Pangasianodon hypophthalmus (striped catfish): 113529893
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Entry
113529893 CDS
T05759
Symbol
cspg4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phyp00535
]
113529893 (cspg4)
04091 Lectins [BR:
phyp04091
]
113529893 (cspg4)
Proteoglycans [BR:
phyp00535
]
Cell surface proteoglycans
Others
113529893 (cspg4)
Lectins [BR:
phyp04091
]
C-Type lectins
Others
113529893 (cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Orf78
DAG1
Motif
Other DBs
NCBI-GeneID:
113529893
NCBI-ProteinID:
XP_026775280
LinkDB
All DBs
Position
Unknown
AA seq
2314 aa
AA seq
DB search
MRVLRLVLCAVLALLCLPQASHGVSYFGDSYCRIDAVQDLLSFDLSLQFKTSRRSGLLLL
AAGNRDYLSLELINGRLQARMDMGSGEVVLSSSSGVQLNNLIDHHVSLTLQDNKLTMNVD
SLFSTSVDLQGEEEDLSIDIGVFLGGVRDLDVQYLSTASPSLRGCMSDIKFESHQFNILS
SAAAVCHDTKEGCSSEFEAGDGEATSFISPDSFVSFPTWTRANTGSRNMELLMKTTIEDA
LLLFHPGHESDFIALGMTGGYIKGVADLGSGIVTLNNMKVKLDDDQWHRIRMQVDPNRFE
ITVDSQSVSVPLNGSEKLDLVGNLYLGGIQGKMKDVFRDDYLTRMEEEVTSESFIGCLGE
IKVNQKDRSLQDALITKDVHVKCEGEDYDYSSYYDFETTTTTAPPRLRYVGVTPDERHCL
PTEDMPEIFRNVSKLLDVTPLLVPEGGEAFIDISNLNPTLNLNAAGIRQSQIIFTLQNDP
WYGLVDMNINTRRTKKFTLLDVVNKKIKYLHDGNEKYGDQIQLEVVAHGSNLPECLKAPH
QYILPVEILPVNDVPQLSGGDIAITANGRTRLSPNLVKIADSDKRCDKLIVTVTSDPNPH
GYLENSEHPGWNLREFTCRQLKDGLIYYVDRGGSVGGLTLEVSDSNQISQSANFRLAVTQ
PQLSLVTNTGLRLIQGSNSTIGIQNLAVSATPKNGDIIFNVTQPLRFGELRIIAHDGVPK
RVSQFYQSDLEQNRLVYTTTTLADLEDTETEYIHFNAQLGQFTLPDNTFVIKIMPAQLVM
ANIVPLEIVTREPRVIKQSELEAMVKGKNIDSAFIRYIIWKRPTLGALMLRDGDLSDRDS
FTQQDIEAGHISYRPTIHRPFDAEDNFQFKVFVEDQYSQLYTYPISVKADSNIPVLTNER
LLVLKGNESTITKEHLWMQTPQSTDFVYRIVQDPLHGHLIRDSPPGVPRFEGAIHVFSNE
DILLNRLIYKHDGSEISHDQFTFLVFEVNTGSTNVQTEGQEVLKGTFTIAVQSRNDYVPQ
RVINKPFHVVRNGQRLLKTDDILFRDDDSGFNDTQLVYVRMGILSGSIVSSADASQPLYR
FTQADLRDGNVLFVHHGADRDLFQLQVSDGLHKTTALLEVQAGEPYLHVVNNTMVVMDYG
STKTLDTSLLGTESNMDIRSASEIIYDINTPPSDGRIIVSGVEATRFTQEDLKKGVVSYE
HSDQSLQSTDSFTFTVRAKDMSEKDTFRIKIFKQGYLSEPQVTSNKVIIAYEGEHSVIDQ
DHLRVEQADISPTEIVFSIKEPPRIGHVVKLTNDTESTVSPVLDYIQSFTQEDINMGTIL
YVSASLQGQDMFTLDVSNGFTIVEDLEVQVDIMPRLIPVQVANLTVREGDAVTFSEDILN
ITHPFYRSVHIEFLMEEAPQHGEIRYLDRDDDGLVSFTWDDVQQGTVYYLHDSTETTEDS
FTFSATAFELMRRSLPITISITVIPVNDEAPQLRHNTGLELLVGEETEITSKALSTEDMD
TPPDKLVYNIEATKNGIIALKESPDYSIERFTQAQINNGEVIFIHKGSESGSFSFTVTDG
DHTSPLHRFVVAVRQLTISMEVQGELMVFPGSRQVINSDILRAVTSEDGDEINYSLVRPP
RLGRIIKPNQSGQFEEISQFTQTELDAGAVYYEHQMPLESFWVVKDTVELELSSPPAAKL
QHILPVTVSYFATHSNVSSQLWKNKGMSVVQGQSKVFDISILDASNLLGSVPQEKRAGQD
IVFEVRQFPIHGRLTLGGDDLPRDAPYFLQDDISERKLEYYHDDSGASSDRFSFRVRLNP
HGRPPQAVPGAVVLDEVFLISIRRRDASPPELVSLDLLLEALQGSTSVLSKQYFNTIDQD
