Pangasianodon hypophthalmus (striped catfish): 113530063
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Entry
113530063 CDS
T05759
Name
(RefSeq) very long-chain acyl-CoA synthetase-like
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03320
PPAR signaling pathway
phyp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113530063
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
113530063
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phyp01004
]
113530063
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113530063
Enzymes [BR:
phyp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
113530063
Lipid biosynthesis proteins [BR:
phyp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
113530063
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
113530063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
113530063
NCBI-ProteinID:
XP_026775571
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MAMYVCFTFLVAGLCVLPALLWTLCPYLLQDCAYMLNAVRFGLRLERYKRRARFYSILDC
FLDAVRKHPHKPFIHFMGETHSYSDVDRESNKVAHALQKVAGLKEGDVVALFIGNEPCFI
WLWLGLAKLGCASALLNFNIRSKSLLHCFSCCGANVLIVSEELCGAIEEVLPALKEKSIS
VYVLSDACSTDGIKGISQAITQAPDEALSPSLRANVKFHSTALYIYTSGTTGLPKAAMVT
HERVWAASFIQAVSGVTSEDVFYLNLPLYHSAGFLIGFTGCIERGNTLVLRRKFSASQFW
DDCRKYNVTVMQYIGETMRYLCSTPKRDNDRDHKVKIAIGNGVRADVWNEFLNRFGNIYV
RELYAATEGNIGFINYTTKVGVVGRVNFLHKKLFPHSLIKFDIEKEEPVRNADGLCVPAA
RGEPGLLVGKITIKSPFVGYAGNKQQTERKRLRNVFVEGDLYFNSGDLLKIDHENFVYFQ
DRVGDTFRWKGENVATTEVSDILTMVDCIEEANVYGVMVKGHEGRIGMAAVVLKEGKEFD
GIDTCRVLANYLPVYARPRFIRIQSSLELTGTFKMKKVKLVEEGFDPALIRDPLYFLDLV
EKKYVALTQEMYNSVIAGDIKL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtacgtgtgctttactttccttgtggctgggctgtgtgtgctgcctgctttg
ctgtggacactgtgtccatacctgctccaggactgcgcctacatgctgaacgctgtgcgc
ttcggactgcgcctggagcgctacaagaggagagctcgcttctacagcattctcgactgt
tttctggatgccgtgaggaaacatccacacaaacccttcatccacttcatgggagagacg
cactcgtactcagacgtggacagagagagtaataaagtggctcatgctttgcagaaggtg
gctggactgaaggagggtgacgttgtggccttgttcataggcaatgagccttgttttatc
tggctctggctgggcctggctaaactcggctgtgcctctgctttactcaactttaacatc
agatccaaatctcttctgcactgcttctcctgctgtggtgcaaacgtgctcatagtgagc
gaagagctctgcggtgccattgaagaagttttgcctgctttgaaagagaagagcatcagc
gtgtatgtgctctctgatgcatgcagcacagatggcattaagggcatctctcaggccatc
acacaggcgcctgacgaagcgctgtctccatcactcagggctaatgttaaattccacagc
acagcgctatatatctacacatctggaaccaccggtctgcctaaagcagccatggtgact
catgagagagtctgggctgcttcattcatccaggctgtttctggggtcacatctgaagac
gtgttttacctcaacctgcctctgtaccacagcgctggcttcctcataggattcaccggc
tgtattgagagagggaatactttagttctgcggaggaaattttctgcctctcagttctgg
gacgactgcaggaagtataatgttacagtgatgcagtacattggagaaacaatgcgttac
ctctgcagtacaccaaagagagataatgaccgagaccacaaagtgaagattgctataggt
aacggtgtacgagccgacgtgtggaatgaatttttgaatcgctttgggaatatttacgtc
agggagctctacgctgccacagagggaaacatcgggtttattaactacaccactaaggtt
ggagtggtaggccgtgttaacttcctccacaagaaattgttcccccattccctgatcaag
ttcgacatcgagaaagaggagcctgtgaggaatgcagacggactttgtgtgccagcagct
cgaggtgagcctggactgctggttgggaaaatcaccattaagtctccatttgttggttac
gctggaaacaagcagcagacagaaaggaaaagactcagaaatgtgtttgttgaaggcgat
ctctatttcaacagcggtgacttgctgaaaatcgaccatgaaaacttcgtctactttcag
gatcgggttggagacactttcagatggaaaggtgaaaacgtagccacaactgaagtatca
gatattctgactatggtggactgcattgaggaagcaaacgtctatggcgtcatggtcaaa
gggcacgaagggaggattggaatggcggctgttgtgttgaaagaagggaaggagtttgat
ggcattgacacatgtagagttttagctaactacctaccagtttatgccagacctcgtttc
attcgcattcagagttctttggaactcacaggaactttcaagatgaaaaaggtgaagctg
gtggaggagggctttgatccagcgctcattcgcgacccactctacttccttgatctagtt
gaaaagaaatacgttgctctcactcaggaaatgtataattcagtgattgcaggagacatt
aaactataa
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