Pangasianodon hypophthalmus (striped catfish): 113529985
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Entry
113529985 CDS
T05759
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113529985
04082 Neuroactive ligand signaling
113529985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113529985
Ion channels [BR:
phyp04040
]
Ligand-gated channels
GABA-A
113529985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
113529985
NCBI-ProteinID:
XP_026775425
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MDRILGLLFLTSIGNVIGNHHEKISPENITLILDQLLEGYDNRLRPGSGGSVTEVKTDIF
VTSFGPVSDVEMEFTMDMFFRQMWVDERLAFNGPIEILRLNNRMVDKIWTPDTFFHNSKK
SLAHNMTTPNKLFRIMQNGTVFYTMRLTVNAECPMMLTDFPMDGHICPLRFGSYAYTSSE
IVYTWRKGLEQSVVIPPESSNLLQYDLIGQTLFSKILKINTGQYSVKMVHFFLQRKLGYH
LIQTYIPLIMVVVLSQVSFWINKESVPARTVAGATTVLTMTTLSISARSSLPKVPYATAM
DWFIAVCFAFVASALVEFAAVNYFATLEANRMRRRLSRASVLESIAEGSDDEDESTISDT
STGERQRRRMNSVSEAPKMRLPIFLQQGSAIPPNITLAGPSVIDQYARMLFPLAFALFNI
IYWYIYLSKDTMEKSREMD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatattaggtttattatttttaaccagtattgggaatgtaataggaaaccac
catgagaagataagtccagaaaacatcaccctgattctggatcagcttcttgagggctac
gacaaccgactgaggcctggatcaggaggttctgtcactgaagtcaaaacagatatattt
gtcaccagttttggacccgtgtcagatgttgaaatggaattcaccatggacatgtttttc
cgtcaaatgtgggtggacgagaggctggcgtttaacggtcccatcgagatcctgcgctta
aacaatcgcatggtggacaagatttggactccagacaccttttttcacaactcgaagaaa
tccctggctcacaacatgacaacacctaacaagctcttccgcatcatgcagaacggcacg
gtcttctacaccatgaggctgactgtgaacgcagagtgtcccatgatgctgacggacttt
cccatggatggccatatttgtcctctacgcttcggaagctatgcctacaccagcagtgag
attgtttacacatggaggaaaggcctggagcagtctgtggtcatccctccagagtcctcc
aacttactgcagtacgacctcatcggacagacgctcttcagcaaaatactgaagatcaat
acaggccaatattctgtcaagatggttcatttcttcctccagaggaagctcggctatcat
ctgatccaaacgtatatccccctcatcatggtggttgtcctgtcccaagtgtcattctgg
atcaataaggagtccgtgcctgctcgcacagtggctggagcgaccactgtcctcaccatg
accacactgagcatcagcgcacgctcttccctgcccaaagtgccctatgccacagccatg
gactggttcattgccgtctgcttcgcctttgtggcctcggccctggtcgagtttgctgct
gtcaactactttgccacgctggaggccaacaggatgagacgtcgactctccagagcttct
gtgctggagtctatcgctgaggggagtgacgatgaagatgagtcgacgatatctgacaca
agcactggagagcgacaaagaaggaggatgaactcagtttcagaagctccaaaaatgcgc
ctgcccatcttcctgcagcagggttcagccatcccgcccaacattacgctggctggcccc
agtgtcattgaccagtacgctcgcatgctcttcccactcgcattcgccctctttaacatc
atctactggtacatctacctcagcaaggataccatggagaaatcgagggagatggactga
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