Pangasianodon hypophthalmus (striped catfish): 113529828
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Entry
113529828 CDS
T05759
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113529828 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113529828 (abcc8)
Transporters [BR:
phyp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
113529828 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_23
nSTAND1
TMD0_ABC
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
113529828
NCBI-ProteinID:
XP_026775139
LinkDB
All DBs
Position
Unknown
AA seq
1599 aa
AA seq
DB search
MISRYRPSPGSTMSLSFCGSENNSAAYNVDRGVLNNGCFLDALTVVPHVFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGFTQSLHLHLYM
PASLAFMAAITSIIYYHNIETSNFPKLLLALLIYWILAFITKTIKFAKYTEHGIGMRQLR
YCLTGLLVLLYGLLLTVEINVILGRRYMCFAHPTEVKPPEDLQDLGVRFLQPFVNLLSKG
TYWWMNTFITSAHRRPIDLKVIGKLPIAMRALTNYLKLRKAFEAQKRPDGLQPQGPQWIW
RALREAFGKPLILSITFRFLADLLGFAGPLCISGIVHHISKKNRTIQAPAQLLGVYFISS
QEFLANAYVLAVMLFFALLLQRTILQASYYAAIQTGINLRGAIQTKIYNKIMRLCTSNMS
MGEMTVGQICNLIAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATIIA
LLAPVQYFVATKLSQTQKTTLEYSSERLKKTNELLRGIKLLKLYSWEHIFCSSVEETRGK
ELTSLQAFALYTSISIFMNAAIPIAAVLTTFVVHVHLSDDADLSPAVAFASLSLFHILVT
PLFLLSSVVRSTVKALVSVQKLSEFFSSDEIGEEQEPKATIPASSTNHSNYQALPLKVVN
RKRPVREEWNSFGLQSEQYIEASAVEDDDICIKISNGYFSWTDGAPTLSNVNIKIPFGQL
TMIVGQVGCGKSSLLLAALGEMQRISGTVTWNSIPKLDSEGDESPDASSDEEFQKRGAVA
YASQKPWLLNASVVENITFEMPLIKQRYKTVIEACSLQPDIDILPQGDQTEIGERGIILS
GGQRQRISVARALYQTTNVVFLDDPFSALDIHLSDHLMQEGILKLLREEKRTVVLVTHKL
QYLPHADWIIAMKDGTIQTEGTLKDIQKSEPELFEQWKALMHRQDQEFEKETVAEGTTVL
ERKNLRRAMYSREALKTEEEEEALGIAFTEESVESDDEDNLSQAMRHRTTIPWRSCGKYL
SSAGLLLLPLLLLSQLLKHSFMVAIDVWLAHWTSDVIHAKINAVRHNCTLVQDCGFSHSS
YLLVFSVLCCLGIALCLVTSVAVEWTGLSVAKELHRNLLNNIILAPMRLFETTPLGSLLN
RFSADTNTIDQHIPTTLECLIRSTLLCVSALGVISYVTPVFLIALTPLAIACYFIQKYFR
VAFKDLHQLEDSTQLPLLSHFSETIEGLSTIRAFRYEARFRQRLLELTDANNVASLFLTA
ANRWLEVRMEYIGACIVLVAAVASITSNLYNHLSTGLVGLGLTYALMVSNYLNWMVRNLA
DMEVQLGAVKRINNLLKTEPENYEGLLSLSQIPEGWPQQGEIHIQNLSVRYDSTLKPVLK
HANAHIRPGQKVGICGRTGSGKSSFSLAFFRMVDAFEGRIIIDDIDIAKLPLQTLRSRLS
IILQDPILFSGTIRFNLDPEMKATDSMLWEALEIAQLKPVVQTLHGGLDAMVTEGGENFS
QGQRQLFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAFADRTVVIIAHRVHTI
LNADLVMVMKRGEILEYDKPEVLLSTEGSAFASFVRADK
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccgctacagaccgagcccaggctccaccatgtccctgtctttctgtggcagc
gagaacaactccgctgcctacaatgtggaccgtggcgtgctcaacaatggatgctttctc
