Pangasianodon hypophthalmus (striped catfish): 113529494
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Entry
113529494 CDS
T05759
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113529494 (hps3)
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
113529494 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
113529494
NCBI-ProteinID:
XP_026774521
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MVHVYNCHPFACQRIVPAAQEPALVCCGGRALFVVSAGGCKVEAYDMQQEECPLICRFST
MGIVHSIVYSQIGDYLVTIEEKNGATYLRAYTNWRYQAAEKKRVGVRLLGHLMRGPVFQG
TPKEQMEIVEIPLSETPLCAACCSVTGELLVACAKSLVLFGLKRQSLSDQLDALDFERLL
ILYVSGWSPLQVALCDGYVALQTELEVLVVKLENLDKSCASNEEHTQLTCDDMSAAGDTD
NDVKKEPQSPLESDDFFVFPKHMEMLGDKAKDCGVSLSLEWTGMETEARDNMGVTYILYR
RFAPDFFQGCSVEETRLHSLQLHPMYTGNPDVSSDAEKSAPACMFCFFSLPNAGYMYSLK
STVELISTYQYPEKAHQALLCNQFLYVITRNALQCFSVRCSAVAARVEDPYIDTTMKACP
PFTMEVSALRIQLFIGLKTLCHDGNHLVLLTAVDVETERTTRRSVKSKEQKSLAGIFLAV
GIDPTASPALESFLSRSFLPRKTSVSKQKEPSETGHGWNLYVISTVSTLQLYREMVEYSK
RYEQTSPLSQNCVHLLSEAHLLLRASLLCPTSDRAKIQEAFLESCAQLGDCFSRLDKRDC
HLALPYYKMSGLSVTEVIQRNMAIYRGPVPDYGKGFLFFLKHSLYEETMEELSEETANTV
LEIFSKAEPGQLPYVVSSSFMKNADPACARAHLEQLELSGAPSVTVTLCKAAQALRLGDL
HYYQQQMDRHAEMLQVYGFIEEPKLLVHRRGKAMVPTQLARHLRDTQDGLLVAAVVALHE
NSKVKLEEAELFFQELCKDSTEPQSIPQLLVDFWEALLVASSQELIIQELLFHLTSVYLE
RIMCKERSGIKALKTAEDLINSCSHYGPLFPWLSILTPAQFNITHDHQEDLQKLQSLLCG
PTLDVSSIVPLLEQLPDTNNTGLSVHVLCATKLGQHEKAIENLLDRCPQAIISYANHELH
SNKMALWWQKLFPELCERTRLSSGDNGVLINALKETVAVVAVELNPVEFLDLLPDDGTAH
FFLPHLLKCSQRHLLA
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtgtacaactgccacccgttcgcgtgtcagcgcatcgtgccggcggcgcag
gagcccgcgctggtgtgctgcggcgggcgcgcgctcttcgtcgtctccgctggaggatgt
aaggtcgaggcgtatgacatgcagcaggaggaatgtcctctcatctgccgcttttccacc
atgggcatagtgcacagtattgtgtacagtcagatcggcgattacctggtcaccattgag
gagaagaacggtgccacctacctgagggcctacaccaactggcgctaccaagctgctgag
aagaagcgtgtaggcgttcgcttgctcgggcacctcatgcgcggtccggtcttccaaggc
acccccaaggaacagatggagatcgtagaaataccactgtctgaaacaccactctgcgct
gcctgctgctccgtaacaggtgaactgctggtggcctgtgcaaagagcctggtgctgttt
ggtctgaagcggcagtcgcttagtgatcaactggacgcccttgactttgagaggctcctt
atcctgtacgtttctggttggagcccattgcaggtggcactctgtgatgggtacgtggcc
ttgcagacagagctggaggtgttggtggtgaagctggagaacctggacaagagctgtgca
tccaatgaagagcatacgcagctgacgtgtgatgatatgtctgcagctggtgatactgac
aatgatgttaaaaaggaaccacaaagccccctcgagtctgatgacttctttgtgttcccg
aagcatatggagatgctgggagataaggcaaaggattgtggggtgtctttgtctttagag
