KEGG   Pangasianodon hypophthalmus (striped catfish): 113529987
Entry
113529987         CDS       T05759                                 
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10373  tropomyosin 1
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04260  Cardiac muscle contraction
phyp04261  Adrenergic signaling in cardiomyocytes
phyp04814  Motor proteins
phyp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    113529987 (tpm1)
   04820 Cytoskeleton in muscle cells
    113529987 (tpm1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    113529987 (tpm1)
   04261 Adrenergic signaling in cardiomyocytes
    113529987 (tpm1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:phyp04812]
    113529987 (tpm1)
   04147 Exosome [BR:phyp04147]
    113529987 (tpm1)
Cytoskeleton proteins [BR:phyp04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     113529987 (tpm1)
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   113529987 (tpm1)
SSDB
Motif
Pfam: Tropomyosin CCDC39 CLZ CEP135_TSGA10_CC ATG16 HmpF CCDC170_1st Sec2p Rod_CreS DUF3450 Pex17 DUF745 FKBP15 ERM_helical SlyX CENP-F_leu_zip Lebercilin DUF16 SCD2_helical_N TMF_DNA_bd HAUS1 PUMA_CC LEKR1 CRWN_N Laminin_I TMP_N CC_Bre1
Other DBs
NCBI-GeneID: 113529987
NCBI-ProteinID: XP_026775428
LinkDB
Position
Unknown
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELSEKKAADAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTE
ERAELSEGKCAELEEELKTVTNTLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERTVAKLEKTIDDLEDELYSQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggatgccattaagaagaagatgcagatgctcaagctcgacaaggagaacgccttggac
agagctgagcaggctgaatccgataagaaggcagcagaggacaggagcaagcagctcgag
gatgatttggtagctctgcagaagaaactgaagggcactgaggatgagttggacaagtat
tccgaggctcttaaagatgcccaggagaaactggagctgtctgagaagaaggccgcagat
gctgaggccgatgtagcctctcttaaccgacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtcttgccactgccctgcagaagctggaggaggctgagaaggctgct
gatgagagcgagagaggcatgaaggttattgagaacagggccctgaaggatgaggagaag
atggaaatccaggagatccagctgaaagaggccaagcacattgctgaggaagctgaccgc
aaatatgaggaggtggcccgtaagctggtgatcgttgagggtgagctggagcgtacagag
gagcgtgctgagctgtctgagggcaaatgcgctgagcttgaggaagagttgaaaactgtg
accaacaccctgaagtctctggaggcccaggctgagaagtactcacagaaggaagacaaa
tatgaagaggagatcaaggtcctcaccgacaagctgaaggaggctgagactcgtgccgag
ttcgctgagagaacagtagccaagcttgagaagaccattgatgacctggaagatgagttg
tattcccagaaactcaagtacaaagctatcagcgaggagctggaccacgctctcaacgac
atgacttcaatataa

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