KEGG   Pangasianodon hypophthalmus (striped catfish): 113529788
Entry
113529788         CDS       T05759                                 
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
  KO
K05636  laminin, beta 1
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510  Focal adhesion
phyp04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113529788 (lamb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113529788 (lamb1)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 Alanine_zipper F5_F8_type_C DUF6415
Other DBs
NCBI-GeneID: 113529788
NCBI-ProteinID: XP_026775048
LinkDB
Position
Unknown
AA seq 1782 aa
MIFQLAALLCLGARSLAELPERGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLEKAEPF
CIVSHLQEEKKCFVCDSRESYNDAAHTTSHSIENVVTTFAPNRLKTWWQSENGMENVTIQ
LNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAYDCESSFPLISRGPMKK
VDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTLG
DNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPIDGAGEVVDGMVHGHCMCNHNT
MGLNCELCQDFYHDLPWRPAEGRNTNACKKCNCNHHSTLCHFDMAVYQASGNVSGGVCDD
CQHNTMGHHCEQCKPFFYQHPERDIRDPNICEACDCDPIGSLNGGICDGLTDVSLGLIAG
QCRCKPNVEGERCDQCKQGHYGLSDDPLGCKACTCNPVGTIPGGSPCDTSSGNCYCKRLV
TGRDCDQCLPQHWGLSNDMDGCRPCDCDAGGALNNDCSPETGFCQCREHMSGRRCDQVES
GFYFIALDHYVYEAEDAKFGPGVTVVQRPYPQDRNPTWTGIGFVNVPEGAYLEFSIDNIP
FSMEYDILIRYEPQLPEQWEEVLMTVIRPHGITADSRCANTMPDDDNQMVSLHPGSRYVV
LPRPVCFEEGLNYTVRLSLPRYSTSSDVQSPYTLIDSLVLMPHCKNLDIFSGSGSEGGDL
ETNSAWDTFQRYRCLENSQSVVKTPMPDICKNYIFSVSALLHQGAKACACDPQGSLSTVC
DPNGGQCQCRPNVVGRNCDRCAPSTFLFGPQGCRPCECNPQGSVHAFCHEATGQCECIPG
AYGRQCDRCLPGHWGFPTCRPCTCNGHAEQCDPQTGQCLDCRDHTTGHSCERCLHGYYGD
PVLGSGDHCRPCMCPDGPGSSRQFAGACYKSHDSNQVYCLCNQGYKGARCDECAPGYYGN
PHEAGGECRPCQCSNNIDMMDPGSCDVHTGVCLKCLYHTEGETCSHCKLGYYGDALTQNC
RRCVCNHMGTRQDTCPSAGECHCDQNNGQCQCLPNVVGQNCDFCAPDTWNMASGQGCEAC
DCDPNHSSSSACNEISGQCMCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQC
NKASGHCVCVEGVSGPRCDTCARGYFGEFPHCERCHQCFAEWDVIIGDLTNQTHRLVQKV
NAIKSNGISGPYQDTINNVEKSANSIRELLAQNPATQPLTEIQSLVEQATSMMAEMNEKL
NQTEELLSQISDNSTDSKLETLSEEAQKLQRTVKDLQDQVEFIKNSDVRGALDSMRKYMQ
ESEAAEARVNASISDPESLVEQSASLRNYTESMMNETKEEFQKKQDEHTKALDNLAGQLE
TLDLSELSEKTCGSRAGSEACADSPCGGLGCVDAEGNRKCGGEGCNGLTTLAHNAWQKAK
NFDQDIVSAMEEVDKLSKMVSEAKVKADEAKLNAQEVLQKTNRTKQRVDDSNEELRRLIR
QIRDFLTQEGADLESIEAVANEVLQMQMPTTPDQLQNLTADIRERVASLSDVADILNESA
ADIERAEALLEQARKARKEASDVKSTAELVQEALDQAEKAQTAVTEALKQATSDIKGTQD
LLVSVESETADSEFKLSNATQRLLQLEKDVALLKEKALNTSTSAEMTERDTDSVSELAEQ
IKKDLDTELKDKYGTVEELITQKAQGVADAKKRAEMLQQEAKELLLQASDKLQLLKDLEK
SYDENQKTLEDKANQLMDLEKAVKELLQEISQKATLYSTCLF
NT seq 5349 nt   +upstreamnt  +downstreamnt
atgatattccaactcgcagcccttttgtgtttaggggcgcggtcgttggccgagctgcct
gagcgtggggatgtgtgcacggagggaagctgctaccctgccactggagacctgcttatt
