Pangasianodon hypophthalmus (striped catfish): 113529987
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Entry
113529987 CDS
T05759
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04260
Cardiac muscle contraction
phyp04261
Adrenergic signaling in cardiomyocytes
phyp04814
Motor proteins
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113529987 (tpm1)
04820 Cytoskeleton in muscle cells
113529987 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
113529987 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
113529987 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113529987 (tpm1)
04147 Exosome [BR:
phyp04147
]
113529987 (tpm1)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
113529987 (tpm1)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of microglial cells
113529987 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
ATG16
Crescentin
DUF3450
DUF745
TMF_DNA_bd
SlyX
ERM_helical
CENP-F_leu_zip
Lebercilin
DUF16
Fez1
Laminin_I
RasGAP_C
HrpB7
Motif
Other DBs
NCBI-GeneID:
113529987
NCBI-ProteinID:
XP_026775428
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELSEKKAADAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTE
ERAELSEGKCAELEEELKTVTNTLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERTVAKLEKTIDDLEDELYSQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattaagaagaagatgcagatgctcaagctcgacaaggagaacgccttggac
agagctgagcaggctgaatccgataagaaggcagcagaggacaggagcaagcagctcgag
gatgatttggtagctctgcagaagaaactgaagggcactgaggatgagttggacaagtat
tccgaggctcttaaagatgcccaggagaaactggagctgtctgagaagaaggccgcagat
gctgaggccgatgtagcctctcttaaccgacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtcttgccactgccctgcagaagctggaggaggctgagaaggctgct
gatgagagcgagagaggcatgaaggttattgagaacagggccctgaaggatgaggagaag
atggaaatccaggagatccagctgaaagaggccaagcacattgctgaggaagctgaccgc
aaatatgaggaggtggcccgtaagctggtgatcgttgagggtgagctggagcgtacagag
gagcgtgctgagctgtctgagggcaaatgcgctgagcttgaggaagagttgaaaactgtg
accaacaccctgaagtctctggaggcccaggctgagaagtactcacagaaggaagacaaa
tatgaagaggagatcaaggtcctcaccgacaagctgaaggaggctgagactcgtgccgag
ttcgctgagagaacagtagccaagcttgagaagaccattgatgacctggaagatgagttg
tattcccagaaactcaagtacaaagctatcagcgaggagctggaccacgctctcaacgac
atgacttcaatataa
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