Pangasianodon hypophthalmus (striped catfish): 113529832
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Entry
113529832 CDS
T05759
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113529832 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113529832 (fanci)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
113529832 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_HD2
FANCI_S4
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
113529832
NCBI-ProteinID:
XP_026775148
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MKAAIDKILSLSEGDGIKELQHHLTSLSHDQLTALITNAALKGKDTAALIKAIFRGSPVS
SSDGASRRLCVYKHCIPLCQSGDLQTEVASDIIGLLMLETHALPGPALAALASLYVDAIK
GGEMGSGKSLELFPTILTALAATETLAYGKGELSGEEYKKQLINSLCSSRWDPQCVIHLT
TMFRDVPLSPEELQFLIEKVLRMFLKLDLQEIPPLIYQLLLLSAKGCKRLLLEGIINYFR
EQDLCQKEEQSKGESKDVEVQTIPQDQLRHVEGTAILHIVFAIRLDHELGREFLKSIKVS
QGQPLCPFSIALLLSVARIQRYEEQVFEFLKGAITKNFKDEQAQQGSKFLQDLLPSCHSI
SHMIMDTVRNSVFGWDHVTQSLVQLGFILMDLFGPKAGPFGKTTEIPTATAKTPSQLACR
LGGQVLLESFKMHEPIRGEILEQVLNRLVTKTASPVTHFIDLLSNIVISAPMILLESSSK
VIETFDQLSFLPLTTVQGLLKAVQPLLKVSMSLKDALILVLRKAMFSSQLDGRKSAVAGF
LLLLKNFRVLGSLASSQCSQALTSSQVQADVHSRYNAAANEAFCLEILSSLRRCLSQQAD
VRLMLYEGFHDVLRRNSQLAGSIMQTLLSQLRRYYEPEQDLLPPVKLESCINAQGDQVFL
QEPLAHLFSCTIHCLLWYQSMRDASGGESDDEEEDEEGFQDELHAILESVTRRMIKCELE
DFELDKSAEFSMASSVGVKNSIYAVLVMGVYEVLIEYNFITGNFSKSRFQDVLELFNRYN
KLAEILREKSGKGRTPSSKTPRSLLSVGFVSTLLTALFRDSTQTHEESLSVLRSSGEFLR
YSVSVALQKVQQLEETGYTDGPDGQNSDKTFRHLCEITSVLMWRYTNIPSSVEDAGKKEK
NYSVSLLCLEGLLRIFSTILQQYPTKVSSFLCSLDVCREEEEGAPENANLTEKAAFYIRQ
FQRALFSQLSGGEEDFSSREAQLLVSILSVLFRLLEPTSQQFLQMITWTVKICKETSFED
ISFSKGLLSLLFSLHVLYKSPVSLLWELCQDIHSQLGDIDQDVEVEKQSHFAIVSMKTAA
STTLLVLSQVGRVLDEVDWLIAKKKGQLTSDRTTTGGTSQPSAQQDPVEKAMTLQLGTLL
TALNELVQTALPPGACTDALLRELSRTYTILTTLIKYYIQLCVAHPGQLPARLEKLVKLS
GSHLTPQCYSFITYVQSGEMNGGVNERKKKRKEEEAVVAASAKVLRDTKSIPTLIFNIEQ
YEKFLIVLSKKSKVNLMQYMKLSTSRDFRINTATLEAALQEQHESQQVCLLIHFYISKSL
GLLFSSYMDSNVR
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagctattgacaagattttgtccttatcggagggagatggaataaaggagctc
cagcatcacctcacttctctgtctcacgatcagttgactgcactgatcacaaatgccgcc
ctgaaaggaaaggatactgcagccttgatcaaagctatattcagaggctcaccagtgagt
agttcagatggggccagtcgcaggttgtgtgtgtataagcactgtattcctctctgtcaa
tcgggagacctacagacagaggtggcttcagatattatcgggttgctaatgttagagaca
catgctctacctggccctgcattggcagcgttggcatctttatatgtcgatgcaataaaa
gggggtgaaatgggtagtggtaaatcactggagctcttccctaccatcctcactgccctg
gcagctacagagactttagcttatggcaaaggagagttaagtggagaggaatacaagaaa
cagctgatcaatagcctttgttcaagcaggtgggacccgcagtgtgtgatccatcttacc
accatgttcagggatgtgcccttatctccagaggagctgcagtttctgattgagaaagtc
ctgaggatgttccttaagttggacctgcaagaaatcccccctctaatttaccagctgctg
cttctgtctgccaagggttgtaaaaggctcctgctggaaggaattattaactactttcga
gaacaggacctttgccagaaagaagagcagagcaaaggagagagtaaggatgttgaggtg
caaaccatcccacaggaccagctgagacatgtggaaggaactgctattttgcacattgta
tttgccattcgccttgatcatgagcttggcagggagttcttaaaaagcatcaaggtatct
cagggtcagccactgtgtcctttcagtattgctctgctgctttctgtggctcgcattcag
cgctacgaagagcaagtgtttgagttcttgaaaggtgcaatcactaagaatttcaaggat
gagcaagctcagcaaggttctaagtttctgcaggatctgctaccctcatgccacagtatc
