Pangasianodon hypophthalmus (striped catfish): 113529215
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Entry
113529215 CDS
T05759
Name
(RefSeq) contactin-4-like
KO
K06761
contactin 3/4/5/6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113529215
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
phyp00537
]
113529215
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
Contactins
113529215
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
phyp00537
]
Others
113529215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_4
Tissue_fac
C2-set
Motif
Other DBs
NCBI-GeneID:
113529215
NCBI-ProteinID:
XP_026774067
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MMKMTILLSRVALTLLSLKCYLAERNIQHGPVFTQEPSDSVFPLSSEDNKIFINCKAKGN
PPPHYRWKFNGRDLNVYSDLNYSLVEGNLLINNPQAMKDGGSYQCIATNAFGTILSRKAK
VDFAYLQNFTNKARNAVLVREGQAVVLLCGPPPHFGEIRYAWIYNGHPSVLIQDNRRFVS
QRTGNLYIAKVEPSDVGNYTCVVKNMMTNGTVYSSPTPLVLRRDAVMGEYEPKIEVQFEE
LLRVIKGSSVRLECFALGNPVPSISWRRADGSPFPGKMKINQSNGVLEIPYFRPEDAGFY
ECVAENSRGRSVAKGHLIFNDVEHLHWAQTLRDAYMAIGADLHWECRANGKPQPVYRWLK
NGQAIVSEDRIRINGGKLMLSKVNLEDSGMYQCLAENEHGVVYASAELKVVASPPDFSKG
PVKKSTLVQRGGEIVIECRPHASPKASITWRKEGEVLKNSERRTISEDGTLRITNVSESD
AGRYTCMAHNLFGVASSTGTLVVKEPTKITVPPLSMDATVGESIVLPCRVSRDSNMDFIF
KWFFNGKLVDFSRHEHFEMIGGGASGDLMVRNVQLKHSGKYVCMIHTAMDSVSAAADLIV
RGPPGCPDQVLVGEVTDRTVQLSWSPSPDNHSPITHYIVQSRSDFSIGWQAVKTVPDSVP
GQMTHAIAVGLSPWVQYEFRVAAMNSVGMGEPSAPSEAVLTKAAVPEVAPANVSGGGGSR
GELVIVWEPVPEELQNGDEFGYVVAFRLLGSLVWMQSVVPSVDASRYVFKNDSFPALSRF
EVKVGVYNSIGEGPYSPVSVIYSAEEEPSIAPTKVWAHSLSSSELQVFWDPILPSHSKST
ISGYEVLLWEEGSLESKAMKERVIRSPAHITGLKGGTLYLISVRAHNSGGVGPASAAINM
TTKKPPPSQPPGKIEWNLTNSKIFLQWQQVKAMDNESEVTGYKVMYHQNWHKGTSIVETN
QTSLELQVPAGEDLLIQIKALSDGGDGSYSSPIHIPKMSNLNSRGYFSSDANKMVHVHEV
AFLILSWLLL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagatgacgattttactatcacgggtggcgctaaccctgctgtcactcaaatgc
taccttgcagagagaaatattcaacatggacctgttttcacccaagagcctagtgacagt
gttttcccgctgagcagtgaagacaacaagatattcatcaactgcaaagccaaaggaaat
ccgccgccgcattacaggtggaaattcaatggaagagatctcaacgtttacagtgatttg
aactacagcctggtagagggcaacctcttgatcaataacccgcaggcgatgaaagacgga
ggatcttaccagtgtattgccactaatgcctttggaaccatcctaagccgcaaggccaaa
gtggactttgcctatcttcagaatttcaccaacaaggccagaaatgcagtcttggtgaga
gaaggccaggctgtggtgctgctgtgtggcccaccaccccattttggagagattagatat
gcatggatctacaatggccatcccagtgtcctcatccaagacaatcggcgctttgtgtcc
cagaggacagggaacctgtacattgctaaagtggagccgtctgatgtgggcaactataca
tgtgtggtaaagaacatgatgaccaatggcaccgtgtacagctcacccactcctttggtg
ctgcgccgggatgctgtgatgggtgaatacgagcctaaaattgaagtccagtttgaagaa
