Pangasianodon hypophthalmus (striped catfish): 113529273
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Entry
113529273 CDS
T05759
Symbol
dmxl1
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113529273 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113529273 (dmxl1)
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113529273 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
113529273 (dmxl1)
RAVE complex
113529273 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_EML
TORC_M
NBCH_WD40
MC5
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
113529273
NCBI-ProteinID:
XP_026774153
LinkDB
All DBs
Position
Unknown
AA seq
2988 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSINNVPFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV
GCVDCSQQGQIAASYGNIVCIFEPVPISPKEKMPMKLNYHWQKTGQFVLQSIAHNIAWSP
TGTSLLTGSSCLQLWSNVNICGGAEEGMGSDPLSSWRCIWQCKTASPVHLIKFCPDGEFF
ATAGQDDCLVKVWYSMSKWQSDATKLFTPPELNSQGKPDFSFIYLAHPRSVTGFSWRKTS
KYIPRGAVCNVLLTCCKDSVCRLWAETLLPSDCLLSGLRQTHGSSNNDTVKSSNTKKAHY
NNKGHSRNLPELAELNRGPVRGMAHARLLPQQQNKHHAHRATIAHANALCHFHIAASINP
ATDIPLLPSISSLSGSDDEEPGGPFNVHWLNNKELHLTLTMEVFLQQLRSSLEHQNPPQA
SQADDDYDEEGNGIGPESKKGETSFKNGASVSLPKAAVNHQVEVLLNDWNRGADMLFSIH
PMDGSLLVWHVDWLDEYQPGMFRQAQVSFASRIPVAFPTGDAISLSRSVVMYACNKNVDL
AIQHGRQRPQGVQRSSSVLIGLGQGKQCPTGLRLSIFTPHVLMISKHSDGSLNQWSVSFA
EGSAFSTVLSVSHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNAKVCNPIAHSGPGPVSA
GQRSRSSLGAVPQDPNAIYSELILWRVDPVGPLSFSGGVSELARINSLHASAFSNVAWLP
TLIPSNCLGAYGNSPSACFVASDGHSLRLYQAVIEAKKLLSELSNPEISKYVGEVFNIIS
QQSTAKPGCIIELDAIMDFQGKETQLLHVFEENLILGNEKKDDCSQELPPAENTSGLALF
WARFFLVVIEFTQSRKSILHMWHLHLAAVPVTMGERLQPLLVKTPWLHHLSATCKMXSPS
AHKSPLSRSNLRSACRLTLVKERVFSQELKLPEGIEVISATPAAGHLSSSSLQPTGRAPY
LLATACTDGTVRFWSCSVVSDNDKTLDTTPYIWEEWPLLVEEGLPNSSAVNIPDRPVGIS
CCHTSRVAVAYRYSKPSSLAKKSLIHVSIFQCESTGGSQWMLEQTLELDISNSLTNNGSD
KHLPVPSFQDGLVSTGDCLHSSGKSLVHLDWVSREDGSHILTVGLGSKLYMYGLLSGKPP
ELGLSDNSREHCSSRLVLLRVVDLVSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQW
QPAALAKSTLTAGDVNGGSMCSLSTAPKQEGLSLQPSKKTLTRSMTSLAQKLSGKRTMYD
LPAEMEDYGLFEAAHHLFPTLPQYHPVQLLELMDLGKVRRAKAILSHLVKCIAGEIVTLK
DTNVNQERRLRSLTISASGSTARDPKMFNKTESSDYTEIDSIPPLPLYALLAADDDTAPC
AKGKTSSVSGDSGHGSSRADTYDELFQTSPVSLDDMDLLDGEEEDAKAKVIDLSKYSPTF
FGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALADTISSTSTDIGESQGKGQGGETLDECG
LKFLLAVRLHTFLLTSLPPVHRAQLLCQGLSTCHYTWAFHSEAEEELLNMLPCMQKGEPT
WPELKAMGVGWWLRSTNKLRRCIEKVAKASFQRNNDPLDAALFYLAMKKKAVVWGLYRSH
KNVKMTAFFSNNFNEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQ
DLQLALVISRLYESEFETSSTYKKILQRYVLGHDHQIPMHQDPFLRSMAYWVLDDYSRAL
DTLLEQPNPNVDALHQESSPCKPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTGQGSMA
