Pangasianodon hypophthalmus (striped catfish): 113529902
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Entry
113529902 CDS
T05759
Name
(RefSeq) glutamate receptor ionotropic, delta-2 isoform X1
KO
K05207
glutamate receptor delta-2 subunit
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113529902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113529902
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Glutamate (ionotropic)
113529902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
113529902
NCBI-ProteinID:
XP_026775292
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MKVLTPVMLLLAFWSVDWEPVLADSIIHIGAIFDESAKKDDEVFRMAVADLNLNNEILET
EKITFSVEFVDGNNPFQAVQEACELMNRGILALVSSIGCMSAGSLQTLADAMHIPHLFIQ
RAPAGTPRSSCPPTSHGQPDDYTLFVRPPVYLNDVIFQVVMEYTWQKFIIFYDTDYDIRG
IQDFLDKSSQQGMDVSLQKVESNINMMITGMFRTMRMEELHRYRDTLRRAVLFMSPASAK
AFITEVVETNLVAFDCHWIIINEEISDLDVQELVVKSIGRLTLIRQTFPLPQNTSQQCVR
NNHRINNSLCNPKDPKAQTLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLSCIRKGS
KPWQGGRSMLETVKKSGVSGLTNLLEFNDNGTNPNIFFEILGTNYGEDRGRGVSRLATWD
PVHGLNGTLSDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGFAIDVLDALSN
YLGFKYEIYLAPDHKYGSQQADGSWNGLIGELVFKRADVGISALTITPERESVVDFTTRY
MDYSVGVLLRKAERTVDMFACLAPFDLSLWACIAGTVLLVGTLVYLLNWLNPPRLPMGSV
SSTTLYNSMWFVYGSFVQQGGEVPYTTLATRLMMGVWWLFALIVISSYTANLAAFLTISR
IENSIQSLQDLSKQTELPYGTVLDSAVYDQLRSKGMNPFERDPMYSQMWRMINQSGGADN
NVEDSKEGIRKVKYGRFAFVWDAAVLEYVAINDEDCSFYTVSNNAPDRGYGIAMQHGSPY
RDIFSQRILELQQNGDMDILKLKWWPRESPCDLYSAVGTKKSASALDIHSFAGVFFVLAA
GVVLSCLIATVETWWTRRKGSRVPSKEDDKEIDLEHLHRRVNSLCTEDESPHKQFSTSSM
DLTPLDMDSLPAARQALEQISDFRNTHITTTTFIPEQIQTLSRSLSAKAASGFAFGAMPD
QRTGAGPFRQRAPNGGFFRSPIKTMSSIPYQPTPAPSFSYGNDPDRGTSI
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttttgacgcctgtgatgcttctgcttgcattttggagtgtggactgggagcct
gtgctcgccgattccatcattcacatcggggccatatttgatgagtctgccaaaaaggat
gacgaggtgttccgcatggcggtggccgacctcaacctcaacaacgagatccttgagacg
gagaagatcaccttctcggtggagtttgtggatgggaacaaccccttccaggcagtgcag
gaagcctgtgagctgatgaacagaggcatccttgctctggtgagctcaatcggatgcatg
tctgcaggctcgcttcagactctggccgatgccatgcacatcccccatctgtttatccag
cgggcaccagcgggaacccctcgctccagctgccctccaaccagccatgggcaacccgat
gactatacactctttgtccggccccctgtctacctgaatgatgtcatcttccaagtggtg
atggagtacacctggcagaagtttatcatcttctatgacacagattacgatatccggggg
atccaggactttctggacaagtcatctcagcaggggatggacgtttccctgcagaaggtg
gagtcgaacatcaacatgatgatcaccgggatgttccgcaccatgaggatggaagagttg
caccgctacagggacacactgcgccgagccgttctcttcatgagtccagcaagtgccaag
gccttcattacagaggtagtggaaaccaacctggtcgcatttgactgccactggatcatc
ataaacgaggagatctcagatctggatgtgcaggagttggtggtgaagtctataggacgt
ctgactctcatccgacagaccttccctcttcctcagaacaccagccagcaatgtgtacgg
aacaaccaccgcatcaacaactccctctgtaaccccaaagaccccaaggctcagacatta
gagatcaccaaccgctacatctatgacacagtattgctgctggccaacaccttccacagg
aagctggaggaccgcaagtggcacagcatggcgagcctctcatgcatccgcaaaggctcc
aagccatggcagggtggccgctccatgctggagactgtcaaaaagagtggagtgagtggc
ctgacaaatttgctggaattcaacgataatggcacgaaccccaacatcttctttgaaatc
ctggggacgaactatggagaggaccgtggccgtggagtcagcaggctggcgacttgggac
cctgtccatggactaaatggaaccttgtcagaccggaagctggagaataacatgcgcggg
gtggtgctacgtgttgttactgtcctggaggagccgtttgtcatggtgtccgagaatgtg
ttggggaagcccaaaaaatatcagggattcgctattgatgttttggatgccctgtctaat
tacctcggcttcaagtatgagatctatttggctcctgatcacaaatatggcagccaacaa
gctgatggaagctggaatggtctaatcggagagctggtgttcaagagagcagacgtgggg
atctcagcgctgaccatcacgcctgagagagagagtgtagtggacttcaccacacgctac
atggactactcagtgggcgtgctgctgaggaaagctgagcgcacagtggacatgtttgcc
tgcttggcgcctttcgacctgtcgctgtgggcgtgcattgctggcaccgtgctccttgta
ggcacgcttgtgtacctgctcaactggctcaacccaccacggctgcccatgggctctgtg
tcctctaccactctctataactccatgtggttcgtctacggctccttcgtgcagcagggt
ggagaagtaccatacaccactctggccacaaggttgatgatgggtgtttggtggctcttt
gctttgatcgtcatttcttcctacacagctaatctggcagccttcctcaccatctcccgc
attgaaaactccatccagtcactccaggacctgtccaagcagacggagctgccatacggc
actgtcctggactctgccgtgtatgaccagctccgcagtaaaggcatgaaccctttcgag
cgagatcccatgtattcacagatgtggaggatgatcaaccagtcaggaggagccgataat
aacgtggaggactcaaaggagggtattcgcaaggtaaagtacggccgctttgcatttgtg
tgggatgcagctgtgctggagtatgtggccattaatgatgaggactgctccttctacact
gtgagcaacaatgcaccagacagaggctatggcattgccatgcaacacggcagcccttac
agagacatcttttctcagaggatcttggagctgcagcagaatggggacatggatatcctg
aagctgaagtggtggcccagagaaagcccatgtgatctttactctgccgtgggcaccaag
aaaagtgccagtgccctggacatccacagttttgctggcgtgttctttgtgcttgcagcc
ggtgtggtgctgtcctgtcttattgccactgttgagacctggtggacacggaggaagggt
tccagagtgccctctaaggaggatgacaaggagatcgacctggagcacctccaccggcgt
gtgaacagcctgtgcacggaggacgagagcccgcacaagcagttctccacctcttcaatg
gatctgacgccactggacatggactcactgccagcagcacgccaggccctggagcagatc
agcgatttccgtaacacacacatcaccaccaccaccttcatccccgaacagatccagaca
ctgagccgcagcctttctgccaaggcagcatccggcttcgctttcggcgccatgcccgac
cagcggactggcgccgggcccttcaggcagcgtgcgcccaatggaggcttcttccgcagc
cccatcaagaccatgtccagcatcccttaccagcccacaccagccccaagctttagctac
ggcaacgatccagaccggggcacctccatatga
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