Pangasianodon hypophthalmus (striped catfish): 113530414
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Entry
113530414 CDS
T05759
Name
(RefSeq) protein SOGA1-like isoform X1
KO
K27704
microtubule cross-linking factor
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113530414
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113530414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
113530414
NCBI-ProteinID:
XP_026776154
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MTKAKVEVSSPVHALLSGAVKAEAHKMNQIKPKDQHSKPKWDPSSSRKEVKRCEKARRSA
PGSVKSRNKLSGRRTVSDASSAGESLSKDSGGKTDSSSETSECTSEENRAANNDVQSSNF
ETDTGGADAERTEDWGGEVAEMIECDFPNSTLTPALGRAERSISPFTSMDGRWKFSASEA
LEISGDGAHDDLLRDIDDLRSENEYLKDELEELRSEMLEMRDLYLEADMYQLQELKQQLD
QANKTCRILQYRLRKAERRSLRVAQTGQVDGELIRTLEHDVRVAKSVSLRLHTELEAVQK
KSLRLEWENEELRERLQNLEVAKQVLQAEMNKSRELFSQNSLKRRSLRSPGNKNEKKISP
QDDSADLKCQLHFAKEESALMCKKLTKMAEECETMREELSKYRLLYGDVDASQAAAGTVN
STHTREAEVKVHLRLVEEEATLLSRRIVELEVENRGLRAEMNEMRERAGWGQEEEDEVIE
GREKCLAMSLSAEKEKEANGVTHGHPESEERTEGSVQSVSVVGVENCPLSHNLREEPVDV
VTNHPQDQNICDENVAEKDQGCTASLKDLDALLAIRDQAMLVRSIIQFLIPPAKNGFSPM
SNHNFISSHHFLSKIKVDSHCLNNPWVLDPMLSPLTSGLEVLQAQLHTLVAKLDVLVNSV
PSEIGQDTNAGKVLETVEQVAQQCPAEKNTCHSSSNEEQTCNQASLELLTVQLRWFLQQW
HQGERPSGEDKNLFEMDIQKDLYPQMKADLLGAKKTSNSSREAKPLEKCHKQLSSALLSD
LKAALQDLCCELQEEYRAGQHIAQQFAEAKAAWTMECTELRSLVSRLEDTSEAKDSPDVK
MALQKDYFEELQNLLDESHSAVIDVTRQLKMCEHNWNCEPQELLTYLSEVHLDWGKQNKD
TESQAFKSPQKRGETKRLTHQAGPSAQRSNKNWIYLSQEAALVDREDPWKTWDCPIMPPS
FSGLNLKQTTAQKSHTAPEKTTIRIYYSPPSARRILLNAVPFEDKNKCEKKQKKEEPHSH
HSKHINETNVCDTWQGTLPYKSMIEQGPFAVIRSNSSSGFQSPGVSSSSCLPFSGWEVSG
NLSDDMKEMTASVLVRRRRSISGSRSVGVISIGTQTHSQPQVNSVGLQTDIYQNVCASKH
RSPRVHSFVSACSQNISSSLERIPGPLEKPPPCSTSPKLQRRHSTSSHFSSSSSSSSTTN
SSNSFNSASLSSSSSLTSSSRFEPPKEHSVWGLPQCSSRNTKPSSAFGGGSEKSAGRRSA
GIHKYGLVQEFFRNVCGRGEKPNPPNPGGEKVPHIRRDHASSTRLKKTEGPPSRIPTVPL
GRSDSVTRIVNHRFMKQGRKDEPRPPQTQTQGQCQNQTKTPMSKDKGFGPATLEDGPCGC
SSRTLASCFARVSRTNLRHTHSHCKLRPTAAGGKGNLLSQ
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcaaaagtcgaggttagctccccggttcacgcgctcctatccggcgcagtt
aaagcagaagcgcacaagatgaaccaaatcaaacctaaagaccaacattcaaaaccaaag
tgggacccgagcagcagccgaaaggaggtcaaacgctgtgagaaagccaggcgatcggct
cccggctcagtgaagagccgaaacaaactctccggccgcaggacagtttcagatgccagc
agcgcaggtgagagtttgagtaaagactccggtggaaagacagacagcagctcagagacg
tctgaatgcacttcggaggaaaacagagcagctaacaacgatgtgcagagcagcaacttt
gaaacagacaccggaggcgcagatgcagagagaacagaggactggggaggagaagtagcc
gaaatgatcgaatgtgactttcctaacagcaccctgacaccagcactcggtagagcagag
agaagcatttctcccttcacctccatggacggcagatggaagttcagcgcgtcagaagct
ttggagatcagcggggacggagcgcatgatgacctgctgagggacatcgacgacttacga
tcagaaaatgaatatttaaaggatgagttggaggagctgcgctcagagatgctggagatg
agggacctctatttggaggcggacatgtaccagctacaggaactcaagcagcaactggat
caggccaacaagacgtgtcgcatcttgcagtatcgccttcgcaaggccgagagacgcagt
ttgcgtgttgcccagactggccaggtcgacggagagcttatccgcaccctggagcatgat
gtccgggtagcaaaaagtgtgtccctgcgcctgcacactgagctcgaggcagtgcaaaag
aagagcttgcggctggagtgggaaaacgaagagctgcgggagcggctccagaatctggag
gtggcaaagcaggtcctgcaggcagaaatgaacaaatctagagagttgttctcacaaaat
tccctaaagaggagaagtttgagatctcctgggaacaagaatgaaaagaagatttcccca
caggatgatagtgcagatctgaaatgccagctacattttgctaaagaagaatcagccctt
atgtgcaagaagctgactaagatggctgaggaatgtgagaccatgcgagaggaattatcc