DSISLTERRLFFTTAYAHLQAGCPMLALDVLSKMPSVIKKSKMLHNLEQPSPTCSGPDNP
DSESGKDQASTLDWSQPMFNGFGSVSDSLSSPQDDHSHSDSVLSFDWTQPSITLQDEPLE
LKWDSDKEESEDEEAGLAMKKIKPESSADAPDSTSMSTDVTVDNSLVLFEDILAARLKFI
SCLKMLTAELRTLSTGYELDGGKLRHQLCHWLEREVVALQKCCGYNPYLQQVAGSISVEH
LGQVSGASGDEQEYQGTAEQVREVQHRRRLWLQRNQPLLRIFLSYCSLHGSHGGGLASVR
MELILLLQESQQDDSSQVPVQQQASVPLLLACTASSKTVVANPIVHLTNLTHDILHTINA
LDSPPHPDVINNEIYVMHTLAASLSACIYQCLCDGHSYSHINQFTGTVYESILLSHQHPA
RTLSMDEAVIPNTSPAQWPGVSTLVRLLGAAAEENQPSVGVLLCEILTAVFLSLFVHGLA
THSSNELFHIVAHPLNSKLWVAVFGGGARLPVAGKSSKASAPAVMEDQEWKQKRFRLHSS
RSSSREVPDSPVSPSPIIEQEASIFKECFVPPELSVWDYFIAKPFLPQSVSQVEYDSEES
QGSDEEEEEDGYGEAFDPNSPFHEHSNNNSYSWCLMRLTMVQLVLVNLKSFYPMAGYDLL
DLPVCSPLCHSVIKTLQRWEQVLLKRLEIFGGPPSKYISTHPVDGTMASGPALLRHKALF
EPSNTPFRSRHHSALSVKRLWQYLVKQEEVQETFIRNIFTKKRDRTESVEDYTDSMRYSG
MEEPGLNQIEADLGYAGGKARIIHKESDIITAFAINKANRNCLVIASTHDIQELDVSSIL
ATQILTWIDEEAETEVKGDDFLVVQTRDDFTTLHGTTPYTRSSPGTPINMPWLGGHQTGR
GAAMLIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIR
FNYQGNKFGIVDADGALSLWQTNTSGNTPKPYLTLQCHNKTANDFVFVGSSSLIATAGLS
TDNRNVCLWDTLVMPSNSLVHGFSCHESGATVLALAPKQQLLLSGGRKGWISVLDLTLKL
QRQSFQAHDSAVKALAVDATEGCFISGSAEGNIKVWNMLTQCLLHTFPNEHARQSIFRNL
GTGVMQIETAPGNHIFSCGADGTMKMRVLPDRVSTYTNNVKNDVKFII
NT seq
8967 nt
NT seq
+upstream
nt +downstream
nt
atgaatctacaccaagtactcactggggccgtcaaccccggagacaattgtttctctgta
ggaagcataaacaacgtgccgttcacggcctatgcctctggctgtgacatcgtaatcttg
ggaagtgactttgagaggcttcagatcatcccaggtgccaagcatgggaacatccaagtt
gggtgtgtggactgttctcaacaaggacagattgctgcgtcctatggaaacatcgtttgc
atatttgagcctgtgccgataagcccaaaggaaaagatgccgatgaaactgaactatcac
tggcaaaagacaggccagtttgttttacagtctatagcacacaacattgcctggagcccc
acaggcactagtcttttgactgggtcaagttgcctacagttatggtccaatgtgaatatc
tgtggtggtgctgaagaggggatgggtagtgaccctctgtcttcttggaggtgtatatgg
cagtgcaagactgcctcacctgttcacctaattaagttttgcccagatggagagtttttt
gccactgcagggcaggatgactgtttggtaaaagtgtggtacagcatgagcaaatggcag
tctgatgccacaaagctgttcaccccacctgaactcaactcccaagggaagccggacttc
tccttcatctatctagctcatccacgctcagtcactggcttctcctggaggaaaaccagc
aagtacatacccagaggtgccgtgtgtaatgtgttactgacctgctgtaaagacagtgtg
tgtcggctatgggctgaaacactgctgcccagtgactgcctgctctctggactaagacaa
actcatggcagcagcaacaatgatacagtgaaatccagtaacacaaaaaaggctcattac
aataacaaaggccacagtcgaaacctgcccgagctggcagaattgaatcggggaccagtc
agaggtatggctcacgcaaggcttctccctcagcagcagaataagcatcacgctcacaga
gccaccatcgctcacgccaatgcactgtgccacttccacattgctgctagcatcaaccca
gccacagatattccgctgttgccctccatatcatctctgagtggttcagatgatgaggag
cctggtggacccttcaatgttcactggctcaacaacaaagagctgcacctgactctcacc
atggaggtgttcctccagcagctcaggagcagtttggagcatcagaacccaccacaggct
agccaggctgatgatgactatgatgaggagggcaatggtataggccctgagagcaaaaaa
