Pangasianodon hypophthalmus (striped catfish): 113530205
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Entry
113530205 CDS
T05759
Name
(RefSeq) integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
phyp04518
Integrin signaling
phyp04810
Regulation of actin cytoskeleton
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113530205
04518 Integrin signaling
113530205
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113530205
09142 Cell motility
04820 Cytoskeleton in muscle cells
113530205
04810 Regulation of actin cytoskeleton
113530205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113530205
Cell adhesion molecules [BR:
phyp04515
]
Integrins
Integrin alpha subunits
113530205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
FG-GAP_2
Integrin_A_Ig_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
113530205
NCBI-ProteinID:
XP_026775845
LinkDB
All DBs
Position
Unknown
AA seq
1196 aa
AA seq
DB search
MRARTHTHLCMAALMEYYLIILLSIWFLLPGSRNCFSIDTKKAQIIQGPKETQFGYTVQQ
HEALGQKWLLVGAPFEKNGEKETGDVYKCPLDSSTKTNCSRLNLGGTTLKNVFEHKDKMR
LGMSLTSNLKDNSFVACGPLWSYECGTSLYSTGICSSVDSTFNFSHSIAPAFQRCETYMD
IVIVLDGSNSIYPWFDVQDFLINILQKFSIGPGQIQVGVVQYGERVVHEFYLDDFHTVDE
VVSAAQNIIQRGGEETRTALGINVARSQAFKRGGRPDARKVMIVITDGESHDSPDLKKAV
EESEKDNITLYGIAVLGYYNRRGINPEAFLREIKFIATDPEEHFFSVTDEAALKDIVDAL
GEKIFSLEGTSQNGTGFGLQMSQAGFSSHIVEDGVLVGAVGAYEWNGAVLKQTQYGSVIP
PKSSYLKEFPEELKNHGAYLGYVVSSIVSAHYGQLYVAGAPRYNHTGKMIIFTLTNTGNL
TILHSQTGQQIGSYYGSELTPLDQDDDGLTDLLLVAAPMYFSRGWETGRIYIYRLDDQGH
VNLEGFLEPSVWAHNSRFGSAMSSMPDLNGDGYGELVVGAPLEDDHGGAIYLFYSRHSGI
QPKYKQRIAAADISPGLQYFGRSVHGVMDINGDGLTDLSVGAFGAAVLLWSRSVVRVYLD
VHFEPSKINVFNKDCVRGGKEVTCMAAMVCTTVKARTPMPDTQRVALKQSWAFDERRYSP
RAVLDNTEGQPSANITVLADTPHCEHIYFHVHETADYTRPVVFNVDVKLQNLDEGPVLDD
GWSTSLRLELPFWNGCEEDDRCAPNLMLQSSTDLLDRRQFCARRECATCPLCALEGARVN
TERVVETSRRRVLVEVRLENRGENAYNTQLHISHSANLQFSNLMVKTPPDIEIKCEAAER
LSLQRNCNVSAPLMRSLAQVTFRLELEFSRSVFMDYMQVLLKASSNGEEVTPEDNINNIH
HPLKHEADILFTRDSSPVRFEIKSAPNLEYVGATGLTFNLSYQLQNLGLFPVTHLLLTVD
VFSVTKNGNNLLYISDINVDQNSGSQCTVPHVTETDVPSDEDLSLTPQLNSSTAVAFSAQ
CRLMLLPHQDVSVIVAGSLNLHTLQKINFKALELVIMAAIELSPNNPVFLHEERPTRHII
LEIRKDEDYKIPIWIIIGSTLGGLQLLALLVLALWKLGFFDRERQREEDEKTTEQR
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcacgcactcacactcacctatgcatggctgcacttatggagtattatctcatc
atactactttccatctggttcctgctcccagggagcagaaactgcttcagtattgacaca
aagaaagcccagatcatccaaggaccaaaagaaacacagtttggctacacagtgcagcaa
cacgaggcacttggtcagaaatggctccttgtgggagctccatttgagaagaatggtgaa
aaggagaccggtgatgtgtataaatgcccgctggatagctcgactaagacaaactgttca
cgcctcaacttgggagggacaaccctaaaaaatgtatttgaacacaaggacaaaatgaga
ctagggatgtccctaacctccaacttaaaggataacagttttgtggcttgcgggccatta
tggtcgtacgaatgtggtacatccttatacagtacagggatctgctccagtgttgacagc
acttttaacttctcacacagcattgcacctgcctttcagagatgtgaaacatatatggat
atagtcatagtgctggatggatcaaactctatatacccctggtttgatgtgcaggacttc
ctaatcaacatcctccagaagttttctattggtccaggacagattcaggttggagtggtg
cagtatggagagagagtggtgcatgagttctatctggatgacttccacaccgttgatgaa
gtggtgagtgcagcacagaatattatccaacgtggaggagaggagactcgcacagcactt