STPDEVRFTILKGPTNGHIIYKDTGEKITQFTQEEVNMGQVAFVSDGSLSEGSLEFTVSD
GKHQSEPHMMRIGIMAKKLTLNKGQEIQVKQGDDETPITEAMLKASTGGPTEEEVLYKIT
KVPKYAVVMVDRQPTSAFTQKQIREGRVSVRFIKSTSSNDSFSFVARSRAANVSSSLNIT
VKPLVNVAKDPLLPRGTIVLVDRKLLDATPLANKTKTSPTFSLTHQPKGARFIRRGGSAD
GQPVESFTQRDLDEGQVALEVLNSTGDPKGKGQDQDEARFLLKAHGVPPAECTLSFQTVP
YDPAGIYDATVLKVPLSVANSDTSKADQPDARWRGDGNYEAGPTTPSTSSNKSPVSRRNS
VWAILIPILVILLLLLVAGLLAYYLVHRNKTGKHNVQNAASKPKNGEVAQETFRKTDPAN
NIPMSNMESKDADPELLQHCRTTNPALKKNQYWV
NT seq
6945 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgctgcgtttagtcctgtgtgctgtactggccctgctatgtctgcctcaggca
agccatggagtttcttactttggggatagctactgccggatagatgcggtgcaggatctg
ttaagttttgatctgtcactccagtttaagacaagcagacgcagcgggctgctcctccta
gctgctggaaacagagactacctgtctctggagctcatcaatggcaggttacaggcaaga
atggatatgggatcaggggaagtggtgctgagctcctcctctggtgtgcaacttaacaat
cttatagatcatcatgtttctcttacactacaagacaacaaactcaccatgaatgtggac
agccttttttcgacttctgttgacttgcaaggagaggaggaggacctcagtattgatata
ggtgtgttccttggaggcgtaagagacttggatgttcagtacctcagcactgctagcccc
tccctccgtggctgtatgagcgacataaagtttgagtctcatcagtttaatattttgtca
tcagctgcagctgtctgccatgacactaaagaaggctgtagcagtgagtttgaagcagga
gatggggaggccaccagctttatcagcccagactcctttgtatctttcccaacctggacc
agagccaacactggttctcgcaatatggaattactgatgaaaactactattgaagatgct
ctgcttctctttcatccaggtcatgagtctgatttcattgccttgggtatgacaggaggg
tacataaaaggcgtggcagatctgggcagtggcatagtaactctaaacaacatgaaagta
aagctggatgatgatcagtggcacaggataagaatgcaggttgatccaaacaggtttgaa
ataacagtggatagtcagtccgtctctgttcctctaaatggatcagaaaaactggacctt
gtgggaaatctgtacttaggaggtatccaggggaaaatgaaagatgtattccgtgatgac
tacctgactcgtatggaagaggaggtaacatctgagtctttcattggctgcttaggagaa
ataaaggtgaaccagaaagacagaagcctacaggatgccctgataaccaaagatgttcat
gttaaatgtgaaggcgaagattatgactattccagctattacgattttgaaacaaccaca
actacagccccaccacggctaagatatgtgggtgtaacaccagatgaaagacactgttta
ccaactgaggacatgccagagatctttcgaaatgtctctaagctcttggacgtcacccct
ctgctggttccagagggtggagaagcttttattgatataagcaacctgaacccaacgctc
aatcttaatgctgcaggaatacgacagtctcaaattatcttcacacttcagaatgatcct
tggtacgggcttgtagacatgaatatcaatacgaggcgcactaagaagtttactctccta
gatgtggtgaataagaagattaagtatcttcatgatggcaatgaaaagtatggtgatcaa
atccaactagaagtggttgcacatggttccaacctcccggagtgtttgaaagctccccac
caatacattctcccagtggaaattctccctgtcaatgacgtaccccagcttagtggtgga
gacattgcaatcacagcaaatggacgaactcgtctaagccccaaccttgtcaaaatagct
gattccgataagcggtgtgacaagttgattgttactgttacctcagatccaaaccctcat
ggctacttagagaattcagagcaccctggttggaacctgagagagttcacctgcagacag
ctcaaggatggacttatttactatgtcgacagaggaggctcagtgggtggactcacccta
gaagtttcagatagtaatcagatcagccagtctgccaactttagactggcagttactcag