ggagagaccagcttcaaaaatggagcctcagtttctcttcctaaagctgcagtgaatcac
caggtggaggtgttactgaatgactggaacaggggagcagacatgcttttcagcatccac
cccatggacggatcactactggtgtggcacgttgattggctggatgaataccaacccgga
atgttccgacaggcacaggtgtctttcgcatcccgaatccctgttgccttccctacgggt
gatgctatctccctcagccgcagcgtagtgatgtatgcctgtaacaaaaatgtggatttg
gccatccagcacggtcgccagcgtccccaaggcgtacaacgctcctcttcagttctaatt
ggcctgggccagggaaagcagtgcccgaccggcctgcgcctgagtatcttcacgccccat
gtgctgatgatctctaagcattccgatggctcgctcaaccagtggtcagtgagctttgct
gagggctcagccttctccactgtgctcagcgtttcacacaagtcacgctactgtggccat
cgcttccacctcaatgacctggcctgccactctgtactgcccctgcttctaaccacctca
caccacaatgccaaggtgtgcaatcccattgcccactcagggcctgggccagtttctgca
ggccaaagaagccggtcatccctgggtgctgttccccaggacccaaatgcaatttatagt
gaactaatactatggagggtggatccagttggacccctctcattttcagggggtgtgtct
gagctggccagaatcaactcgctccatgcatcagccttctccaatgtggcctggcttcca
actctcatcccaagcaactgccttggtgcatatggcaactcgccaagcgcctgttttgta
gcaagtgatggccattccttgagattgtatcaggcagttattgaggctaagaaattgctg
agtgaactttccaatcctgaaatatctaaatatgtgggagaagtattcaacatcataagt
cagcaatctactgcaaagccaggctgcatcattgagcttgatgccatcatggactttcaa
gggaaagagacccagctgttacatgtgtttgaggagaacctgatcttgggaaacgagaaa
aaggatgactgctcacaggagctcccgcctgctgagaatacctctggcctggcactgttc
tgggcacgcttctttctggtggtgattgagtttacccagagcaggaaatcgatcctgcat
atgtggcatctgcatctggcagcagtacctgttaccatgggtgagagacttcaacccctg
ctggtaaagacaccgtggcttcatcatttatcagcaacttgcaaaatgnactcaccatca
gcccataaatcaccacttagcaggtccaacctgcgaagtgcctgtcgcctcacactggtc
aaagagagagttttcagtcaggagctgaaacttccagaaggcatagaggttatatctgcc
acaccagcagcaggccacttaagctcgtcatctctgcagccaactggccgggccccatat
cttcttgcgacggcttgtacagatggaactgtgaggttctggagttgtagcgtagtctct
gacaatgacaaaactcttgacacaactccttacatctgggaggaatggcctttgctagtg
gaagaaggtctccccaatagcagtgcagtgaacattcctgacaggcctgtgggcattagc
tgctgccacactagccgagtagcagtggcatacaggtactcaaagccttccagccttgcc
aagaagtccctcattcacgtgagcatattccagtgtgaatccaccggagggtcccagtgg
atgttggagcaaacacttgaactggatatttcgaatagtctgacgaacaatggctcagat
aaacatctgcctgtgcccagcttccaggacggtttagtgagtactggggattgtttacac
agcagtggtaaaagtctagttcatctggactgggtttctagagaggatggttctcacata
ttaactgtaggtctcggctccaaactgtacatgtatgggctgctttcaggaaaacctcca
gaactggggctgtcagacaacagcagggagcattgctcttcacggcttgttctgttgcgt
gtagtggacctagtctcctctgtagagggctctttgccaatcccggtctccctgtcttgg
gttagagatggcattctggttgtgggcatggactgtgagatgcatgtctactctcagtgg
cagcctgcagcattagccaaatcaacactgactgcaggtgatgtaaacggtggcagcatg
tgctcacttagcacagctccaaagcaagagggactgagtctccagccttctaaaaagact
cttaccaggtccatgaccagcctagctcagaagcttagtggtaagaggacaatgtatgac
cttccagctgaaatggaagactatggcttatttgaggcagcacaccacttgtttcctacc
cttcctcagtatcatccagtgcagcttttggaactaatggacctaggcaaggtgcgacga