ggcagagcccatcagctctcagccacctccacctgtggcctggagaaagccgaacctttc
tgcatcgtcagtcaccttcaggaagagaagaaatgctttgtgtgcgattctagggagtcc
tacaatgacgccgcacatacaaccagccacagtatcgaaaatgtggtgaccacatttgct
cctaaccgacttaagacttggtggcagtcagaaaatggcatggagaatgtgaccatccaa
ctgaacctggaagcagagttccacttcacccatctcatcatgaccttcaagaccttccgg
ccagctgccatggtgatcgagcgctcagctgactttggaaagacatggcaggtgtaccgt
tactttgcctatgactgcgagtcctcctttcccttgatctctcggggccccatgaagaag
gtggatgatgtcatttgcgactctcgctattctgatattgaaccatctacagagggagag
gtcatctttcgagtattggacccagcattcaggattgatgatccttacagcccaaggatc
caaaatatgctgaagattactaacctgagagtgaagtttactaagctgcacacactgggg
gacaatctgctggactcacgtattgagatcaaggagaagtactactatgccatttatgac
atggtggtgaggggtaactgcttctgctatggccacgcttctgaatgtgctcccatcgat
ggagctggagaggtggtggatggaatggtccatggccactgtatgtgtaaccacaacacc
atggggctgaactgtgagctctgtcaggacttctaccatgacctgccctggaggcctgca
gaggggcgtaacaccaatgcctgcaaaaagtgcaactgcaatcaccacagtaccttgtgc
cactttgacatggctgtgtaccaggcctcaggtaatgttagtggaggagtgtgtgatgac
tgccagcacaacactatgggccaccattgcgagcagtgcaagcccttcttctaccagcat
cctgagagggacattcgtgaccccaacatctgcgaggcctgtgactgtgatcccattggt
tctctgaatggaggcatctgtgatgggctgacagatgtctctctcggactgatcgcggga
cagtgtcgttgtaagcctaacgtggagggggagcgttgtgaccagtgcaaacaaggccat
tatggccttagtgacgatcctctgggatgtaaagcttgcacctgtaatcctgtggggaca
atcccaggtggaagcccttgtgacacaagttcagggaactgctactgtaagcgcttagtt
acggggagagactgtgaccagtgcttgcctcagcactgggggctcagcaacgacatggac
ggctgcaggccatgcgactgtgatgctggaggtgctctcaataacgattgttctccagag
acagggttttgccagtgtcgggagcacatgtcaggcagacgctgtgaccaagtggagtcc
ggtttttacttcattgctctggaccattacgtttatgaggcagaagatgccaagtttgga
cctggtgtcacagttgtgcagagaccatatcctcaggaccgcaatccaacctggactggt
attggctttgtgaatgttccagaaggagcttatctggagttcagcattgacaacatcccg
ttttccatggaatatgacatccttattcgctatgaaccccagcttccagagcagtgggag
gaagtactgatgactgtcatcaggcctcatggcatcactgctgacagccgctgtgccaac
actatgccagatgatgacaaccaaatggtgtctctacaccctggctccagatatgtggtg
ttacccaggccagtgtgttttgaggaggggttgaactacacagtgcgtctgagtcttcct
cgctactctaccagcagtgacgtccagtccccatacacactcattgactcacttgtgttg
atgccacactgtaagaatctggatatcttctctggttccggatcagagggaggtgacttg
gagaccaacagtgcgtgggacaccttccagcgctaccgctgcttagagaacagccagtct
gtggtgaagacccctatgcctgacatctgcaagaactacatcttcagtgtgtctgctcta
ctgcatcagggagctaaagcttgtgcatgtgaccctcaggggtctcttagtacggtgtgt
gacccaaatggtggccagtgccaatgccggcccaacgtggtgggccgaaactgtgacagg
tgtgccccttctactttcctctttggacctcagggctgcagaccatgtgagtgcaatcca
cagggctcagtgcatgcattctgtcatgaggccactggtcagtgtgaatgtattcccgga
gcgtatggacgtcagtgtgatcgctgtctccctggacactggggcttcccaacctgccgg
ccatgtacttgtaatggccatgcggagcagtgtgacccccaaacggggcagtgcttagac
tgtagggaccacaccactggacacagctgtgagagatgtttgcacggttattacggtgac
cctgtcctgggatctggagaccactgccgcccctgcatgtgtccagatggccctggcagc
