Pangasianodon hypophthalmus (striped catfish): 113530285
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Entry
113530285 CDS
T05759
Symbol
rere
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113530285 (rere)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
113530285 (rere)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
GATA
Myb_DNA-binding
DUF7952
CCDC47
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
113530285
NCBI-ProteinID:
XP_026775927
LinkDB
All DBs
Position
Unknown
AA seq
1518 aa
AA seq
DB search
MTADKEKDKERERDRERDRREKARESESSRPRRSCTLEGGAKNYAESEHSEDEENEAAGG
TAAPEEATKKSKKKLPKKKSRYERTETGEITSFVTEDDVIYRPGDCVYIESRRPNTPYFI
CSIQDFKLSKRDHLLMSVKWYYRQSEVPDSVYQHLVQDRNNENDSGRELVITDPVVKSRE
LFISDYVDTYHTAALRGKCNIAHFSDIFAAREFKPRIDSFFYILGYNPETRRLNSTQGEI
RVGPSHQAKLPELQPFPSPGGQVTENEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGG
STEDGCLAASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPKLIEKCWSEDEVKRFIKG
LRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQPVFRRIKTRTA
TTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKDWHHGGRENIL
LCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEEDGLGGKHSMRTRRNRGPMSTLRSG
RKKQTASPDGRASPTNEDLRSSGRTSPSAASTSSTDSKMDSVKKPSKKIKEEAPSPMKSA
KRQREKGSSDTEEHERASAKKSKTQELNRPDSPSECEGEGEVESSDGRSVNDEGSDPKDI
DQDNRSSSPSIPSPRDNESDSDSSAQQQVLQGQHPPVIQCQTGTLPPAPPSSTAPTPPTS
SAAPLPSQVSPSVPTTPIPPQQIASAGPLSHIQSGAALHPPRLPSPHSPLQTIPQPPVPS
QSGPQALQPQLHGPMPPMGHPLQAGPHMPHASLPPQNFPLTQSQVPPSPMSAQAQASSLS
QQQQQPPPHTPPSQSSSSSGTQPPREQPLPPAPMSMPHIKPPPTTPIPQMQNPQTHKHPP
HLSAPQFPQKPPNLPPLPALKPLSSLSTHHPPSAHPPPLQPMPQPPAAQPPVLTQSQNHV
PPAAPPLPSPSTAPSHSASSQPTFPPHPYIPGASAALPPSSVPSSVAGPLAALQQPPSSI
SMPLPASISAPCSGPSTVPAVQIKEEPLDEAEEPESPPPPQRSPSPEPTIVNTPSHASQS
ARFYKYLDRGYNTCARTDFYFTPLPSSKLAKKREEALEKAKREAEQRAREEKEKEREREK
EREREREREKEAERAAKASSSSHEGRLGDPPMAGPAHMRPPFDATPATIATVPPYIGPDT
PALRTLSEYARPHVMSPTNRNHPFFMPLNPAEPLLAYHMPGLYNADPAMRERELREREIR
EREIRERELRMKPGFEVKPADLDNLHPSANPMEHFARHGPIGLPHMAGHPFASFHPGLNP
LERERLALANPQLRPEMSYPERLAAERLHAERIANDPIARLQMFNVTPHHHQHSHIHSHL
HLHQQDPLHQGGGECLVCPPGSGAHPLVDPLAAGPHLTRFPYPPGAIPNPLLGQPPHEHE
MLRHPVFGTSYPRELPGGLPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHHHMHGGPL
PGQEDYYSRLKKESDKQL
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgacaaagagaaggacaaggagcgggagcgcgaccgagagcgtgaccggaga
gagaaggcgcgcgagagtgagagctcgaggccacgccgcagctgcacactggagggcggt
gccaagaactatgccgagagtgaacacagcgaggatgaggagaatgaggcggccggaggc
acggccgctcctgaggaagccactaagaaaagcaagaagaagctgccgaagaagaagtca
cgctacgagcgcacagagaccggcgagatcacgtccttcgtcacagaggacgacgtcatc
tacaggcctggcgattgtgtgtacatagagagccggcggcccaacacaccctacttcatc
tgtagcattcaggactttaagctgagtaaacgggaccatctgttaatgagtgtgaaatgg
tactaccgccagtccgaggtacccgactctgtctaccagcacctagtacaggaccgcaac
aatgagaacgactcgggtcgggaactggtcattactgaccctgtagtaaaaagcagagag
ctcttcatctcggactatgtggacacgtaccatacagcggcccttagagggaaatgtaac
atcgctcacttctctgacattttcgctgccagggagttcaaaccacgaatcgactccttc
ttctacattttaggatataacccagagactaggcgattaaacagcacccaaggggagatt
cgagtaggtcccagtcaccaggccaagctcccagagctgcagcctttcccctctcctgga
ggccaagtgaccgaaaatgaggagctggtgtggatgccaggggtcaacgactgtgacctg
ctcatgtacctgcgggcagccaggagcatggcagcgtttgcagggatgtgtgatggaggc
tcgacggaggacgggtgcctggctgcctcacgcgacgacactacactcaatgcattaaac
actcttcacgaaagcagctacgatgctgggaaagcactgcagcgtctggtaaagaagccc
gtccccaagctaattgagaagtgctggtccgaggatgaagtgaaacggttcataaaagga
ctgagacagtacggcaaaaacttcttcaggattcggaaagagctgctaccaaacaaggaa
acaggagagttgataactttttactattactggaagaaaacccctgaggctgctagctcc