ccacagctgagcctggtgacgaacactggactacgcctcattcagggcagcaactccacc
ataggaatacagaacctggctgtttctgccactcccaaaaatggcgatattatattcaat
gttacacagcctttgagatttggagaattgcgaattattgcacatgatggcgtgccaaag
agagtgtcacaattttatcaatctgatctggagcagaatagactagtgtacactactaca
acgttagctgatctggaggacacagaaacagagtatattcattttaatgctcagcttgga
cagttcactcttccagacaatacatttgtaattaagatcatgcctgctcagctagtaatg
gcaaatatcgtccctcttgaaattgtaacaagggagccaagagttatcaaacaatccgaa
ttagaagctatggtaaaagggaagaatattgactcagcttttatcagatacatcatttgg
aagcgtccgacactgggtgccttgatgttgcgggatggagatttgtcagatagagatagc
ttcacccaacaggatattgaggctggacatatcagctacagacccacaatccacaggcct
tttgatgctgaggacaattttcagtttaaggtttttgtagaggatcaatactctcaatta
tacacttacccaatcagtgtcaaagctgactccaatatccctgtactaaccaatgagaga
ctgctggtactaaaagggaatgagagtaccattactaaagaacacctctggatgcagact
ccacagtccacagactttgtgtacaggattgtacaagaccctttgcatggacatctcatt
cgggactcccctcccggtgtgccaaggttcgagggtgcaattcatgtcttcagtaatgaa
gatatactcttaaacaggctcatctataaacatgatggctcagagatcagccatgaccaa
ttcacctttcttgtctttgaagtaaatacaggtagcactaatgtgcagactgaaggacag
gaggtgctcaaaggaacgttcaccatagcagtccagtccagaaatgattatgtacctcag
agggtcattaataaacccttccatgtggtaagaaatggccagcgtttactgaaaaccgat
gacattctattcagggatgacgactctggctttaatgacacccaactggtttatgttcgc
atgggaattctctcaggtagcattgtgtcttctgcagacgcttcacaacccctctaccgt
ttcacgcaggcagacctgagagatgggaatgttctgtttgtccatcatggtgctgaccgg
gatctttttcagcttcaagtgtctgatggcttgcacaagaccacagcactgctagaggtg
caggcaggtgaaccatacctgcatgtagtcaataacaccatggttgtcatggactatgga
agtaccaagactctggacaccagtcttctgggcacagagtccaacatggacattaggagt
gcttcagaaattatatatgatataaacactcctcctagtgatggcaggattatagtcagt
ggtgttgaggctactcggttcactcaggaagacctcaagaaaggtgtggtatcctatgag
cacagtgatcagagcctccagtccacagactcattcaccttcactgtgcgtgcaaaagac
atgtctgagaaagacactttcagaattaagatcttcaagcaaggatatttgtctgaacct
caagttacctccaataaagtgatcattgcatatgagggtgagcattctgtcatcgatcag
gatcatctcagggtggagcaggccgacatctcgcctacagagatagtgtttagcattaaa
gaacctccacgtattggccatgtggtcaaactgaccaatgatactgagagcacagtgtct
cctgtgctggactatatccagtcttttacacaagaggacataaatatgggcacaatcttg
tatgtgtcagcctcactacagggtcaagacatgttcactctagatgtcagtaatggcttc
accatagtcgaggacctagaggtgcaggtggacatcatgccccggctcatacctgtccaa
gtggccaacctcacggtgagggaaggagatgctgtgactttttccgaagacattctcaac
atcacgcaccctttctaccggtctgttcatattgaattccttatggaggaggcacctcaa
catggagagatcagatatctggacagggatgatgatgggcttgtctctttcacctgggat
gatgtgcagcagggaacagtctactaccttcacgacagcacagagaccacagaggacagt
ttcactttctcagccactgcttttgagttaatgcgccgcagcctccccatcaccatcagc
atcacagtgatccccgtcaacgatgaggcgccacagctgaggcacaacacaggcctggag
cttcttgttggtgaagaaacagaaatcacaagcaaagcactgagcacagaagatatggac