tctcacatgattatggacacggtcagaaacagtgtctttggctgggatcacgtcacacag
agcctggtgcagttaggcttcatccttatggacttatttggaccaaaggcaggacctttt
gggaagaccactgaaattcccactgctacagctaaaacaccttcccaactagcatgtaga
cttggtgggcaagttcttctagagagcttcaagatgcatgagccaatcaggggagaaatc
ctggaacaagtcctgaatcgattggttactaagacagcttcaccagttacacattttatt
gacctgctttccaacattgtgatatccgctcccatgatcctcttggagtcctcctcaaaa
gtgatagagacttttgaccagttatctttcctgcctcttaccacagtgcaggggctactc
aaagcagtgcagccactgctcaaggtcagtatgagcttaaaggatgccctaattttggtg
ctgaggaaagccatgttctccagccagttagatggacggaagtctgctgtggctggcttc
ctcttgctgctgaagaacttccgggtcttggggagtctggcctccagtcagtgcagccag
gcgctgacctccagccaggtccaggcagatgtccactcgcgctataatgctgctgctaat
gaggctttctgtctggagatcctgagcagcctccgccgctgtctcagccagcaggcggat
gtgcgtctcatgctgtacgagggattccatgatgttctccgacgcaactctcagttggca
gggtccatcatgcagacccttctgtcacagctgaggcgatactatgagccagagcaggac
cttttgccacctgtgaagttggagtcttgcataaatgcacagggagatcaggtcttcctc
caggagcctctggctcacttgttctcctgtaccatccactgcctgctctggtatcagagt
atgcgagatgcctccggaggtgagagtgatgatgaagaggaagatgaagaagggttccag
gatgaactccatgcaattctggagagtgtaactagacgcatgatcaagtgtgagctggag
gactttgagctggataagtctgctgagttctccatggcatccagtgttggggtgaagaac
agtatatatgctgtgctggtgatgggagtgtatgaggttctcatagaatacaacttcatc
acaggcaacttcagcaaaagccgttttcaggatgtcctggagctttttaatcgttacaac
aaactggctgagattctgagggagaagtcaggaaagggccggacaccctctagtaaaact
ccccggagtctgctctctgttggatttgtatctaccctactgactgctctcttccgagac
agtactcagactcatgaggagagcttgtcagtgctgcgctccagtggagagtttcttcgc
tacagtgtgagcgtagccctgcagaaggttcaacagctggaagagacaggctacacagat
ggacctgatggccagaactctgacaagactttccgccatctctgtgaaatcactagtgtg
ctgatgtggcgatacaccaacatcccatcatctgtggaggatgctgggaagaaggagaag
aattacagcgtgtctctgctgtgtctggaggggttgctgcgtatctttagcaccatccta
cagcaataccccaccaaagtgtccagcttcctgtgttctcttgatgtttgcagagaggag
gaggagggtgcccctgaaaatgccaacttgacagaaaaggctgccttctacattcggcaa
tttcagcgtgccctgttcagtcagctgagtggaggagaggaggacttcagcagcagagag
gcccagctgctagtcagcatcctcagtgtgctgttccgcctgctggagcccacctcccag
cagtttctccagatgattacctggacagtaaaaatttgcaaagaaactagcttcgaggac
atatccttcagtaagggtctactgtctctgctcttcagtctgcatgtcctctacaaaagt
cctgtgtctctgctgtgggagctctgtcaggacattcacagtcagctaggggacatagac
caggatgtggaggtggagaagcagtctcactttgcaattgtaagcatgaagacagcagcg
tccaccacgcttttagtgttgtctcaggtagggagggtattggatgaggtggactggttg
attgccaagaaaaaaggccagttaacatctgatagaacaactacaggaggcacctcacag
ccgtcagcccagcaggaccctgtggaaaaagcaatgactctgcagttaggcacactgctg
acagctctgaatgagcttgtgcaaacagctctgcctcctggtgcctgcacagacgccctg
ctgcgagagctcagccgaacctacaccattctcaccaccctaatcaaatactatatccag
ttgtgtgtagctcatcctggtcaactgcctgctcgtctggagaaactggtgaagctatca
ggctctcacctcacccctcagtgctactcattcatcacatatgtacagagtggtgagatg
aatggaggagtaaatgagaggaagaagaaaagaaaagaagaggaagcagttgtggctgcc
tctgctaaggttctacgtgataccaaatctatacccactctgatcttcaatattgaacag
tatgagaagtttctaattgttctctccaagaagtcaaaggtaaatctgatgcagtatatg
aagctgagcacttctcgagactttcggatcaatactgccacactggaggctgcactacaa
gagcagcacgagagccagcaggtttgtttgcttatacacttttacatttccaaatcttta
ggcttattatttagtagctacatggacagtaatgttagatga
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integrated database retrieval system