cgagcccaccgcagacaccgaaggcagcctgtcttccgtcggatcaagacccgcacagca
accacgcctgtcaacactccctcccgaccgccttccagcgagttcttggacctgagctca
gccagtgaagatgactttgacagtgaagacagtgaacaggagctgaaaggctacgcctgc
cgccactgttttaccaccacctccaaggactggcaccacggaggccgagagaatatccta
ctgtgcaccgactgccgcattcatttcaagaaatacggtgagctgcccccaattgagaag
cctgtggacccaccaccgtttatgttcaaacccgtcaaagaggaagaggatgggctcggc
gggaagcatagcatgaggactcgacggaaccgcgggccgatgtcgacactacgaagtggc
cggaagaagcagacagccagccctgatggcagagcctcaccaaccaatgaggacctacgc
tcaagtggccgtacctcacccagcgcagccagcacgtccagtactgacagcaagatggac
tctgtgaaaaaacccagcaagaagataaaggaggaggcaccatcgcctatgaagagtgcc
aaacgccagagagagaagggatcctcagacacagaggagcatgaaagggccagtgctaag
aagtcaaagactcaggagttgaatcggcctgattcaccctcagaatgtgagggagagggc
gaggtagaaagttcggatggccgcagcgtaaatgacgagggcagcgaccccaaggacatt
gaccaggacaaccgcagctcgtctcccagcattccaagcccgcgtgacaacgagagtgac
tcagattcatcagcgcaacagcaggtcctccagggccagcaccctccagtaatccagtgc
cagacaggcactttgccccctgcaccgccttcctccacagcgcctacgcccccaacgtca
agtgcagccccacttccttcacaagtgtctccatctgtgcccaccacccccatccctcca
cagcagattgcttcagcaggcccgctttctcacattcagtccggagcagcacttcatcct
ccgaggttgccttctcctcactcacccttgcagaccatccctcagcctcctgtgccctct
cagagtggcccacaggctctacagcctcagctgcatggccccatgcctccaatgggccat
cctctgcaggcagggcctcacatgcctcatgcttccttacctccacagaatttccctctc
actcagtctcaggtccccccttcccccatgtcagcccaggcacaggcctcctcactatcc
cagcagcagcagcaaccacctcctcacactcctccatcacagtcctcatcttccagtggc
actcagcccccacgagagcagcccttgcctcctgctcccatgtccatgcctcacataaag
cctccacccaccacccccatcccacagatgcaaaaccctcagacacacaaacatcctcca
cacttgtcagctccacagttcccccagaagccacccaacctgcccccgctacctgccctg
aagcccctaagttccctttctacgcaccatccgccctctgcccacccacccccattacag
cccatgcctcaacctccggccgcccagcctcccgtgctcacacagtcccaaaaccatgtg
cctcctgcagctccaccactcccctcaccctcaaccgctccctcacactctgcatcttcg
cagccaaccttccctcctcatccctatatcccaggagcctcagctgctcttccgccctcc
tctgttccttcttctgtggcaggacccctggctgcactgcagcagcccccctcatccatc
tccatgcccctgcctgcttccatcagtgcgccctgctcaggtccctccaccgtgcccgcc
gtgcagattaaagaggagcctctggatgaggccgaggagccagagagcccaccacctcca
cagaggagtccttcaccagagcccaccatcgtcaacacacccagtcatgccagccagtct
gcacggttctataagtaccttgaccgaggctacaacacgtgtgcaagaactgatttctac
tttactccactgccatcatccaagctggctaagaaacgtgaggaagcactggagaaagca
aagagggaagcagagcagagagcacgggaggagaaagaaaaagagagggaacgggaaaaa
gagagggaaagagaacgtgaacgggagaaagaggcagaacgagctgcgaaggcatccagt
tcttctcacgaaggcagactgggtgatcctccaatggctgggccagctcacatgcggcca
ccctttgacgccactccagccaccattgctactgtaccaccctatattggcccggacacg
ccagccctgcgcacgctaagcgagtatgctcgaccccatgtcatgtcacccaccaaccgg
aaccacccattctttatgcctctaaacccagctgagcctttgctggcctaccacatgccg
ggattgtacaatgccgaccctgcaatgcgtgagcgtgagctgagagaacgcgagatccgt
gagcgtgagatccgtgaaagggaactaaggatgaaaccaggctttgaggtcaaaccagcc
gacctggacaacctgcacccctcagccaaccccatggagcactttgcccgtcatggcccc
attggattaccccacatggcaggccacccgttcgcgtctttccacccaggactgaaccct
ctggagcgtgagcgcctggccctggccaacccccaactgcggcctgagatgtcctacccg
gagcggctggctgccgagcgtctgcatgccgagaggatagccaacgaccccatcgcccgg
ctgcaaatgttcaacgtgacaccgcatcatcaccagcactcgcacatccattcgcacctc
cacctgcaccagcaggacccactgcaccaaggtggtggtgaatgtcttgtgtgtccacca
ggttctggggcccatccgcttgttgaccccctggctgctggaccccacctgacccgcttc
ccgtacccgcccggagccatcccaaacccgctgcttggccagcccccacacgagcacgag
atgctgcggcaccctgtattcggtacttcataccctagagaattgcctggcggtttgcct
ccacctatgtcagcagcgcaccagttgcaggctatgcacgctcagtctgcagagctgcag
agactggccatggagcagcagtggcttcacggccaccaccacatgcacggaggccctctg
cctggacaggaggactactacagccggttaaagaaggagagtgataagcagctgtga
DBGET
integrated database retrieval system