agccgacagtttgctggggcatgttataagagccatgactccaaccaggtgtattgttta
tgcaaccagggctataaaggtgcaaggtgtgatgagtgtgccccaggctactatggaaac
cctcatgaggctggtggagagtgtcgtccttgccagtgcagtaacaacattgacatgatg
gacccaggatcatgtgatgtgcacacaggcgtctgcctcaaatgtttgtaccacacagag
ggtgagacctgcagccactgcaagctgggttactatggtgatgcccttacacagaactgc
agacggtgtgtgtgtaaccatatgggcactaggcaggacacctgtccctctgctggcgaa
tgccattgtgaccagaacaacgggcagtgccagtgcctacccaacgtagttggacagaac
tgtgatttttgtgccccagacacttggaacatggccagtggtcagggctgcgaggcctgt
gactgcgaccccaatcactcatccagctctgcctgcaatgagataagtggccagtgtatg
tgtaagcctggatttggaggaagaacatgcagggagtgcagagagctgttttggggtaac
cctgaagtcaaatgccatgcatgtgactgtgaccccagaggaattgctgagcagcagtgt
aacaaagcctcgggacattgtgtgtgtgtggagggtgtgtcgggcccccgctgtgacact
tgtgctcggggttactttggtgaattcccacactgtgaacgctgccaccagtgcttcgct
gaatgggatgtgatcataggagacctcactaaccaaacgcacagactggtgcagaaagtt
aacgccattaaatccaatggcatctcggggccctaccaggacaccatcaacaacgtggag
aagagtgccaattccatccgtgagcttctggcccagaaccccgccactcagccgctcact
gagatccagagcctggtggagcaagctacatccatgatggctgaaatgaatgagaagctg
aatcagacagaggagctcttgtctcagatctctgacaacagcactgactcaaagctggaa
acactcagtgaagaagctcagaaactgcagcgcactgtaaaagacctgcaagaccaagtt
gagtttatcaagaattcagatgtgcgaggagcattagacagtatgaggaaatacatgcag
gagtctgaagcagcagaggctcgcgtgaatgcctccattagtgatcccgagagcctggtg
gagcagtcagcctcactgcgcaattacacagagtccatgatgaatgagactaaagaggag
tttcagaagaagcaagatgagcataccaaggcactggacaatctggctggccagcttgag
accctggacctgtctgaactcagtgagaagacttgtggcagccgtgctggctctgaggcc
tgtgctgactctccgtgtggaggtctgggctgtgtggatgctgaaggaaacaggaagtgt
gggggagagggatgtaatggtctcaccacattggcccataatgcctggcagaaagccaag
aactttgaccaggatattgtcagtgccatggaggaggtggacaaactttccaagatggtg
tcagaagcaaaagtaaaagcagatgaggccaagctgaatgctcaagaagtgctgcagaag
accaataggaccaagcagcgtgtggatgacagcaacgaggagctgcgcaggctcatcaga
cagatccgagacttcctcacccaagaaggagcagatctggagagcattgaggctgtggct
aacgaggtgctgcagatgcagatgcccaccacgccggatcagctgcagaatctgacagca
gatattcgggaacgtgtggccagcctgtctgacgtggcagatatccttaacgagagcgct
gctgatattgagagagctgaggccctgctggagcaggcccgcaaagccaggaaagaggca
tctgatgtgaagagcacagctgagctggtacaggaagccctggaccaggcagaaaaagct
cagacagctgtgactgaggccttgaagcaggccactagtgacatcaagggaacacaggat
ctgcttgtatctgtggagtcagagacggcagattcagagttcaagctgagtaatgctact
cagaggctacttcagctggaaaaggatgtagctcttttgaaagaaaaagcactcaacact
tctaccagtgctgaaatgacagagagagacacagacagtgtcagtgagctggcagaacag
atcaaaaaggatctggacacagagctgaaggataaatatggtactgtggaggagctcatc
actcaaaaggctcagggtgtagcagatgctaagaaaagagctgagatgcttcaacaggaa
gccaaagagctgctgctgcaagctagtgacaaactacaacttctcaaagatttggaaaaa
tcctacgatgaaaaccagaagacgctggaagataaagccaaccagctgatggatctagaa
aaggctgtgaaagagttacttcaagaaattagccagaaagccaccttatacagcacctgt
ctgttttaa

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