Pangasianodon hypophthalmus (striped catfish): 113529664
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Entry
113529664 CDS
T05759
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113529664 (scfd1)
Membrane trafficking [BR:
phyp04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
113529664 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
113529664 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Peptidase_S66
DUF3882
Motif
Other DBs
NCBI-GeneID:
113529664
NCBI-ProteinID:
XP_026774825
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MAASIREKQTAALKRMLNFNAPPLKNTAVEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALAANAVNQVTKVFDQYLNFITLEDDMFVLCNQNKEQISYHAINKPDIMDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDTMGTGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSLEESTGSEVSPAGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTPEDKMRLFLIYYITSQQPPSEGDLEQYKRALTDAGCDLSPL
NYIKQWKAFTKMATAPASYGNSGVKPMGLRHKAHQNLPVTRILDNLMDMKSNPETDDYRY
FDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDYTRAKQGKKVMYGCSELFS
AAQFLKQLSQLGQK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatccgggaaaaacagacagctgccttgaagcgaatgctaaactttaat
gcaccacctctaaaaaacacagcagttgaaccagtatggaaggtacttatttatgatcgc
tttggtcaagacatcatctctccccttctctctgtgaaagagttaagagacatgggaatc
actctccacctattattacactcagacagagatcctattccagatgttcctgccatttac
tttgtgatgcccacagaggagaacatagacaggatatgtcaagacctgcggaaccaactc
tatgagtcgtactacctgaactttatctctgcgatttccagaagcaaactagaagacata
gcaagtgcagctcttgcagcaaatgctgtgaatcaggtgaccaaagtgttcgatcagtat
ttgaacttcataacactagaagatgacatgtttgtcctctgcaatcagaataaagaacag
atctcctatcacgcaatcaacaaaccagatattatggacactgatatggaggctataatg
gacaccattgttgacagtctcttctgcttctttgtcactcttggtgctgttccaataatc
agatgtccaagaggaaacgcagctgaaatggtagctgtgaaacttgacaagaaactgaga
gagaatttgcgagatgctcgtaacagcctgtttactggtgacaccatgggcacaggccag
tttagtttccagaggccgttatttgttcttgccgaccgcaacctggatcttgccacccca
ctccatcatacatggacctaccaagctctcattcatgacgtcttggacttccatctgaac
agggtcagtctggaggaatctacaggatcagaagttagcccagcaggggcacggcccaaa
aaaaagaacaaaaagagctatgatctcactgctgcagacaagttttggcagaagcacaaa
ggaagcccattccctgaggtcgcagaatcagtgcaggaggagttggatacgtacagagcc
caggaggatgaggttaagcgtctaaagagcatcatgggcttagaaggggaagatgaggga
gccattagcatgttgtcagacaacactgccaaacttacatcagccgtcagttctcttcct
gaacttttagagaaaaagagactgattgacctccacaccaatgttgctacagcagttttg
gaccacattaagtctcgcaagctggatgtatactttgagtatgaggagaagctaatgagc
aagtccacactggataaatccctgctggacattatcagtgaccctgatgctggaacacca
gaggataagatgagacttttcctgatctactatatcacctcccagcagcctccatctgag
ggtgatcttgagcaatataaaagggctttgactgatgctggctgtgacctctcccccttg
aactacataaagcagtggaaagctttcacaaagatggctactgcaccagccagttatggt
aacagtggagtgaaaccaatgggcctgagacacaaagcgcatcagaatttgccagttact
cgaatcttggacaacctgatggacatgaagtcaaatccggaaacagatgactacagatac
tttgacccaaaaatgctgcgcggcagtgaaagttccattccaaggaacaagaacccattt
caagaggccattgtttttgtcgttggtgggggtaactacatagaatatcaaaatctcgtc
gactacacaagggccaagcaggggaaaaaggtgatgtatggctgcagtgagctgttcagt
gcagcacaattcctgaaacagctctctcaactggggcagaagtag
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