaaaccaaaatggaagaaggaggcagaagaaaaattcaaagcaaaaact
gaggacaaagttaaaccaaaggaggttgtggaagaaaagcctaaaccattctttttgcgt
gacaaaaacgaatcagcgaggcagcagaatgaagaggacacctctaaattcaagaaaccc
gagaaaccattcggccgcgtggggctgcgctctcctgaggtagagaagccggaccctgtg
gcgaagcaggaggccgagcggaagttggtggaattgaagcgccgaaggaatgagacggag
agtgatgagtttgagaagatgaagcagaaacagcagacggctgaggctgagctcgaggaa
ctgaagaaaaagagagaggagaggaggaagatcctggaggaagaagagaagcagaaaaaa
caggagcaggaagaaaagaaggccaaggaggagcaagagaggcagaagatgaaggaagag
atcgagcgcaggagggccgaggcagctgagaagaaacggcagaaagaggaatctgctgaa
gacagcaagttggcgttcaaatgtctgtctccaaaaggagcctcaacaaagattggcgag
aaagcaggatttctgagcaagtcggccctaaaaacaacagtaaaggcgccacacactcca
atagtgtgtaagataggtaacaggctggaacagtacacctcagctgttcagactaaggat
gtgaagtcacctaagtctcctaaggactttcctgtggcagagggaatgcgcagcatcaag
agcatgtgggagaaaggtaatgtgcagagccctgctgctccaggacctgccagtcctgcc
accgtcaacaaggaaacagctggattgaacacaggagtgacaggtcgcatcaacagctgg
aagaccaagactccagaaacaaaggctcctgaaaccaagccaccagaaacaaaaacccct
gaaacaaagagcgtgaaacctgctgagataaagccgattgagacgaagacaccagaaacg
aagagcacaaaagtgggagagatgaagaagactgagtcaaagacccccgaaccaaagagc
ttgaaacccattgagacgaaggcgactgagaaaaagcctgtggatataaagacccctgaa
acaaagaccactgacaaaaagaccccagagatgaagactccagcactaggaaaacctgca
ggaggcaaacctgaaccaaagccgactgatgtgtctaaaacacgtggcctgtgggaaacc
aagggctccaccccctccaaggtgtttggacttaagacagcatttacgaatggtacaagg
aagtaa
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