KEGG   Pangasianodon hypophthalmus (striped catfish): 113529482
Entry
113529482         CDS       T05759                                 
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04620  Toll-like receptor signaling pathway
phyp04621  NOD-like receptor signaling pathway
phyp04622  RIG-I-like receptor signaling pathway
phyp04623  Cytosolic DNA-sensing pathway
phyp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    113529482 (irf7)
   04621 NOD-like receptor signaling pathway
    113529482 (irf7)
   04622 RIG-I-like receptor signaling pathway
    113529482 (irf7)
   04623 Cytosolic DNA-sensing pathway
    113529482 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113529482 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phyp03000]
    113529482 (irf7)
Transcription factors [BR:phyp03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    113529482 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF DUF4194
Other DBs
NCBI-GeneID: 113529482
NCBI-ProteinID: XP_026774500
LinkDB
Position
Unknown
AA seq 452 aa
MPLGEQNAKTRLCFDKASAHPLAESDMSIINSAVRPQFGHWLLEQVQSGRYDGLYMIDRD
TFRIPWKHNSRKDCGDEDNKIFRAWAVVSGKINEYPNDKAKWKTNFRCALNSLTQFKMIH
DNSKDSENPHKIYRIIRPENHQQCSSIHIEALYSSTNNQCEEMEYDLPNHMDTLHLNQQP
TEIQYWPDYQQPIQDLADHANLCIPQMPIVQQHCLPNNLPVSAPPLAQVPYNTVHQPFIL
PSINELEISIHYRKMEMLKVQCEGPRIQLHSQCDESELRGMSVPFPSTEALTDHKQVQYT
KRLLDNIKRGLILEVCSAGIYGFRQDKCNVFVSTCDPAEIQNPEPRKLPQNQNELLFSFD
KYKKDLMDFKENRRGSPEYTIYLCFGEKFPDGKPLDRKLIVVKVVPLICRELHKAAQLEG
ASSLQNDNISLQFSHNSLYELIEATFSPPPAV
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgccgctcggcgaacaaaacgcgaaaacacgactctgttttgacaaagcgtctgctcac
cccctggccgagagcgacatgtcgataataaacagcgcggtgcgaccgcagttcggacac
tggctcctagagcaggtgcagtccggacggtacgatggactttacatgatcgacagagac
acattccgcatcccgtggaagcacaactcgaggaaagactgcggagacgaggataacaaa
atattccgagcatgggctgtggttagtggtaagatcaatgagtatcccaatgacaaggca
aagtggaagaccaacttccgctgtgccctcaacagccttacacagttcaagatgatccat
gacaactccaaggactcagagaatccccataaaatctaccgcatcatccgtcctgaaaac
catcagcagtgctcgagcattcacattgaagccttgtacagctccacaaacaatcaatgt
gaagaaatggagtatgatttgccaaaccacatggacaccttgcatctaaatcaacagccc
acagaaatacaatattggccagactatcaacaacctatccaagacctagcagatcacgcc
aacctctgtatcccccaaatgccaattgtgcagcagcattgccttccgaataacctgcct
gtttcagcaccacctttagcacaggtaccctacaatacagtgcaccagcctttcatcctg
ccttctatcaacgagctggagatctccattcactacaggaaaatggagatgctgaaggtg
cagtgcgaaggtccacgcattcagctccactcacagtgtgatgagtcagagctgaggggc
atgtccgtgcccttccccagcaccgaggcgctcactgaccacaaacaggtccagtacacc
aagcgcctcctggacaacatcaaaaggggtctgatcctggaggtctgctccgcaggcatc
tacggcttccgccaggacaagtgcaacgtgttcgtcagcacgtgcgatcctgccgagatc
cagaacccagagcccagaaagctgccccagaaccagaatgaactgctgttcagcttcgac
aagtacaagaaagatcttatggacttcaaagagaacagacgtggatctcctgagtacacc
atctatttgtgcttcggggagaagttcccagatggaaagccactggacagaaagctgatt
gttgtgaaggttgtgcctctgatttgtcgtgagttgcataaggcagcacagctggaagga
gcgtcatctctgcaaaatgacaacatcagcctgcagttctcccacaatagcttgtatgaa
ctgattgaagccactttctcaccacctccagctgtataa

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