Pangasianodon hypophthalmus (striped catfish): 113529471
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Entry
113529471 CDS
T05759
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113529471 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113529471 (nhej1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113529471 (nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
113529471
NCBI-ProteinID:
XP_026774479
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MESTRHSEGALLALPWVPVNFGGSKLLAKAWFGDTEYRLLLSDLNSVWEEEMSTNSIERR
AQVLNKRLRAPVHTFFAHLRSVAWPCLSRESYEQSTTVHFLLKHKGEDLTVRLKSELGDV
PFYWEFQCTPASVAVVSRELVCPLLSMTQVLHRHVGELTTLLLKKDAEIQDYKENGAVLS
RGRLQTEPFEEETYRRNFNQSLPKMLHDGLEFDSELQDLYVSICAARNTQKRKRSSEYSS
ASVDSFVPDQDQTSCAPTGMRPASPESNQNYTRQQVEDTQYADTKKTVRLLPASAAAAAP
PVVTPADRSVNPKKKKAAGLFQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggagagtacaagacactctgagggagctttgttggctttgccatgggtgcctgtgaat
tttgggggttccaagttgttggccaaagcctggtttggtgacacagaatatcgattgttg
ctgagtgacctgaacagtgtttgggaggaggagatgagcacaaacagcatcgagagacgt
gcacaggttctaaataagcgtctaagggctccagtgcacacattttttgctcacctgcgc
tcagtggcctggccatgtctctccagagagtcgtatgaacagagcacaaccgtacatttc
cttctcaagcataagggggaagacctaactgtcagactcaagagtgagctgggagatgta
ccattctattgggaattccagtgcacccctgcctcggtagcagtggtgtccagagagcta
gtgtgtcccttgttgtctatgactcaagtgctgcataggcatgttggagaactaactact
ttgctgctcaagaaagatgctgagatacaagactacaaagagaatggagctgtgcttagc
agaggtaggcttcagactgagccatttgaggaggagacatacagaaggaacttcaaccag
agccttcccaagatgttgcatgacggtctggagtttgactctgagctgcaggacctatat
gtgtccatatgtgctgcaagaaacacccagaaacgcaagcgttctagtgaatacagctct
gcttcagtagacagctttgtccctgaccaggaccagaccagctgtgcaccaacaggcatg
aggcctgcctctcctgagtctaatcaaaattatacaaggcagcaagtagaagacacacag
tatgctgacaccaaaaagactgtgagactcttacctgcttctgctgctgctgctgctcct
cctgtagttacacctgcagacaggtcagtgaaccccaagaagaagaaagcagcagggctc
tttcagtga
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integrated database retrieval system
