Pangasianodon hypophthalmus (striped catfish): 113529323
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Entry
113529323 CDS
T05759
Name
(RefSeq) uncharacterized protein LOC113529323 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113529323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113529323
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113529323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
113529323
NCBI-ProteinID:
XP_026774244
LinkDB
All DBs
Position
Unknown
AA seq
1377 aa
AA seq
DB search
MPLISLDDEDQRWVPTHVNVTVLRARALRTKGKQGSRYVYTVIQLGKLKYTTGLAEKGAE
PEWNEECSLELQPGLLECVGAHPPGSGDLILTVMLRVLIGLDVFLGEAVVPLDKVFQGGT
CPRNEWLKLHSKAGRKEKERGELQLTIQFTRNNMTASMYDLTIQDKPRSAFGKLKDRVTG
KKRGDMESSSAILPGRYAALSSSTSQSFQEDGGGRDSVQEECTDEGKSKVKGFFLKGKLR
KNSDTRSCSSLASESSMASSAGDPFVPVELCSTPVYSSRVMEPFRTDSDGGVKVFTDPKV
MTHKRAHSDEASKITVASRPSTAVESVKGQNMLLSKSTLCINGSHVYSEPIYSKGPGSLP
IKRTLLEKCSPLSRSLQNLTRRSEDTQRRSSIDKSKKELEGEAEGFSAPMVEVTTSEGKP
VHATAPLMMASSTTDVSDKGKKLRKTLFSSGRSDSLPAKPEQGQEGRLRGWFGSSDTQNK
PRLGVPPKVESSPETSASLPPCNPTLPPRSLPLVSATSHMSSSPVGPHTNPFSHPSPPPP
CISPTNPFLTRLQRNPFFEELIAEEALKSPPAISGYPNSPFNHYPAFPVRSGLSRTIRDS
TPNKMSSIKRERPRSVARQRSLPALMPGTPETVTVNSNNAMQASRPLSESRGEWDEFEAL
ASSRLKSPVGTPTRPPSATIPPSLPNPYPVEYCSIKQKMGVIVDERISKDCNLPALASRR
PVRTPVPFQERCSDSWLDRAQELAVQKEACLLFQTDLASLRHRERHRDTNTKGSQLGKDL
HCTTLEQNVNVYLPSHTVQMPRDENGQEKIFLERGQNIALKNSQYGYEHIQKNSQHSASD
HTVPNTPFCLSDCDTTVSESLCSDFQVQINPESSSELKPFSDQQIEHIITTGDITTPDSN
NNNTNGTSQFAFIDCDSSPSDVNQTTFGMIDKDCNKASTQCPGATDFDSSGILSVCGFSS
VSPQDLLNRMAELEPFSPKETPDTVVISGMSNNNHYEKPCDNLEQHSIQPHSNFTARVES
EDPNHKESSVSPQTIPQRDGDDRSVTAQLQPEATEDNMGLDAPHEVGCCLIYDKIKTKTA
ELKPEANSSNVPVSESHKISESPLTLSDGISFEDLHARVAPRGSRSPSKTEVRSARIRTR
STTNSPKTDPSTVLSTVSSDVSSTKPSLSDLLLHKSPSPSFSHPNATSDPSLSSLMHCPT
TRPSLGSTLAEASYTTSTLQLQATAKHTLTPEEAEPASSRPPAEESSPHPVKPLTSTAVP
GEKKSVLEKLRSSIHPGRSTQQSIAEPEKPQVCMSEAHTYYQTLSNMELIALLLQQEMDA
ERQRAESELQATLLEKREAELKKLKVQVRDLEDYIDKLLVRIMEQTPTLLQVRGRPK
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgatcagcctggacgatgaggatcagagatgggtcccgacccacgtcaacgtg
accgtccttcgggccagggcgctgcggaccaagggcaagcagggcagccgctatgtgtac
accgttatccagctggggaagctgaagtacacgacgggactggcggagaaaggggccgag
cccgagtggaatgaggagtgctcgctggagctgcagcccggcctgctggagtgtgtgggc
gcgcatccgcccggcagcggggatctcatcctcaccgtcatgctccgcgtgctcatcgga
ctcgacgtgttcctcggtgaggccgttgtgcctttggataaggtgtttcagggagggacg
tgtcctaggaacgagtggctaaagttgcactctaaagctgggaggaaggagaaggaacga
ggagagctgcagcttaccatccagttcactcgcaataacatgacagccagcatgtatgat
ctgaccatccaggacaagccacgctcagcctttggcaagttgaaggatcgtgtcacaggc
aagaaaagaggagacatggagtcctcctcggccatcctccctggtcgctatgccgctctg
tcaagctcaacgagtcagtccttccaggaggatggtggggggagggactcagttcaggag
gagtgtactgatgaaggcaagagcaaggtgaagggcttctttctgaaggggaagttgcga
aagaactcagacacacgctcctgttcatcattggcctcagagagcagcatggcgtcatca
gcaggggatccttttgttcctgtagagctatgcagcacacctgtctacagcagcagagtc
atggagcctttccgcactgactcagacgggggagtaaaggtattcacggatcctaaagtg
atgacccacaagcgggcacatagtgatgaggccagtaagatcacagttgcctcacgtccc
agtacggctgtagagagtgtaaaaggccagaacatgctgctctctaagtccaccctctgc
atcaatggcagccatgtttactctgagcctatctactccaaaggacctgggagtctgccg
atcaagcgcacgctactagagaaatgctctcctttatcacgctcgctgcagaatcttacc
