Pangasianodon hypophthalmus (striped catfish): 113529463
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Entry
113529463 CDS
T05759
Symbol
lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113529463 (lrrc4c)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
Ig_6
Sp38
Calcyon
DUF6821
Syndecan
RIFIN
Motif
Other DBs
NCBI-GeneID:
113529463
NCBI-ProteinID:
XP_026774456
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MLNKMTFFLQQQTMRGPRWNRAFSDPLFILLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLTPLVRLDELEMSGNQLSIIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCDCDILWLSWWLKEVVPANTSCCARCSTPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSVSYFTTVTVETTEPSTDEGHTIVPQKVGPT
PSSGVWETSSAPSSTTTTTTRTQVSTKATEKTYTIPVTALGDGSLNTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCMTAGPTMEGHLTLPPL
EHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttcttcctacagcagcagacgatgagaggtcctaggtggaac
cgggccttttccgacccattgtttatactgttgttggccttgcagttgctagtcgtcgct
ggcttggtgagagcccagacttgtccatccgtctgctcttgcagtaatcagttcagtaag
gtcatctgtacacgtcgtggcctgcgagatgtaccagacggtatctcgacaaacaccagg
tacctaaacctacaagaaaatttaatccaggtgatcaaggtagacagcttcaagcaccta
cggcacctggaaatcctgcagctcagcaagaaccatatccgtagcatcgagattggagcc
tttaatggattggccagcttaaacacactggaactctttgataataggttaactactata
cctaatggagcatttgagtatctgtcaaagttaaaggagttatggctgcgtaataatcct
attgagagcataccatcttatgccttcaaccgggtgccctcactgagaaggctggatttg
ggtgagctgaaaaggctctcatatatttcagaaggtgctttcgaaggcctaagtaacctg
cgttacctgaaccttggcatgtgtaatctaaaggagatacctaatctcacacctctggta
cgtttagatgagctggagatgtcaggaaatcagctctcaattatacgaccaggttctttc
aaaggccttgtccacttgcagaaactgtggatgatgcatgctcagatccagacaattgaa
aggaatgcctttgacgatcttcagtcacttgtggaactgaatttggctcataataacctt
accttgctccctcatgacctcttcacaccgctgcaccatttagagagagtgcacttgcac
cacaacccatggaattgtgactgtgacattctctggcttagctggtggctaaaggaagtg
gttccagccaacaccagctgttgtgctcgctgcagtactcctgctagccacaagggacgg
tacattggtgagttggatcaaaactatttccactgttatgcacctgtcattgtggagcca
cctgctgatttgaacgtgacagagggcatggcagcagaactaaaatgccgggcaagttca
ctgacatcagtcagttggattacccccaatgggtctatcatgacacatggagcatacaag
gtgcgcatttctgtgttgaatgatgggacattaaactttacaaatgtcacaatgcaggac
acagggacgtatacatgtatggttagcaactcggcaggcaacaccactgcctctgctacg
ctaaatgtatcctcaacagagaacagcagtgtcagctactttaccacagtgaccgtagag
acaactgaaccatcaactgatgaagggcacaccatagtaccccagaaagtgggtccaact
ccttcttctggagtgtgggagacatcttctgcaccttcatcaaccacaaccacaacaacc
cgaactcaagtctccaccaaggccactgaaaaaacatacaccatcccagtcacagcactg
ggagatggctccctcaacaccctagatgaggtgatgaagaccactaagattatcattggc
tgttttgtggccatcacactaatggctgcagttatgctgatcatcttctacaaaatgcgc
aaacagcatcaccagcagaatcaccatgcaccaacacgaaccattgagatcatcaatgtg
gatgaggactgcatgactgctggaccaaccatggagggtcatctgactctgccacctctt
gagcatgagcatcttaaccactacaatacttacaagacagcatacaatcatgcatccacc
atcaactctatacacagctctgcacacgaacctttgcttattcgggccagctcaaaagac
aatgtacaagaaacccagatctga
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