Pangasianodon hypophthalmus (striped catfish): 113529208
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Entry
113529208 CDS
T05759
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113529208 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113529208 (sh3rf1)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113529208 (sh3rf1)
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113529208 (sh3rf1)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113529208 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
zf-Nse
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
113529208
NCBI-ProteinID:
XP_026774050
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRCPECRTLVESGV
DELPSNILLVRLLDGIKQRPWRAGTGCTNGSAGGGVREHANPGAQPQRAQTKSTAVRGVP
QLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEVGGVHGFFPASFVQVIKPL
PQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDQNWAEGMLGDKIGIFPISYV
EFNSAARQLIELDKVPDDSAEGTSSSSSSSSSSSSSGPQANGSQKATGEKKNSKKRHSFT
SLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGELSGGLSSSAPSQVHICTTGL
IVTPPPSSPVTTATVFTFPPETSYASIPVDTLPPPPPPPPQSSSVGAASSLATGQRPSPT
ASDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFP
GNYMSPVSRTVASSSQPKVPLAMCSQAGRGITIVSASSSPIGAALGGVDPNKPLPICTGP
APSSPIPAAVVTAAHMPPGQHPKVLMHVTSQMTVNQARNAVRTAVCHNQDRPTAAVTPIQ
SQNAVAFLPHLAVCPQPSPGSASASNPTSSRIGVAMGCAAASLTPPNISAASLEVDGMRP
SAMVSLPVAPGNAKPLGATAANQAPACKLDKDCKREKKGLLKLLSNKKKLRPSPPSSPTL
EAEQAVAADMPQGAMAPEMPVPNSTAVASGNHSRTGPCPVEAETPAASSSTSSSSNTDAA
RRSGCQENSAPIAPPPRQPCSSLLSMQHDGRPIVCERYRVVVSYPPQSEAELELKEGDIV
FVHKKREDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatcggccctgctggatctgcttgagtgcccggtgtgcctagaacggctggac
gccaccgccaaggtactgccgtgccagcatacgttctgccgccgctgtctgctcggcatc
gtgggatcccgaggtgagctgcgatgccctgaatgtcgcacgcttgtggagagcggcgtg
gacgagttgcccagcaacatcctccttgtgcgtctgcttgatggcatcaagcaacgaccc
tggcgagcaggcacggggtgtaccaacggctcggctggaggcggggttcgagaacatgca
aacccaggagcgcagccccaaagagctcagaccaaaagcactgcggtcaggggagtaccc
cagctcccctgcgccaaggccttgtacaactacgatggcaaagaacccggcgacctcaag
ttcagcaagggcgacatcatcatcctgcgccggcaagtggacgagaactggtaccacggc
gaagtgggcggagtgcacggcttcttcccggccagcttcgtgcaagtgatcaagccactc
ccacagccgccgccacagtgcaaggccctgtacgacttcgagctgaaggacaaggaggct
gacaaggactgccttcctttctcaaaggacgacattctgacagtaattcgacgcgtggac
cagaactgggctgagggaatgctgggagataagatcggcatcttccccatatcctatgta
gagtttaactcggccgcacggcagctcatcgagctcgacaaggtgcctgacgactctgcc
gagggcacttcctcctcctcctcctcctcttcatcctcctcctcctcaggcccccaagcc
aacggctcacaaaaagcaacaggggagaaaaagaacagcaagaagcgccactcgttcacc
tcactgaccatgtcgcataagccgtgcctggccccgccgccacagcgccactccatggag
atcagcgggcccgtgctcatcagctcctcgaaccctacagcagccgcacgcattggggag
ctcagcggtggtttgtcctccagcgccccctcccaggttcacatttgcacaacaggcctc
atcgtcactccacctccgagcagtcctgtaacaacagcgacggtcttcacttttcctcca
gagaccagctatgcctccatcccagtggacactttgcctcctcctccacctcctccccca
caatcctcctctgtgggcgctgcgtcatcgttggccacagggcagaggccgtcccccact
gcaagtgaccagagtggacgtcagagaccgactgtatatgttgcgatgttcccgtacaca
ccccgtaaggaggatgagctggagctgagaaagggcgagatgttcctggtgctggagcgc
tgtcaggacggctggtttaaaggaacatccatgcacactggcaagatcggagtatttcct
ggcaactacatgagtcctgtcagcagaacggtggcaagcagcagtcagcccaaagtgcca
ttagcaatgtgctcgcaggctggacgcggcatcaccatagttagcgcctcgtcctctccg
atcggagctgccctgggtggcgttgaccccaacaagcccctccctatttgcacaggcccc
gccccttcaagccccattccggcggccgtagtgacagcagctcacatgcctcctggtcag
catcccaaagtgctcatgcatgtgacgtcacagatgacggtgaaccaggcacgcaacgct
gtgaggaccgctgtgtgccacaatcaggaccgccccactgcagccgtaacgcccatccaa
tcccagaacgccgtggctttcctgcctcacctggctgtgtgtccgcagccgtcacctggc
agcgcctccgcctcaaaccctacgtcaagtagaataggagtggctatgggctgcgccgcc
gcctcacttaccccaccaaacatcagcgctgcttctttagaggtcgatggcatgagaccc
agcgccatggtgtcactcccggtcgctcctggtaacgccaagcctcttggtgccaccgca
gcaaatcaggctcctgcttgtaaactagataaggactgcaagagggagaagaaaggcctg
ttgaagctgttgtcaaataaaaagaaactccgcccctctcccccatcttccccaactctg
gaggcggagcaagccgttgccgcggacatgccgcaaggtgccatggcacctgaaatgccc
gtgccaaactcaacagcagtggccagtggaaaccattcccggaccgggccctgtcctgtg
gaggctgagacacctgcagcttcatcatcaacatcatcatcatcaaatactgatgctgca
cgcaggagtggctgtcaggaaaactccgcccccattgcaccgccaccacggcaaccatgc
tcctctctcctgtccatgcaacacgacggacggccaatagtgtgtgaaaggtaccgtgtg
gtggtgtcttaccctccacagagcgaggctgagctggagctgaaggagggcgacattgtg
tttgtgcacaagaagcgcgaggacggctggttcaaaggcacactccagaggaacggccga
accggcctctttcccggcagcttcgtcgacagcatctga
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