gggatcaatgttgcacgttcccaggcatttaagcgtggagggcgtccagatgccaggaaa
gttatgattgtgataactgacggagaatcacatgatagcccagacctaaaaaaggctgtt
gaagagagtgagaaagacaacatcacactgtatggaatcgctgtgcttggctactacaat
cgacgtgggatcaaccctgaagcgttcttgagagagatcaaattcattgccactgaccct
gaggagcatttcttcagtgtgacagatgaagctgctctgaaggacattgtggatgccttg
ggagagaaaatcttcagcctggagggtacaagtcagaatggaactggctttggactacag
atgtcgcaggcaggtttttcctcacacattgtggaggatggtgttctggtaggtgctgta
ggggcttatgagtggaatggcgctgtcctcaaacagacacagtatggcagtgtgatccct
cccaagtcatcataccttaaagagtttcctgaggagctgaagaaccacggagcttacctg
ggttatgtggtgtcctcaatagtgtcagctcattatggccagctttatgtggcaggagct
cctcggtataaccacacaggcaaaatgatcatcttcacccttaccaacacaggcaacctc
actatactgcactctcaaacaggacaacagattggctcatattatggtagtgagttaact
ccactagatcaggatgacgatggattgactgatctgcttctggtggctgctcctatgtac
ttcagcagaggctgggaaacaggcagaatctacatctacagattggacgatcagggacat
gttaacctggagggttttcttgagccatcagtttgggctcataactctcgttttggctca
gccatgtcctccatgcctgatctcaatggtgatggttatggtgaactggtggtaggtgcc
cctctagaggatgatcatggtggtgcaatctacctcttctacagccggcacagtggtatt
cagccaaagtataagcagagaatagcggctgcagacatatccccaggcctgcagtatttt
ggtcgtagtgtccatggtgtaatggacataaatggagatggactgactgatttgtctgta
ggtgcttttggtgctgccgtcttactctggtctcgcagcgtggtccgtgtgtaccttgat
gttcactttgagccatcgaagataaatgtgttcaacaaagactgtgtgcgaggaggcaaa
gaggtgacctgcatggcagccatggtctgtaccacggtaaaggcacgaacccctatgcca
gacacacaaagagtggctctcaaacagagctgggcttttgatgagagacgctacagcccc
agagcagtgctggataacactgaaggacagccttctgcaaatatcactgtcctagcagat
acaccgcactgtgagcacatctacttccatgtgcatgaaactgctgattacactcggcca
gtagtattcaatgtggatgtgaaactgcagaaccttgatgaaggccctgtgctggatgat
ggctggtccacctcactgcgtttagagctgcccttctggaatgggtgtgaggaagacgat
cgatgtgcgcccaacttgatgctacagagcagcactgacctactggaccgtagacagttc
tgtgctcggagagagtgtgctacatgcccactgtgtgccctggaaggagcgagggtgaac
actgaacgtgtggtggaaaccagcaggagaagagtgctggtggaggttcgactggagaat
agaggagaaaatgcctacaacacacagctacacatttctcactcagcgaacctgcaattc
tccaacctgatggtgaagactcctcctgatatagaaatcaagtgtgaggcagcagaaaga
ctaagtctacagaggaactgcaatgtcagtgctccactgatgcggtctcttgctcaggtg
accttccgtttggaattggagtttagcagatcagtctttatggattacatgcaagttttg
ctaaaggcctccagcaatggtgaagaggtgactccagaagacaacatcaataatatacat
catcctttaaagcatgaggctgatatcctctttacaagggattccagccctgttcgcttt
gaaattaaatctgcgcctaatctagagtatgtaggagctaccggacttaccttcaatctg
tcttatcagctccagaacctcggtctgttccctgttactcacctgctcctcacagtagat
gtgttttctgtgactaaaaatggcaataatcttctgtacatctcagatataaatgttgat
cagaattctggttctcagtgcacagttccacatgtcactgagacagatgtgccctcagat
gaagacctctcgctcacaccacagctgaattcgtcgactgctgtagctttttctgcacag
tgcaggctcatgcttctaccccatcaagacgtcagtgtgattgtggcaggatcgctaaac
ctccacacactacagaaaataaacttcaaggctttggagttggtgataatggcagccatc
gagttgagcccaaacaaccctgtgttcctgcatgaggaaaggcctacaagacatataatt
ctggagattagaaaggatgaagattacaaaattcccatctggattataatcggaagcact
ctgggaggcctacagcttttggctctgcttgtactagctctctggaagctgggattcttt
gacagggagagacaacgtgaagaagacgagaagaccacagagcagcggtaa
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integrated database retrieval system
