Pangasianodon hypophthalmus (striped catfish): 113529339
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Entry
113529339 CDS
T05759
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03420
Nucleotide excision repair
phyp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113529339 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
113529339 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113529339 (cul4b)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113529339 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113529339 (cul4b)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
113529339 (cul4b)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
113529339 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
113529339 (cul4b)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113529339 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
113529339
NCBI-ProteinID:
XP_026774273
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MFPTGLPSPNPPAPSQEARAAASDVNSDSSLTPCRKRKIHSSDREDTDSVSASPKSPKAA
CNSSASCSSSSSSSSQHIQKKLRFEERSECTGLDVKMAEESPTASCSKAKSAFFSGHANG
LTKSAGSATFTNSKPGAAKKLVIKNFKEKPKLPENYTRETWQKLKEAVEAIQNSTSIKYN
LEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDEFREDSLDSVLFLKKIDKCWQDH
CRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDWKVQSKTIDGILLLIER
ERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHH
VNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDENRIQELSLL
YQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDSIIDICFMK
NEKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRF
IYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSK
DIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTFYLGKH
SGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKLATGIEDS
ELRRTLQSLACGKARVLTKTPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQA
STTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDR
DYMERDKENSNQYNYVA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttaccttcccctaatcccccagcgccaagccaagaggccagagcg
gcagcttcggatgtgaacagcgacagcagtctcacgccttgcaggaagaggaagattcac
agctccgacagggaggacactgattccgtctctgcgtctcccaaatcccctaaagccgcg
tgcaattcctctgcgtcctgctcttcctcctcttcctcctcctcgcagcacatccagaag
aagttgcggttcgaggagcgctcggagtgcacagggctggatgtgaagatggcagaggag
tctcccacagcatcgtgctccaaggcgaaaagcgcgtttttctccggtcacgctaacgga
ctcaccaaatccgccggatctgcgacattcaccaacagcaaacccggagctgctaagaaa
cttgtgatcaaaaactttaaggaaaagccaaaattgccagaaaactacacacgtgagaca
tggcagaagttgaaggaagcagtggaggccatacagaatagcacgtcaataaagtacaat
ctggaggagctctatcaggctgtcgagaatttgtgctctcataagatatctgccaagctg
tataagcagctaagagtggtatgcgaagaccacatcaaggcacagatcgatgagtttcga
gaggactctctggacagtgtgcttttcttgaagaaaatagacaaatgttggcaagaccac
tgcagacagatgatcatgattaggagtatatttttgtttttggaccgcacatatgtttta
caaaattcaatgctgccatcaatttgggacatgggactggagttgtttcgtttctacatc
atcagtgattggaaagtacagagcaaaacaattgatgggatcctgctcctcatagagaga
gaacgcaacggggaggctatagaccgctctctcctgaggagtctgctgagcatgctctct
gacctacagatttatcaagattcatttgaacaacgctttctggaggagacaaatcggctg
tatgctgcagaaggtcagaggctgatgcaagaaagagaggtgcctgagtatctccatcat
gtaaacaaacgcttggaggaggaagcagacagggtcatcacatacttggaccagagcaca
caaaaacccctcattgccactgtggagaaacaattacttggtgaacatctgaccgcaaca
cttcagaaagggttgaatcatctgctggatgagaaccgtatccaggaattgtctttgctg
tatcagctgttcagtcgagttcgaggtggggtgcaggtccttctgcagcactggattgag
tatatcaaggcctttggtagcacaatagttatcaatcctgagaaagacaagacaatggtg
caggagctgctggacttcaaggataaagtggattccatcattgatatatgcttcatgaag
aatgaaaaatttgtaaatgccatgaaggaagcttttgagaccttcatcaacaagcggccg
aacaaacctgcagagctcatagcaaaatatgtggattcaaaactgcgggcaggaaataag
gaagccacagatgaagaactcgagaagatgctggacaagattatgatcatattcaggttt
atttatggcaaagatgtgtttgaggccttctacaaaaaagacctggcaaagaggttgctg
gtcggaaaaagtgcctccgttgatgctgagaagtcaatgctctcaaaactgaaacatgaa
tgtggagcagcttttaccagtaaattggaaggaatgttcaaggacatggagctctcaaaa
gatatcatggtgcaattcaaacagtacatgcaatgccaaaatatcccaggtaacattgag
ctgactgtgaacattctcactatgggttattggccaacgtatgtccccatggaagttcat
ctgcctccagagatggtgaggctacaagaaatctttaagaccttttatcttgggaagcac
agcggaagaaaactacagtggcaatcgacattaggacattgtgtattaaaagctgaattc
aaagaggggaagaaagagcttcaagtgtcactgtttcagacattagttctgctgatgttt
aatgaaggagaagaattttcactggaagagatcaaactggccacaggaatagaggacagt
gagctgaggcggactctccagtccctggcttgtggcaaggcaagagttctcaccaaaacc
cccaaaagcaaagatgtggaagatggagacaagttttcttgcaatgacgatttcaagcac
aagctcttcaggattaagatcaaccagatccagatgaaagaaacggtggaggagcaagct
agcactacagaacgagttttccaggaccggcaataccagatagatgccgccattgtccgc
attatgaagatgaggaagactttgagccataacctcctagtgtctgaggtttacaaccaa
ctaaaattccctgtaaagcctgctgatttaaagaagaggatagagtcgctcattgatagg
gactacatggaaagagacaaggagaactccaatcagtacaactatgtggcttag
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integrated database retrieval system