tggactgggatggagacagaggcaagagacaacatgggagttacctacatcttgtacagg
aggtttgccccagatttcttccagggctgcagtgtggaggagacacgcttacactccctg
cagctccaccccatgtacactggtaatccggatgtaagcagtgacgctgaaaagagtgct
cctgcctgtatgttctgttttttttctctgccaaatgctggttacatgtacagcctgaag
agcacagtagagctcatatccacctaccagtacccagaaaaggcccatcaggctttgctg
tgcaaccagtttctatatgtcatcacacgaaatgctctgcagtgtttctctgtgagatgc
agtgccgtggctgctcgagtcgaggacccctacatcgacaccaccatgaaggcctgtcct
cctttcactatggaagtttccgccctccgtattcagctgttcatcggcctgaagactctg
tgtcatgacgggaatcaccttgtgctcctcacagctgttgacgttgagaccgagcgaacg
actagaagatctgtcaaatcaaaagagcagaaatcactggcagggattttcctagcggta
ggtatagatccgaccgccagcccagctctggagagcttcctgtccaggtccttcctaccc
aggaagacctcagtatcgaagcaaaaggagcccagcgagactggccatggctggaacctg
tacgtgataagcaccgtgtccacactgcagctctacagagagatggtggagtacagtaaa
cgatatgagcagaccagcccgctgtcccagaactgtgttcatctgctgagtgaagctcac
ctgctgctcagagccagtctgctctgtccgacctcagacagagccaagatccaggaagcc
ttcctggagagctgtgcccagctgggagactgcttcagcaggctggataagcgggattgt
cacttggctcttccgtactacaagatgtctggcctgtcggtgacagaggtaatccagaga
aacatggccatatacagaggtcctgttccagattatgggaaaggcttcctcttcttcctt
aagcactctctctatgaagaaaccatggaagagctcagcgaagaaactgctaacaccgtg
ttggagatcttcagtaaggctgagccaggccagctcccatatgtagtgagcagctcattc
atgaagaacgccgatcctgcctgtgcacgtgcacacctggagcagctggagctcagtggc
gccccatctgtcacagtcacgctgtgtaaggctgctcaggcactgcgcttaggagacctg
cactactaccaacagcagatggatcgacatgctgagatgctgcaggtgtacggcttcata
gaggagcccaagcttcttgtgcatcgcagagggaaggccatggtgcccactcagctggca
cggcacctgcgggacacccaggacggactgctggtggcagccgttgtggcacttcatgag
aacagcaaggtcaaactggaggaggcggaactcttctttcaggagttgtgtaaggacagc
acagagcctcagagcattcctcagctgctggtggatttctgggaggctctgctggtggca
tcatctcaggaattgatcatccaggagcttttgttccacctcacctctgtatacctcgag
cgcatcatgtgcaaagagcgctcaggcattaaagcactcaaaacagctgaggacttgatt
aactcctgctctcactatggaccactgttcccgtggttgagcatcctgactcctgctcaa
ttcaacatcacacatgaccaccaagaagaccttcagaaactccagtctctgctgtgtggc
ccaacactggacgtgtcctccattgtacctctgctagaacagctacctgacacgaataac
accggccttagcgtgcacgtgctctgtgccaccaaactgggtcagcatgagaaagccatc
gagaatctactggaccgatgccctcaagccatcatctcctacgccaaccacgagttacat
agcaacaaaatggctttgtggtggcagaaactgtttcctgagctttgtgagaggacacgg
ctttcttcaggagataacggtgttctaatcaacgctctcaaagagactgtggcagtggtg
gccgtggagctgaacccagtagagtttttggacttgttaccagacgatggtactgcacac
ttcttcctgcctcatcttctgaaatgcagccaaaggcatctcctagcatga
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integrated database retrieval system