acccctccagacaagctggtatacaacattgaggcaaccaagaatggaatcattgctctg
aaagagtcacctgattacagtattgaaagattcacccaagctcagatcaacaacggcgaa
gtcattttcatccataaaggatctgaatctggcagtttcagtttcacagtgacagatgga
gaccacacatctcctctccaccgcttcgtcgttgctgtccggcagctgacaatctccatg
gaagtacagggcgagctaatggtttttcctggctccaggcaagtcatcaatagtgatatc
ctgcgagcagtgaccagtgaggatggagatgagatcaactattctcttgtgaggcctcca
cgtctaggacgaatcattaagcccaaccagagtggacaatttgaggaaatcagccaattc
acacaaacggagctggatgctggtgcagtgtattatgaacaccagatgccattggagtcc
ttctgggtagtaaaagacactgtagaacttgagctctcatcaccgccagcggcaaagctc
caacacattctccctgttacagtgtcgtactttgccacccatagcaatgtgtcttcacag
ctgtggaagaacaaaggtatgtcagtggtgcaggggcaatcaaaggtgtttgacatctcc
attctggatgcatccaacctgctaggcagtgtaccacaagaaaaacgggcaggccaggac
atagtttttgaggtacggcagttccctatacatggccgactcactcttggaggtgatgat
cttccccgggatgcaccctatttcctgcaagatgacatcagtgaaaggaagctggagtac
taccatgatgactcaggagcatcttcagacagattctctttccgtgtgcggctgaacccc
catggccgtccccctcaggctgtaccaggtgccgtggtgctggatgaggtctttcttatc
tcaatcagacgaagggacgccagccccccagagctagtcagtctggacctgctgttggag
gctctgcaaggatctactagtgtactgtccaagcagtacttcaacactatagaccaagac
agtacaccagatgaggtcagattcactatcttaaagggccctactaatgggcacatcatc
tacaaggatactggggagaagatcacacagttcacccaagaggaggtgaacatgggccag
gtggcatttgtgagcgatggtagcttgtctgaaggttcactggagttcactgtctctgac
gggaaacaccagtcagagccacacatgatgcgcattggcattatggctaagaaacttacg
cttaataaggggcaggagatccaagtcaagcagggagatgatgagactcctatcacagag
gccatgttgaaagcatccacaggagggccaacagaggaagaagtgctatataaaattaca
aaagttcccaagtatgcagtagtgatggtggacaggcagcctacctctgcttttacccaa
aaacagattagggaagggagagtgagtgttcgcttcatcaagtccacttcttcaaatgac
agtttttcctttgtagcccgcagcagagcagctaacgtttcctccagcctcaacatcaca
gtaaaacccttagtaaatgtggccaaggatcccttactcccacgtggcactatagttctg
gtggacagaaagctgttagatgccaccccacttgccaacaagaccaaaacttcaccaacc
ttcagcttgacccaccagccaaagggagcaaggttcataagaagaggagggtctgcagat
ggccagcctgtggaatccttcacccagagagatctagatgagggacaagtggctctagag
gtcctgaactccactggggatccaaagggcaaaggtcaagatcaggatgaggctcgcttc
ctcctcaaggcacatggagttcctccagcagagtgcactctttccttccagacagtgcct
tatgacccagcaggaatctatgatgccacagtacttaaggtccccctatctgtggccaac
tctgacacaagtaaagcagaccagcctgatgccagatggagaggggatgggaactatgaa
gcaggtcccaccacaccctctaccagctccaataaatcgcctgtttctagacggaactca
gtatgggccatccttatccccatattagttatcctccttctactactcgtagctggtctg
ctagcatactacctggtgcatcgcaacaaaacaggaaagcacaatgtccagaatgctgcc
agcaagccaaaaaatggagaggtggctcaggaaaccttcagaaaaactgatccagcgaat
aacatccccatgtccaatatggagtctaaagacgcagatcctgaattactgcagcactgt
cggacaacaaacccagccctgaaaaagaaccagtactgggtatga
DBGET
integrated database retrieval system
