Pangasianodon hypophthalmus (striped catfish): 113530109
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Entry
113530109 CDS
T05759
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022
Basal transcription factors
phyp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113530109 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
113530109 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113530109 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113530109 (gtf2h1)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113530109 (gtf2h1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113530109 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
113530109
NCBI-ProteinID:
XP_026775664
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MAALSEEVLLVVKRVRQRKQDGTLYLMTERIAWGPEGKDRFTVSHPYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFANESTALKDRDAAKDLLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLKLSSVDHSISNNNKQEVGISAAFLADIRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKQKYAENVPHSMTEKEFWTRFFQSHYFHRDRISTGQQ
DIFSECAKQDEKGLKSMVVQGVKNPMVDLQSFEDKMLDEGYGSLTVPSTSNSSKTVKENS
NSAIIKRFNHHSAMVLAAGLRKVEAPTDQASETSGTDGNSRDSDCFQPPVKKVKLQEAIE
YEDLENESGPKTIALNLKKSDRYSHGPVPLQSQHYSTSQDIISSISYIKEEMSCYKPCLT
QVMSSSVASSAITALSPGGVLMQAGPQQTISQLVPSDVQSELKHLYTAAGELLRHFWSCF
PVNTPFLEEKVVKMQSNLERFQSTKLHPFQEKIQREYLSTNLTSHLEEMIQSAYNKFHAW
QTRRMTRKT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctgtcggaggaggtgctgctggtggtgaagagggtccggcagagaaaacag
gatggtacgctttacctgatgaccgagcgcatagcttggggcccagaaggaaaagatcgc
ttcaccgtcagccacccgtacgccgacatccgttgtcagaagatcagtccagatggcaaa
gcaaagatccagcttcagttggtattacacacaggagagagcaccaccttccactttgct
aatgaaagcacggctctgaaggaccgggatgctgccaaagacctgctgcagcagctcctg
cccaagtttaaaaagaaagctaacaaagaactagaggagaaaaacaggatgctgcaggag
gatccagtactatttcagctctataaagacctggtagtgagtcaggttatcagtgcagaa
gaattttgggccaatcggctgaaattgagctctgtagatcactccatatccaataacaac
aagcaggaagtgggaatatcagcagctttcctggcagacattagaccacagactgatggc
tgtaatggcctgagatacaacctgacctctgacatcatcgaatcaatcttcagaacatac
cctgcagtcaaacagaaatatgctgaaaatgtgcctcacagcatgacggaaaaagagttc
tggacacgcttcttccagtcacactacttccacagagatcgcattagcactggccagcag
gatatcttttctgaatgtgccaaacaggatgagaagggtttaaagtccatggttgttcaa
ggtgttaagaaccccatggtggatctgcagtccttcgaggataaaatgttagatgagggc
tatggctccttaacggttccctccacatccaactccagtaaaacggtaaaagagaatagc
aactcggccatcattaaacgcttcaaccaccacagtgccatggtgctggcagctggccta
cgcaaagtggaagcacccactgaccaggccagtgagacaagcggcacagatgggaattcc
agagactcagattgctttcagccaccagttaaaaaggtgaaattgcaagaggctattgag
tacgaagacctggagaatgaatctgggcctaaaacaattgctttgaatcttaagaagtct
gacaggtattcccacggtccagttcccctacagtcccaacattactccacaagtcaggac
atcatcagctcgatcagctacattaaggaggagatgagctgctacaaaccctgccttact
caggtgatgtccagcagtgtagctagttcggccattacagccctttcacctgggggagtt
ttaatgcaagctggaccccaacagaccatcagtcagttggtacccagtgatgttcagagt
gaactaaagcacttgtacacagcagcaggggagctgctacggcacttctggtcctgtttt
ccagtcaacacacccttcctggaggagaaggtggttaagatgcagtccaatctggagaga
ttccagtcaaccaagctccatccattccaagagaagatccagcgggaatacttaagtacc
aatctgactagccatctagaagagatgatccagtctgcctataacaagttccatgcttgg
cagactcgccgtatgacgaggaaaacctga
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integrated database retrieval system
