Pangasianodon hypophthalmus (striped catfish): 113529786
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Entry
113529786 CDS
T05759
Symbol
gabrb2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113529786 (gabrb2)
04082 Neuroactive ligand signaling
113529786 (gabrb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113529786 (gabrb2)
Ion channels [BR:
phyp04040
]
Ligand-gated channels
GABA-A
113529786 (gabrb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
113529786
NCBI-ProteinID:
XP_026775044
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MRGARCLPSAWSTRRKKIIKTVAMERMRKSQCIFLLCPFIMTAVCAQSRDSSNMPVVKDT
VDRLMKGYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYS
EIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA
CMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSIVDYKLIS
KNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGI
TTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQK
KAAEKAATANNEKLRPDPNKWMVGNVVQRDDALYARMKQREIDVYDSMWDPIFADDAALG
LGEQRLKMNPDDIRLTTVEMKNEMGPGDLSRGLGDPRGAMLAYDSSTLQYRRAALARHNY
GTGALEKKKSRLRRRASQLKVNIPDLSDVNSIDKWSRMVFPTVFSFFNVVYWLYYVH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgcgcgctgtcttccttcagcttggtccacaagaagaaaaaaaatcatcaaa
actgttgcaatggagaggatgaggaaatcgcagtgcatcttcttgctgtgtcccttcatc
atgactgctgtgtgcgcgcaaagcagagactctagcaatatgcctgtagtgaaagacaca
gtggacagactgatgaagggatacgatatccgactgaggccggattttggaggggctccg
gtggcggttggcatgaatatagacattgccagcatagacatggtgtccgaagtaaacatg
gactacaccctgaccatgtatttccagcaggcatggcgggacaagcgtctctcgtactca
gagatcccactgaacctgacgctggacaaccgcgtggccgatcagctgtgggtgcctgac
acttacttcctcaatgacaagaagtccttcgtgcatggcgtcacggtgaagaaccgcatg
attcgcctgcatcctgatggcaccgtgctgtatggattgaggatcaccaccacagcagca
tgtatgatggacctgagacgctacccgctggatgagcagaactgcacactggagattgag
agctatggatacaccacagatgatattgagttttactggagaggaggagatggagctgtg
tctggagtggagcgcattgagctgccccagttctccatcgtggactacaagctcatctcg
aagaatgtagtgttctccacaggttcatacccacgtctatcgctgagcttcaagctgaag
aggaacattggctactttatcctgcagacctacatgccatccatcctgatcaccattctg
tcttgggtctcattctggatcaactacgatgcctctgctgcccgtgtagccctaggtatc
accacggtgctgaccatgaccaccattaacacccatctgagagagactcttcccaagatc
ccctatgtgaaagctatagatatgtacctgatgggctgcttcgtctttgtgttcctggcc
ctgctcgagtacgccttcgtcaactacatcttctttggtcaaggcccccagaggcagaag
aaggcagctgagaaagcagccaccgccaacaacgagaaactccgacctgatccgaacaag
tggatggtgggaaatgtagttcagagagacgatgctctgtatgccagaatgaaacagagg
gaaattgacgtgtatgactcgatgtgggatccaatctttgccgacgatgctgcattagga
ctaggcgagcagagacttaagatgaatccggatgatatccggctgaccacagtggagatg
aagaatgagatgggtcctggcgatctctcccgtggtctgggcgacccgcgaggtgccatg
ctggcgtatgacagctccacgctgcagtatcgacgggcagcactggcacgccacaactac
ggcaccggtgctctggagaagaagaagagccgtctacgccgacgtgcttcgcagctcaag
gtcaacatccctgacctgtctgacgtcaactccatcgacaagtggtccaggatggtcttc
ccaaccgtcttctcattctttaatgtggtctactggctctactatgtccattaa
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