Pangasianodon hypophthalmus (striped catfish): 113529797
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Entry
113529797 CDS
T05759
Name
(RefSeq) homeobox protein TGIF2-like
KO
K19553
homeobox protein TGIF2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113529797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113529797
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113529797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
113529797
NCBI-ProteinID:
XP_026775065
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MKSVKRVFEEEHSGETEFSAMSDSDPCEDDAYPLNLSTGARGASAKRRRRGNLPKESVQI
LRSWLYEHRFNAYPSEQEKLSLSGQTNLSISQICNWFINARRRLLPDLLRKDGKDPTQFT
ISRRASKSDSRSVGSASPDHSTPPLVPASRPSVIRPAPALDLSMLGNTATAILTGAGCLV
GSGLTGRDGSVQTLVQVDTRGLIKKESVNGPPSVTTIPGSSSSSPSLGTMSPTVVLFNTP
PPTPPELCPHDFSDLKLLVDAALQRAAEQENQRQKEQPSTRVPCSVPVSVSGTEAPSRNT
EQEKSCESLSSSSKSDSAPSLQEKAILPVSVPVLNASASALPASEAGVSLPVVPHRVAGA
VNFQPNGVWSVVRPASPPPTSVTHTWSSQHTLHAVREAVN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgtcaaaagagtgtttgaagaggagcacagtggagagacagagttttctgcc
atgtcagacagtgatccctgtgaggatgatgcttacccactcaatctttccaccggtgcc
cgtggagcttctgctaagcgtcgccgccgggggaacctgccaaaagagtctgttcagatt
ctgaggagctggctatatgagcatcgttttaacgcttatccctctgagcaggagaagctc
agtctgtcaggacagactaatctctccatctctcagatctgtaactggttcatcaatgca
cggcgacggctgctccctgacctgctcaggaaggacggaaaggacccaactcagttcaca
atctcccgtcgcgccagcaaatcagacagccggtcagttggctccgcctcaccagaccac
tccacccctccactggtcccggcatctcgcccctctgtcatccgccctgcccctgcattg
gacctgagcatgctgggtaatacagcgactgccatcttgactggggctggctgtttagtg
ggatcaggtttaacaggccgagacggtagtgtccagaccctcgtgcaggtggacactcgc
ggcctgatcaagaaagaaagtgtgaatggacctcctagtgtaactactattccaggctct
tcttccagcagcccaagcctgggaacgatgagtcctacagtggtgctgttcaacacgccg
ccccctacacccccagagctctgcccacatgacttcagcgacctcaagctgctcgtagat
gcagccttacagagagcagcagagcaggaaaaccagagacagaaggagcagccttcaact
agagtgccctgttctgttcctgtgtctgtttcaggaacagaagctccaagtaggaacaca
gagcaggaaaagagctgtgaaagcctgagctccagcagcaaatctgactctgctccaagc
ctgcaggagaaggccatccttcctgtctctgtgcctgtgttaaatgcctctgcttccgct
cttcctgccagtgaagcgggcgttagcctgccagtggttccacatagagttgccggagca
gtgaattttcagccaaatggtgtgtggagtgtggtcagaccagctagtccacccccaacc
agcgtcacacacacctggagctcacagcacacactccacgctgtcagagaagcagtcaac
tga
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