Pangasianodon hypophthalmus (striped catfish): 113530123
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Entry
113530123 CDS
T05759
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113530123 (pus7)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
113530123 (pus7)
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113530123 (pus7)
Prokaryotic type
113530123 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
113530123
NCBI-ProteinID:
XP_026775688
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MLIAALRPIRLVWIRTVTLCPYPSGVSLFPNLSRSLQKSHHKQKIFPALQQFSSWSRFVP
MEDKEASTNLIHLGEKRGCPEEDSEHTAKKARLEDEANGSHVTKQTEEDKEEMEAEEGGE
EESLEDEDGEGESFADMMKHGLSEVDVGIHKFVSDHKGFSGILKERYSDFVVHEISKEGK
IVGLDDLSIPVETEEASAETEPVECQDLTEEQKQQLADLQLFKNKEGNVAIEVEGDSKER
RTLLHKAIKALYPGLETKTEEREGKRFIVAYHAAGKKALAEVRTAAAPRKHSWPKNRGSF
CHFVLYKENKDTMDAINVLSKFLRVRPNVFSYMGTKDKRAITVQEIAVLKISAERLAHLN
KCLMNFKLGNFSYKKHPLKLGELQGNHFTVVLRNISGSDEQVEQAMTSLRDTGFINYYGM
QRFGTTAVPTHQVGRAILQNNWTEVMDLILKPRPGAEKGYLVKCREEWAQTQDPEAALKK
LPVKRCVEGQLLRGLSKYGKKNIITAFGMIPRNNRLMYIHSYQSFVWNTMVSRRVEAYGL
KAVEGDLILKGGTAHILSAEEVDKHSIHDIVMPLPGFDVIYPTHKVGKGYRDMLAADNLD
IDNMRHKVRDYSLAGAYRRILICPSDVSWELIHYDDPRVPLVHTDVEKLENKPAPVFLTE
GKYKALKMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTVWLN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgctgatagcggcactgcggccaataagactggtgtggatcagaactgtcactctgtgt
ccttatccttcaggagtgagccttttccctaacctgtcaaggagtcttcaaaaatctcat
cataagcaaaagatttttcctgctctccaacagttttcctcctggagcagatttgtgcca
atggaggacaaggaggcttcaacaaacctgattcatcttggggagaagcgagggtgccct
gaggaggactcggaacatactgctaagaaagcccgacttgaggatgaagcaaatggcagc
catgtcaccaaacaaacagaggaagacaaagaagagatggaggcagaggagggtggggaa
gaggagtctttggaggatgaagatggagaaggagagagctttgctgatatgatgaaacat
ggtctcagtgaagtggatgtaggaatccataagtttgtcagtgatcataaaggattctct
ggaatcttgaaagagaggtactctgattttgtggttcatgagattagcaaggaggggaag
atcgtgggcctagacgacctctccatacctgtagaaacagaggaagcgtctgcagagact
gagccagtagagtgtcaggacctgacagaagagcaaaaacaacagcttgctgatctgcag
ctattcaaaaacaaagagggaaatgtggctattgaggtggaaggagattccaaggagagg
cgtactttgcttcataaagcaatcaaagccctatacccaggactggagaccaaaactgag
gaaagagagggcaagaggttcatagtggcatatcacgcggctgggaaaaaagcactagca
gaagttcgaacagctgcagcaccaagaaaacactcatggcctaagaaccgtggcagcttt
tgccattttgtgctttacaaggagaataaagacaccatggatgccatcaacgttctctcc
aaatttctcagagtccgacccaatgtcttctcctacatgggcacaaaagacaagagagcc
atcacagtgcaagagattgctgtgttaaaaatcagtgcagaacgattggctcacctcaat
aagtgcctgatgaacttcaaactgggaaacttcagctataaaaagcaccctctgaaactg
ggggagctgcaggggaaccatttcacagtggtactcaggaacatctcaggctctgatgag
caggtggaacaggccatgacatcactcagggacacgggctttatcaactactacggcatg
cagcgctttggcaccacagctgtacccacacaccaggttggcagagccatcctgcagaac
aactggactgaagtgatggacctgatcctaaagccacggcctggggcggagaagggctat
ctggtgaagtgtagagaggaatgggcccagacacaggatcctgaagcagccctgaagaag
ctgccagtgaaacgctgtgtagagggacagctcctgaggggcttgtcaaagtacggcaaa
aaaaacatcattacagctttcggaatgatccctcgcaacaacaggctcatgtatatccac
agctaccagagctttgtgtggaacaccatggtcagcaggagagtggaagcctatggcctt
aaagctgtggaaggagacctaatactcaaaggaggcactgctcacatcctatctgcagag
gaagttgataagcactccattcatgatattgtgatgccactacctggatttgatgtcatc
tatcccacacacaaggtggggaaaggctacagagacatgctggcagccgataatctggac
attgataacatgaggcataaagtacgagattattcactggctggagcctaccgccgtatc
ctcatatgcccaagtgatgtcagctgggagctgattcattatgatgaccccagagtgcct
ctggtccacacggatgtagagaaattggaaaacaaaccagcaccagtttttctgacagag
ggtaaatacaaggctctgaagatggagttctccctccctccatctacctacgccaccatg
gccatcagagaagtgcttaaaatggacaccagcatcaagaaccagacgcagcttaacact
gtgtggctgaactga
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