gccaaagctattttgtcccatctggttaagtgcatagctggagagattgtgactctaaag
gacaccaatgtcaaccaggagcgtcgtttacgatcactcactattagtgctagtggcagt
actgccagggatcccaaaatgtttaacaaaactgagagctcagactacacagagatcgac
tccatcccaccattgcccctgtatgctctgcttgctgcagatgatgatacagccccctgt
gctaaaggcaaaacatccagtgttagtggggacagtggtcatggttccagccgagcagac
acttatgacgagcttttccagaccagccctgtgagcttggatgacatggatctcttagat
ggtgaggaggaagatgctaaagctaaggtcattgatctgtcaaaatacagtcccactttc
tttggccctgagcacgcccaggttttgtcaagccatctgcttcactctagcctacctggg
ctgacacgaatggagcagatgtcactcatggccttggctgataccatttcctcaaccagc
acagacattggggagagtcagggaaagggtcaaggtggagagacgctggatgaatgtggc
ttgaagttcctgcttgctgttcgtttacacactttccttctgacatcattacctccagtg
catcgtgcacagctcctctgccaaggactgtctacatgtcactacacctgggcatttcac
tctgaagctgaggaggaactgctcaacatgctgccctgcatgcagaaaggagaacccacc
tggcctgaactgaaagccatgggtgtaggatggtggctaaggagcactaataagcttcgc
agatgcattgaaaaggtagcaaaggcctcttttcaaaggaataacgatcccctggatgca
gccctgttttatttggctatgaagaagaaagctgtggtctggggactgtacaggtcccac
aagaatgtgaagatgacggctttcttcagtaacaacttcaatgaggaccgatggaggaag
gctgcattgaagaacgcattctctctacttggaaagcagagatttcagcactctgcagcc
ttctttctgttggcaggttccctcaaggatgctgttgaggtttgcctggagaagatgcag
gacctgcagttggccttggtgattagcagattatatgagtctgagtttgagacatcctcc
acttataagaagattctacagaggtatgtgttgggtcatgaccaccagattccaatgcac
caggatccctttctacgtagtatggcatattgggttctagatgattacagccgagcactg
gatactttacttgagcaacccaacccaaatgttgatgctttacaccaagaatcatctcct
tgcaaaccagaggttttcaacttctacacctacctcagaacccatccactgctccttcgg
cgccattttggatcctcagataaagctaaagtgggtctgactggacaaggcagcatggct
gactccattagtctcacagaaaggagactgttcttcactactgcttatgctcacttacaa
gctggctgccctatgttagctctagatgtcctctccaaaatgcccagtgtcattaagaaa
tctaagatgctgcacaacctagagcagccttcaccaacatgtagtggtcctgacaatcca
gacagcgaaagcgggaaagaccaggcctctacacttgactggtcccaacctatgtttaac
ggctttgggtctgtctcagacagcttatcttctccacaagacgaccacagccactcggac
tctgttttgagcttcgactggactcagccttccataactttgcaagacgagcctttggag
ctgaagtgggacagtgacaaagaagaatctgaagatgaagaagctggcctagcgatgaag
aaaatcaaaccagagagctctgctgatgctcctgactctacctccatgtctacagatgtc
actgtagacaactccctagtccttttcgaggacatcttagctgctcggctgaaattcatt
tcctgcctgaagatgctaactgccgagctgcggactctctccaccggttatgagctggat
ggtggcaagctgcgccaccaactgtgccactggctggagcgtgaggtggtggcccttcag
aagtgttgcgggtacaacccctaccttcagcaggtggccggaagcatctcggttgagcat
ctcggccaagtcagtggtgcctctggagatgagcaagagtaccaagggaccgcggagcag
gtcagagaggtgcaacacaggcgcagactgtggctccagagaaaccagcctctgctacgc
atcttcctaagctactgcagcctacatggttcccatggaggaggtttggcttcggtcagg
atggagctgattctgcttctgcaggaatcccaacaggatgacagttctcaggttcctgtt
cagcagcaagcatcagtccctctcctgctggcttgcactgcaagctccaaaactgtggtg