aagtacagactgctttatggcgatgttgatgcatctcaggctgcggcagggaccgttaac
tctacccacacacgtgaagcagaggtcaaagttcatcttcgtctggtggaagaagaagct
acactgctgagccgacggattgtagagctggaagtggaaaatcgtgggctgagggcagag
atgaatgaaatgagagagagagcaggatggggccaagaggaggaagacgaggttatagag
ggcagagagaagtgtctggcaatgtctttgtctgcagagaaagaaaaagaggccaacggt
gttacacatgggcatccagagtctgaagaaagaactgaaggcagtgtacagtcagtaagt
gtagtaggagtagagaactgtccattaagtcacaaccttagagaggagccagtggatgtg
gtgacaaaccatcctcaagaccaaaatatatgtgatgagaatgtagcagaaaaagaccag
ggttgtactgctagcctgaaggacctagatgccctacttgcaattcgtgaccaggctatg
ctagttagatcaattatccaattcctaatcccaccagcaaaaaacggtttctcaccaatg
tccaaccataactttatctctagccaccatttcctcagcaaaattaaggttgattctcat
tgcctgaataatccatgggttttggatcccatgctgagtcccctgaccagtggactggag
gtgctacaggcccagttacatacccttgttgcaaagctagatgttctggtaaattctgtg
cctagtgaaattggtcaagatacaaatgcaggaaaggtgctggagacagttgaacaagta
gcacagcaatgtcctgctgagaaaaatacctgccattccagcagcaatgaggagcagact
tgtaaccaggccagtcttgagctactcacggtacaactccgctggttcctccagcaatgg
catcaaggggagagaccttctggagaagacaagaacctgtttgagatggacatccagaaa
gatctttatcctcaaatgaaggctgacttactgggagccaagaaaacttccaactcatct
agagaagcaaaacctcttgaaaagtgccacaagcagctgagcagtgctcttctctcagat
ctgaaggcagcactgcaggatctatgttgtgagctgcaggaggaataccgggctggccag
catattgcacaacagtttgcagaagctaaagcagcatggactatggagtgtacagagctc
aggagccttgtaagtaggctggaggatacatctgaggcaaaggattctccagacgtgaag
atggcattgcagaaggattattttgaggagcttcagaaccttttagatgagtcccattct
gcagtcattgatgtgaccagacaactgaaaatgtgtgagcacaactggaactgtgagcct
caggagctcctaacatacctaagtgaagtccacctggactggggcaagcagaacaaggac
actgagtctcaggcattcaagagcccccagaaaagaggagaaactaagagactgactcat
caggctggtccatcagcacagaggtccaacaagaactggatatacctcagccaagaggca
gctttggtggacagagaagatccgtggaagacctgggactgtcccattatgccacccagc
ttctctgggctgaatctaaagcagacaacagcacagaagagccacacagctccagagaaa
accaccatccgtatatactatagtcccccatcagcccgcaggattcttctaaatgctgtg
ccatttgaagataagaacaaatgtgagaagaaacagaagaaagaggaaccacactcccac
cactctaaacatataaatgaaacaaatgtctgtgatacgtggcagggtactttaccttac
aagagcatgatagagcagggtccatttgctgttattagatccaattcatcttctggtttc
cagtcccctggtgtttcatcttcatcatgcttgcccttcagtggatgggaggtctcagga
aatctgagtgatgacatgaaagaaatgacagctagtgtgcttgtaaggaggagaaggagc
atctcgggtagccgctctgttggagtaatcagtataggaacccagactcatagccagcca
caggtgaatagtgttggacttcagactgacatctatcaaaatgtgtgtgcaagcaaacac
cgatcacccagggtccactcatttgtgtctgcctgctcccaaaacatttcatcttccctg
gagaggatacctgggccattagaaaagcctccaccttgctcaacttcaccgaagctacag
cgaaggcactccacctcatcccacttttcctccagctcttcttcttccagcactacaaat
tcctctaattctttcaactcagcttccttgtcctcatcatcgtctctgaccagttcctcc
aggttcgagccccctaaggaacatagtgtgtggggtcttcctcaatgcagttctagaaac
acgaaacccagctcagcatttgggggtggcagtgagaagtctgctggccgtaggtcagca
ggaatccacaagtatggcctggttcaagagtttttccgcaatgtgtgtggtcgtggagaa
aaaccaaacccgccaaatccaggaggggagaaagtaccacatatacgcagggatcatgca
agttcaacaagattaaagaaaacagaaggacctccttctcggattcccacagtgccactg
ggcaggagtgacagtgtgactagaattgttaatcacagatttatgaaacagggtaggaag
gatgagccacgaccaccccagacacaaacacagggtcagtgtcaaaaccagaccaagaca
cccatgagtaaggacaagggatttggccctgctactctggaggatggcccctgtggctgc
agctctcgaactctagcttcctgcttcgctcgagtgtctcgcaccaaccttcgtcatacc
cacagccactgtaaactgcgccccacagcagctggtgggaaagggaatctgctttctcag
tga
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