ctgctgcgtgtcatcaaaggatcatcggttagactggagtgcttcgctttaggaaatcca
gtgccttctatctcttggagaagagcagacggaagcccttttcctggaaagatgaaaatc
aatcaatcaaatggcgtcctggagatcccttatttccggcctgaggatgctggcttttat
gaatgtgtggcagagaactccagaggccgtagtgttgcaaaaggacacctcatatttaat
gatgtggaacatctgcattgggcccagacactgcgtgatgcctacatggccatcggtgct
gatctgcactgggagtgcagggctaacgggaaaccccagccagtgtacagatggcttaag
aatggacaggccatcgtgtccgaggacagaatccgcattaatggaggcaagttaatgctc
tctaaagttaacctagaggattctgggatgtatcagtgtttggcagagaatgagcatggt
gtcgtttatgccagcgctgaactcaaagttgtagcttctcctccagacttttctaaaggt
ccagtgaagaagtccacattggttcaaagaggaggtgaaatcgtcattgagtgccggcca
catgcatctcccaaggcctccatcacatggaggaaagaaggcgaggtgctgaagaacagt
gagagaaggacaatctcggaggacggcaccctgaggattaccaatgtgagtgagtcagac
gcaggtagatacacgtgcatggcgcacaacctgtttggcgtggccagcagcacgggaaca
ctggtggtcaaagaaccaaccaaaattacagttcctccactgagcatggatgccacagtg
ggtgagagcattgttctgccatgcagggtgtccagagactccaacatggacttcatcttc
aagtggttcttcaatgggaaacttgtcgatttcagccgccacgaacactttgagatgatt
ggagggggagcatctggtgacctcatggtacgtaacgttcagctaaaacactctgggaaa
tatgtctgcatgatccatacagcgatggacagtgtctcagctgcagctgatttgattgtc
agagggccccctggttgccctgaccaagttttggtgggggaagtcactgaccggacagtt
cagctctcatggagtcccagtcctgacaatcacagccccatcacacattacatagtgcag
tcccgaagtgatttctctattggttggcaggctgtaaaaacagttcctgattctgtgcct
ggacagatgacacatgccattgcagtgggtctgagcccgtgggttcagtatgagtttagg
gtggcagccatgaacagtgttggcatgggtgagcccagtgccccatctgaggctgttctc
actaaggcagcagttcctgaggttgctccagccaatgtgagtggaggtggtgggagccgt
ggcgaactggtgattgtgtgggagcctgttccagaagaactacagaacggagatgaattt
ggatatgtggtagcctttcgtttacttggttctctggtctggatgcaaagcgtggtgccc
tcggtggatgcatcccgatatgtgtttaaaaatgacagctttcctgcactctcacggttc
gaggtgaaggtgggagtttacaacagcattggagaaggaccctatagccctgtatcggtt
atctactcagcggaggaagagccctctatagcccctaccaaagtgtgggcacatagtctt
tcctcctcagaactgcaggttttctgggatcccattctgccaagccatagcaaatccaca
atctcagggtacgaggtgctgttgtgggaggagggctcattagagagcaaggcaatgaag
gaaagggtcataagaagcccagctcatatcacaggcctgaagggtggcactctgtatcta
atctcagtcagagctcacaacagtggtggagttggacctgccagtgctgccatcaacatg
actacaaagaagccacctccaagtcagcctccagggaagattgaatggaacttgacaaac
tccaagatttttttgcaatggcagcaagtaaaggcaatggacaatgaatctgaagtaaca
ggctacaaggtgatgtaccatcaaaactggcacaaaggcaccagcatagtggaaacaaat
cagacatcattggagctacaggttccagcaggagaagatctgcttatacagatcaaagcc
ttgagcgatggaggagacggcagctacagcagtccaattcatataccaaagatgtccaat
ctgaactcaaggggctacttcagctctgatgcaaacaagatggtccatgtccatgaagta
gcatttcttattctatcatggctgcttctgtag
DBGET
integrated database retrieval system