gatgccctcactgtggtgccccatgtcttcctgctcttcatcaccttccccatcctcttc
attggttggggcagccagagctccaaggttcacatccatcacagcacatggcttcatttc
cctggacacaacctgcgctggatcctcaccttcatccttctgtttgtgctggtgtgcgag
atcgcagagggcattgtctcagatgggtttacacagtctcttcatctacatctctacatg
cctgcatccctggctttcatggctgctataacttctataatctactaccacaacatagag
acttccaattttcccaagttgttgctagcattgcttatttattggatcttggcatttatc
actaaaactatcaagtttgccaagtacacagagcacggcatcggtatgagacagttgcgt
tattgcttgaccggcctccttgtcctgctctatggcctgctactgactgtggagatcaac
gtcatactggggcggcgctatatgtgttttgcccatcccactgaggtaaagcctcctgaa
gacctgcaggacctgggtgtgcgttttctgcagccatttgtcaatctgctgtctaagggt
acatactggtggatgaacacttttatcacctctgctcacagacgccccattgacctgaag
gtcatcggcaaactgcccattgccatgagggcactcactaattatctgaaactgcgcaag
gcctttgaagcccagaagagacctgacggcctccagccgcagggacctcagtggatctgg
agggctctacgtgaggcctttgggaagcccttgatcctgagcattaccttccgcttcctg
gctgacctgttgggttttgctgggccattgtgcatctcgggtattgtgcaccacatcagc
aagaagaaccgcaccatccaggcaccggcacaattactgggggtctatttcatctcctcg
caggagtttctcgctaatgcctatgtactggctgtgatgctgttctttgctctgcttctg
cagaggaccattctacaagcctcctattacgcagccatacaaactggcatcaacctaaga
ggagccatccagacaaagatttacaataagatcatgcgtctttgcacctcaaacatgtct
atgggggagatgactgtgggccaaatctgcaatttaattgccatagacaccaatcagttg
atgtggttcttcttcctgtgtcccaacctgtgggccatgccagtacagattatagtgggt
gtgattctgctctactaccttctgggaataagtgccttgatcggagcaaccatcattgcc
ctcctggcccctgtgcagtactttgtggctaccaaattgtcccaaacacaaaaaaccact
ctggagtactccagtgagcggctgaagaaaaccaatgagctgttgcgtggtatcaagcta
ctgaagctctactcctgggagcacatcttctgttccagcgtggaggagaccaggggaaaa
gagctgaccagcctgcaggcctttgctctctatacctccatctcaatattcatgaatgcc
gctataccaattgcagcagttcttactacatttgtagtccatgtgcacctgtctgacgat
gcagatctatccccagctgtagcattcgcctcactctcccttttccacatcctggtcaca
cctctcttcctcctgtcaagtgtggttcgctcaacggtcaaagcccttgtcagtgtgcag
aagctgagtgagttcttctccagtgatgagattggagaagagcaagagcctaaggccacc
attccagccagctccaccaaccacagcaattaccaagcccttccactgaaagttgtgaac
cgtaagcgtccagtgagagaggagtggaacagctttgggctacagagtgagcagtacata
gaagcatctgcagtggaggatgacgatatttgcatcaaaataagcaatggatatttcagc
tggactgatggagcacctacactttccaatgtgaacataaagatcccatttggtcagctg
actatgatagtgggacaggtaggctgtggaaaatcctctctgttactggctgcactgggg
gagatgcaaaggatctctggcactgtgacatggaacagtattccaaagctggattcagag
ggagatgaaagtccagatgcatccagtgatgaagaattccagaaaagaggtgctgttgca
tatgcttcccagaagccctggcttcttaatgcctctgtggtagagaacatcacctttgag
atgcctctgatcaaacaaaggtataagacagtgattgaggcatgctccctgcaaccagat