cgccgcagtgaagacacacagaggcgtagctccattgacaagagcaaaaaggagcttgag
ggagaggctgagggcttctcagccccaatggtggaagtcaccacctcagaggggaagcca
gtgcatgccactgcccccctgatgatggcttcttccactacagatgtctcagataaaggg
aagaagctgaggaagaccctgttctccagcgggaggagtgactctctcccagccaaacct
gagcagggtcaggagggacgtctgcgtggctggttcggctccagtgacacccaaaacaag
ccaaggctgggagttcctcctaaagtagaaagcagcccagaaacatccgcttccctccct
ccctgcaaccccacgctaccaccacgctctcttcctctagtttctgctactagccacatg
tcatcctctcctgttggccctcacactaatccattctcccatccctcaccgccaccaccc
tgcatctcccctaccaaccctttcctcacacgactgcaaaggaaccccttttttgaggag
ctcatagccgaagaagctttgaaatctcctcctgcgatttccggttaccccaactctcca
ttcaaccattacccagcattccctgtgaggagtggcctttcaagaactatccgtgatagt
acaccaaacaaaatgtcctctataaagagagagaggcctcggagtgtagctaggcagagg
tccctccctgccttaatgcctggaacaccagagacagtcactgtgaactctaataatgca
atgcaagcaagccgtcctttatctgagagtaggggggaatgggatgaatttgaggctttg
gccagtagccgtcttaaatcgccagttggaactcccactcgaccaccctcagccacaatc
cctccttcacttcctaacccttatccagttgaatactgcagtattaaacaaaaaatgggg
gtcatagttgatgaaagaatctccaaggactgtaacttacctgctttagcctcccgaagg
ccagtgaggaccccggtgccctttcaagagaggtgctcagacagctggctagaccgggca
caggagcttgctgtccaaaaagaagcttgcctgctctttcagacagatttggcctcacta
cgacatcgagagagacatagagacacaaacaccaaaggttcccaattaggtaaagacttg
cactgcactactctggagcagaacgtgaatgtttatctgccttcacatactgtacaaatg
cccagagatgaaaatggacaagagaaaatttttcttgagagaggccaaaatattgcactg
aagaattcacaatatgggtatgaacacatacagaaaaactcccagcattctgcaagtgat
cacactgtgcccaatacgccattttgcctctcagactgtgatacaactgtgagtgagtca
ctgtgcagtgactttcaggtccagattaatccagagtcctcctctgaactgaagcccttt
tctgatcaacagattgaacacataatcactactggagacatcactactccagattccaat
aataataatacaaatggcacctctcagtttgcttttattgattgtgacagctcaccttca
gatgtgaaccagactacttttggaatgatagataaagactgtaacaaggcgtcaacccag
tgcccaggtgctacagattttgattcctctgggattttgtcagtatgtgggttctcctca
gtgtcccctcaagatttattaaacagaatggcagagctagaacctttttccccgaaggaa
actccagatactgttgttataagtggaatgtccaacaataaccattatgagaaaccctgt
gacaacttagaacaacatagcatccaaccacattcaaattttactgcaagggttgaatca
gaggatcccaatcacaaagagagctctgtaagtccacaaacaatcccccaacgagatggg
gatgacagaagtgtgacggcacagcttcaacctgaggcaacagaggacaatatgggctta
gatgctccacatgaagttggatgctgtctgatttatgacaagattaagactaaaacagct
gaactcaagccagaagcgaatagctccaatgttcctgtttcagagagccacaagatcagt
gagtcacctttgactctctcagatggcatcagttttgaggacttgcatgcccgagtagca
ccgagaggctcaagaagcccttccaaaactgaagttagatcagcacgcattagaacacgt
tccactacaaactctcccaagactgaccccagtacagttttatcaacagtgagctctgac
gtcagttcaaccaaaccttcactgtcagaccttcttttgcataagagtccatccccttct
ttctcccatcctaatgccacttctgaccccagcctgtcctcgcttatgcattgcccaacc
acaaggcccagtttgggaagcactctggccgaggcctcctacaccacctccacactccag
ctgcaggctactgcaaagcacacacttaccccagaggaggcagagccagctagcagtcgc
cctcccgctgaggagagcagcccccatccagtgaagcctctgaccagcacagcagttccg
ggagagaagaaatcagtgctggagaaactgcgctcctccatccaccctggacgctccaca
cagcagagcatagctgagccggagaaaccccaggtgtgcatgtcagaggcccacacttac
taccagactctgagtaacatggagctgattgctctgctgctgcagcaggagatggatgca
gagagacagcgggctgagtcagagctccaggccacgctgttggagaagcgtgaggctgag
ctgaagaagctaaaggtccaggtccgagatctggaagactacatcgacaagctgctggtg
cgcatcatggagcaaacacccactttgctgcaggtacgcggccggcccaaatga
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