Pangasianodon hypophthalmus (striped catfish): 113529478
Help
Entry
113529478 CDS
T05759
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113529478 (caprin2)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
113529478 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
XFP_C
Motif
Other DBs
NCBI-GeneID:
113529478
NCBI-ProteinID:
XP_026774489
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MRETRTMVQLFPSQASDTMALSESMEERDAGLDGSPSTDSPHAFTALQLALNPSATVYHG
YENYIEDGLICLRHKIRNIEKKKLKLEGYQMRLKNGDTLNQDQMDAVGRYEEVIHNLKFA
RELQKTLCDLTQDLLKAQRKAMRREQVQRAETEQRRLSMMLQVQYVLCSLQRQDIRKTFN
TREHARYLSAQEMEKLLNLASLLACKRDASMSLEDQMEQASFVYLDLLDGKDKPVAGSTY
KYLKEKLLRLVDSGLFDHIPEPEKATKKDNDDQKPDASSTSSSLPAVVSLNSEVASRQFL
NRRYVTERDLPGPGQGEEVNVQAPNWKAEFLALKEQEPPDSWDIEFSDPPASSKMGLQKP
WKGAAGFIPKTTVTMKAAVETKQKRQRKNKGSPASKSDGEGKKAVPVEVFNSPSSLAKDP
ALRRQQLDHLMDQITGSFSFIQDSLLDGEAVPGNGRTRELHLSPGSSPLAQRDQKKIPDI
LPPSQNSTPLHGHQGSGDAQSTLSNGDEITNTSDLKLHTEDGPHAKQDKGFTSPPLYCRE
SCISVPHDNKNSKQAGKQPLSNGEVPPTVLAQTFSTPPSRRSLPATSTASFNSLHSVFSG
EVPMTRSSELKTDESGFLGSVCLSYSTASTLSHSTASTQTPPELSLPQDDLQMESAYLSE
SDISATSQVYSSPGPNSAPQSSLVQHYYPRSSLRGMTHGARGLSHSSLRSSGASRGGYEV
HRVNVRAPGGGFSAQTHREPGSVLYTSQENGYQQSHKRTGGTAARRNSSVAGWSDSSQVS
SPDREGTYIIDSAHGDSLTITASGMPITGPPPHTLMPVYPQLRVAFSAARATNLAPGTLD
QPIAFDLLHSNLGGAFDAPSGHFACPAPGTYVFFFHILKLAISVPLYINLMRNDEVVASA
YANDGAPDHETASNHAVLPLRIGDHIWLRLHRGAIYGSSWKYSTFSGFLLYPD
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagagagacacggaccatggttcagctgttcccgtctcaagcctcggacaccatggcg
ctctcggagtcgatggaagaaagggatgccgggctggatggcagcccaagcactgactct
cctcacgctttcacagccctacagctcgccctgaacccctcagccaccgtctaccacggg
tacgagaactacatcgaggacggcctcatctgcctcaggcacaagatccgcaacattgag
aaaaagaagctcaagctggaaggctaccaaatgcggctaaagaatggggacacactgaat
caagaccaaatggatgcggtagggaggtatgaagaagtgattcacaacctgaagtttgcc
agagagttgcagaagaccctttgtgatctcactcaggatctgttgaaggcccagaggaag
gccatgcggcgcgagcaggttcagagggcagagaccgaacagaggcgtttgagtatgatg
ctgcaggtgcagtatgtcctctgcagtctccagaggcaggacatcaggaaaaccttcaac
acacgtgaacatgctcgctacctgtctgcgcaggaaatggagaagctgctgaacctggct
tcattattagcttgcaagagggatgcgagcatgagtttagaggatcagatggaacaggcc
tcttttgtttacctagatctactggatggcaaagacaaaccagttgctggctcaacatat
aaatacctcaaggagaagctgctcaggctggtggactctggattattcgatcacatccca
gagcctgaaaaagctacaaagaaggacaatgacgaccaaaaacctgatgcttcctccaca
tcaagcagcctacctgcggtggtcagtttgaactctgaagtggcttcaaggcagttttta
aacagacgctacgtaacggagagagacctccccgggcccggtcagggcgaggaggtgaac
gtgcaggcaccaaactggaaggcagagtttttagccctgaaggaacaggaaccaccagac
tcctgggatatagagttttctgatccgccagcatcctccaaaatggggttacagaagcct
tggaaaggagcagcaggattcatccccaaaaccacggtcactatgaaggctgctgtcgag
acaaaacagaaacggcagaggaaaaataaaggaagcccggcctccaaatctgatggtgag
ggtaagaaggccgtacctgtggaggtgtttaactctccgtcctctctggctaaagatcct
gccttgcgcagacaacagctggatcacctgatggatcagatcacaggctccttcagcttt
attcaggactctttgttggatggagaagccgtgcccggtaatggccgaaccagagagctg
cacctgtctcctggctcctctcctcttgctcagagggaccagaagaaaatcccggacatc
ctgcctccatctcagaattcgactcctcttcacggccaccagggttctggagacgcccaa
agcactctgtccaacggtgatgagatcacaaacacctctgacctgaagctacacactgag
gatggaccacatgcaaagcaagataagggcttcacctctccacctctctactgcagagag
tcctgcatctctgtacctcatgacaacaagaactctaaacaggcaggaaagcagccactt
tctaatggagaagtgcccccgactgttctggcacagaccttcagcactccacccagcaga
cgatctctacctgcaaccagcactgcgtccttcaacagcctgcactctgtgttcagtggg
gaggttcctatgaccaggagttcagagctgaaaactgatgaaagtggctttttaggatct
gtgtgtctgagctacagtacagcaagcacactgagccactccactgctagcacacagacc
ccacctgagctcagcctgccgcaagatgacctgcagatggagagtgcatacctgtcagaa
agtgatatcagtgctaccagtcaggtttattcatctcctggtccgaattctgcccctcag
tctagtctggtccagcattattacccccgcagttcactcagaggtatgacacacggtgca
agaggactctctcactcctcactccgctcttctggggcttccagaggtggctatgaggtg
cacagagtaaatgtacgagctccaggaggaggcttcagtgcccagacccaccgtgagcct
ggctctgttctgtatacctcccaggaaaacgggtatcagcagagtcataaacgtactgga
gggacagcagctcggaggaacagctcagttgcaggttggagtgactcctcccaagtgagc
agcccggaccgggagggcacgtatataatagactcagctcatggtgactctctcacaatc
acggcctctgggatgcccatcactggccctcctcctcacaccctgatgcctgtgtaccca
caacttcgtgtggccttttcagctgcccgtgccacgaacttggctccaggcactctggac
cagcccattgccttcgaccttctccacagcaacctaggtggtgcgtttgatgcgccctct
ggccactttgcctgcccggcaccaggcacatatgtcttctttttccacatccttaagctg
gccatcagtgtgccactttacatcaatctgatgcgcaacgatgaggtagtggcttcagca
tacgccaacgatggtgcccctgaccacgagacggccagcaaccatgccgtgctgcctctg
cgcattggcgatcacatctggctgcgtctccatcgcggcgccatctacggcagtagctgg
aagtacagcaccttctcaggcttcctgctctacccggattga
DBGET
integrated database retrieval system
