Pangasianodon hypophthalmus (striped catfish): 113530024
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Entry
113530024 CDS
T05759
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113530024 (rfwd3)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113530024 (rfwd3)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113530024 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
WD40_CDC20-Fz
zf-C3HC4
Beta-prop_THOC3
zf-RING_UBOX
Beta-prop_WDR3_1st
zf-rbx1
Beta-prop_EML_2
zf-C3HC4_2
EIF3I
zf-RING_5
WDR55
WD40
Beta-prop_WDR90_POC16_2nd
zf-RING_Vps41
zf-RING_11
Beta-prop_EML
zf-C3HC4_4
WD40_Prp19
WD40_WDHD1_1st
Rtf2
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
zf-ANAPC11
zf-UDP
WD40_2
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Myo5a
Motif
Other DBs
NCBI-GeneID:
113530024
NCBI-ProteinID:
XP_026775494
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MEDMEVDVQFGAAGPDGSVGLEVPIIIPDSGSSTEAEEDEEADRRPEGGSTAPANRPRLA
TTQIVRRRRARAGLRFQYSTQATHLNRGPLDFLLRVSTGSETEPLSGSTDEVSDSEEERQ
TREALGPVPAAEVPTILNSSQPASLVTPPLQQSSATEPTVSAEADRAEPLVQSEDRADSA
PAEATEGASLSAAVAENDEGEGETCSICFEPWTTSGEHRLATLRCGHLFGFTCIDRWLKG
QGAKCPQCNKKAKRADIVLLYAHKLRAVDNTEQENLKRALEQEQSLRRKAELESAQCRLQ
LQIVTDECGKLSRELQELRRLMAQTPSSSAQSQTSALSLSQRHESSSRGNYVFSKAVLVS
QAGGCRVLSYCESLSCLLASQPSPHASLVPGFGVKKISTVNLKASHYVPIHIKQIRGLAF
NRQQDGLLLSAAFDNTIKLTSLFTNTVVQAYNTGKPVWSCCWCHDNNNYIYAGLSNGSVR
VYDTRDTSAHVQELAPLRSSCPVVSLSYLPRAASSLFPCGGLIAGSLEGGCFWEQVDGTT
YRQHILPLESGGCTDIQVEPESRHCLVTYRPGRINPSLRCVLMELNRSPHQDSAQPPVCS
CSPVQTFTAGSSSKLLTKNAVFKSPATDSTLVCAGDEGSNSTMVWDASTGALLQKLPADI
PVMDICPFETNQEHYLASLTEKMIKIYKWEQSGSERVGF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatggaagtggatgtgcagtttggagcagcaggaccagatggttctgttggt
ctagaagttcccatcatcatccctgactctgggagcagcacagaagcagaagaggatgaa
gaggctgataggagacctgaaggaggaagcacggctcctgctaacaggccacggctcgca
acaactcaaattgtcaggagaaggagggctagagcaggtctgcggttccagtactccaca
caggctacacatttgaacagaggccctttagactttctgcttagggtgtcaacaggaagt
gagacagagcctctctcaggcagcacagacgaggtgagcgactctgaggaggaaagacag
actagagaggccttgggtccagtacctgctgcagaggttccaacgatactgaacagcagc
cagcctgcttctctggtcacccctcctcttcaacagtccagtgcaacagagcctactgtt
tctgctgaagctgacagggctgaacctctagttcagtctgaggacagggctgattcagca
cccgcagaggccactgaaggtgcttctctctcggctgctgtggctgagaatgatgaaggg
gagggagagacctgttctatatgtttcgaaccttggaccacgtctggtgaacaccgtcta
gccacgttgcgatgtggccacttgttcggcttcacctgtattgaccgctggctgaagggc
caaggagccaaatgcccccagtgcaataagaaggccaagcgggctgatatagtcttgttg
tatgcacataaactgagggcagtggacaacacagaacaggagaatttaaagagagctttg
gaacaggagcagagtttgcggaggaaggcagagctggaatctgctcagtgtcgtcttcag
ttacagattgttacagacgagtgtgggaaactcagccgagagcttcaggagctgaggagg
ttaatggcacagactccctccagctcggctcagtctcagacctctgccctgtctctgtct
cagagacatgaatcctcaagcaggggaaattatgttttctccaaggcagtccttgtttct
caggctggtgggtgtcgtgtgctgtcttactgtgagtccctcagttgcctgttggcttct
caaccctcccctcatgcctctctggtccctggatttggggtgaaaaaaatcagcactgtg
aatctcaaagccagtcattatgttcccatccacattaaacagatcagaggccttgccttc
aacagacagcaagatggccttctgctttctgctgccttcgataatactatcaagctcacc
agcttgtttactaacactgtggtacaggcctacaacactgggaaacctgtgtggagctgc
tgttggtgccacgacaacaacaactacatttatgctggtctgagcaacggctcggtacgg
gtatacgacacgcgggacacaagcgctcatgtgcaggagctcgcacctcttcgctccagt
tgtccagttgtatccctgtcctacctcccccgtgccgcctccagtttgttcccatgtggt
ggcctcatcgcgggctcccttgagggaggatgtttctgggagcaggtggatggaaccacc
tatcgacagcacattctgcctttagagtctggaggctgcacagacattcaggtggaacct
gagagcagacattgtctggtcacctacagaccgggtcgcatcaacccatctttgcgttgt
gttctgatggagcttaaccgaagccctcatcaggactctgcccagcctcctgtctgctcc
tgttctcctgtccagaccttcactgctggctcttcttccaagctgctcacaaagaatgcc
gtgttcaagagtcctgctactgactccactctggtgtgtgcaggagatgagggctctaat
tctaccatggtgtgggatgctagtactggagccttgcttcagaaacttcctgcagacata
ccagtcatggacatctgcccttttgagacgaaccaggaacactacctggcttctctaact
gagaagatgattaagatctataaatgggagcagagtggctcagaaagagtgggtttctga
DBGET
integrated database retrieval system