atcgacatcctaccacagggggaccagacagagattggtgaaagaggaatcatcctctca
ggaggccagagacagcgtatcagtgtggcgcgtgccctttatcagaccaccaatgtagtc
ttcctggatgacccgttctcagcactggacatccatctaagtgatcatctgatgcaggaa
ggtattctgaaactgctccgggaggagaagaggaccgtggtgctggtcacacacaaactt
cagtacctgcctcatgcagactggatcattgcgatgaaggatggtacgatccagacagag
ggcacgctgaaagacatccagaaatctgaacctgaactgtttgagcagtggaaagccctc
atgcatcgccaggaccaggagtttgagaaggagactgtagcagagggtacgacggtatta
gaaaggaagaacctgagaagggccatgtactccagagaggcactgaagacagaggaagaa
gaggaagcactggggattgcattcacagaggagtcggtggagagtgatgatgaggataac
ctgtcccaggcaatgaggcacagaaccaccatcccttggcgttcatgtgggaagtacctg
agctctgctggtctactgctgctgcccctactgcttctctctcagctgctcaaacactcg
ttcatggtggccatcgacgtctggctcgctcactggacctctgatgtcatccatgccaag
atcaacgctgttcgacacaactgcacactggtgcaggactgtgggttcagtcattcatcg
tatcttctggtgttcagtgtgctgtgctgcctgggcattgcgctgtgtttggtcacgtct
gtggctgtggagtggacagggctgagtgtggccaaagagctgcaccgtaacctgctaaat
aacatcatacttgcccccatgaggctctttgagacaactcctttgggaagccttctcaat
cgattctctgctgacacaaacacaatagaccagcatattcctactactttggagtgtttg
attcgctccacattgctgtgtgtgtctgcgctgggtgttatctcatatgtcacacctgtt
ttcctcatcgctctcactccactcgccattgcctgctacttcatccagaaatacttcaga
gtggcattcaaagatctgcatcagcttgaggacagtacccagctccctttactgtctcac
ttctctgagacaatagagggtctcagcaccatccgggccttcaggtatgaggccagattt
cggcagagacttctggagcttacggatgctaataacgtcgcatcacttttcctcactgct
gccaaccgttggctggaagtccgcatggagtatattggagcctgtattgtccttgtagct
gcagtggcctccatcaccagcaacctttacaaccatctgtctactggcctggtggggctg
ggactgacctacgctctgatggtatcgaactatcttaactggatggtgcgtaacctggct
gatatggaggttcaattaggggcagtgaagaggataaacaacctgctgaagactgagcca
gagaactatgaggggctgctctctttgtctcagatccctgagggctggccacagcagggc
gagattcacatccagaacctgagtgtgaggtacgacagcacgttgaagccggtcctaaag
catgccaatgctcacatcagaccaggacaaaaggtcggcatctgtggcaggacaggaagt
ggcaaatcgtccttctctttagctttcttccgcatggtggatgcctttgagggacggata
atcatagatgatattgacatagcaaagttgcctcttcagacactgaggagccgtttatct
attatccttcaagatcccattctcttcagtggaacaatacgttttaatttagacccagag
atgaaggctacagacagcatgctttgggaagctctcgaaattgcccaactcaaaccagta
gtgcaaaccctgcatgggggacttgatgccatggtgacagaaggtggggagaatttcagt
cagggacaacgtcagctgttctgcctggcacgagcatttgtacgcaaaagcagcattctg
atcatggatgaggccactgcctccatagatatggccacagagagtattctgcagaaagtt
gtaatgacggccttcgcagacagaacagtggtcatcatagcgcatcgagtgcacaccatc
ctgaacgcagatctggtgatggtgatgaagagaggggagattctggagtacgataaaccc
gaggtccttctcagtacagagggaagcgctttcgcctcttttgttcgggcagacaaataa
DBGET
integrated database retrieval system