gccaatcctatagttcatctgaccaacctgacacatgacatactgcacaccattaatgct
ctggactctcctcctcacccagacgtcattaacaatgagatctatgtgatgcacacgctg
gcagcttctctgtccgcctgcatctaccagtgcctctgtgacggacacagttacagtcat
atcaaccagttcacaggcactgtctacgagagcatcctgctttcccatcagcaccctgcg
cgaactctcagtatggatgaagcggtcattcctaacacctctccagcacagtggccaggt
gtcagtactttggttcgtctcttgggtgcagcagcagaggagaaccagccaagtgtgggt
gtgcttctgtgtgagatcctcacagccgtcttcctcagcttgtttgtgcatggcctggcc
acacactccagcaacgagctcttccacatcgtggctcatccgctcaacagcaagctgtgg
gtggctgtgtttggcgggggggctcgccttcctgtagcaggaaaatccagcaaggcatca
gccccagctgtgatggaagaccaggaatggaagcagaagcgtttcaggctgcattcttcc
aggagcagctccagggaggtaccagacagcccagtcagccccagccctataatagagcag
gaagcatccatttttaaagaatgctttgtgcctcctgagctcagcgtctgggactacttt
attgcaaagcctttcctgccacaatctgtaagccaagttgagtacgattcagaggaaagc
caggggagtgatgaggaagaagaagaagatggttatggagaggcttttgaccccaattct
ccttttcatgaacattccaacaacaattcttatagctggtgtttgatgcgcttgaccatg
gtgcagctagtgctggtcaacttgaaatcattctatcccatggctggctatgacctcttg
gatctacctgtatgctccccactgtgccactcagtgattaaaacactacagcgctgggaa
caggtgttactcaagagactggagattttcggtgggcctccttccaaatacatctccaca
cacccggttgatgggaccatggcatctggaccagctctcctcagacacaaggccttattc
gagccctctaacacaccattcaggtcccgacatcattctgcactttctgttaagagactc
tggcagtacctagtaaaacaggaggaggtgcaggagacttttatccgcaacatctttacc
aaaaagcgggatcggacagagtcggttgaggactacactgacagcatgaggtattcaggg
atggaggaacctggtctcaatcagattgaggcagatctgggttacgctggaggcaaagca
cgcatcatccacaaggaatctgacatcatcactgccttcgctattaacaaggccaatcgt
aactgcttagtaattgcgtccacccatgacatccaggagctggacgtgtcctccatcttg
gccactcagatactgacatggattgatgaagaagcagagacggaagtgaaaggtgatgat
ttcttggtggtccagacccgggatgactttaccactttacatggcacaacaccctacaca
cgcagcagccctggcactcccattaatatgccctggttgggtggccaccagactggcaga
ggagcagccatgctaatcaaacgaaacattaacaacgtcaggaggatgacgtcccaccct
acccttccatactacttaacaggagctcaggatggcagtgtgaggatgtttgagtggggc
cattcgcagcagattatctgctttaggagccctggcaactccagggttacgaggatcagg
tttaactaccaggggaataagtttggtattgttgatgcagatggagctcttagtctctgg
cagacaaatacatcagggaacacccctaaaccctacctgacactgcagtgccacaacaaa
acagctaatgactttgtgtttgtgggctcatcatctctcattgccactgcaggcctttcc
actgacaacagaaatgtgtgtttgtgggatacactggtcatgccatccaacagcctggtt
catggctttagctgccatgagtctggtgccactgtgctggctcttgctcccaaacagcag
ctgctgctcagtggagggaggaaaggctggatcagcgtgctggacctcacgcttaagctc
cagcgccagagcttccaggcccatgactcggctgtcaaagcgctggctgtggatgcaact
gaaggctgtttcatcagcggctcggctgaaggcaacatcaaggtgtggaacatgttaacg
caatgcctactgcacacgttcccgaacgaacacgcccggcagtccatcttccgcaactta
ggtacaggcgtcatgcagatcgagacggcaccaggcaaccacatcttttcttgtggtgct
gacggcaccatgaaaatgcgtgtcctgcctgaccgtgtcagcacgtacaccaacaatgtg
aagaatgatgtgaagttcatcatttag
DBGET
integrated database retrieval system
