Pangasianodon hypophthalmus (striped catfish): 113530466
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Entry
113530466 CDS
T05759
Name
(RefSeq) neural cell adhesion molecule L1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecule (CAM) interaction
phyp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113530466
04517 IgSF CAM signaling
113530466
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113530466
04090 CD molecules [BR:
phyp04090
]
113530466
04091 Lectins [BR:
phyp04091
]
113530466
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
L1 family
113530466
CD molecules [BR:
phyp04090
]
Proteins
113530466
Lectins [BR:
phyp04091
]
I-type lectins (Siglecs)
113530466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
V-set
Bravo_FIGEY
Ig_VEGFR-1-like_5th
C2-set_3
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_5
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Sp38
Motif
Other DBs
NCBI-GeneID:
113530466
NCBI-ProteinID:
XP_026776288
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MPTTLLQQAGSRGRHLNHPLLLLCALFLLVLTPMPGQTAIHIAENYRIKELKTPPQITAQ
PESIIAFSSDDIMLKCEASGNPPPTFRWVKDGLAFDPSSISGVTTSLDSGSFTVKDAPIH
QFHGNYSCLASNELGTAVSNEVHIITEDTPTIQREKKEEKKVEEGSPVVLHCNPPQSSAT
PLIHWMDKRLRHIQQSERVIQGRDGNLYFSHVTFEDSRSDYTCNVQFLGARIIVAKEPIN
LRVTQSNSLRSRRPQMMRPTGTHSTYLVLRGQTLDLECIVQGLPTPSIQWVRKDGVLSES
RTSRENFDRLLRFTNISERDDGEYQCTASNSQGTVTHTYTISVEAAPYWIKEPVSELYAP
GETVRLECQADGIPTPQVTWSINGFPLSDTDPDVRQTVKGGTLILRDVELSDTAVYQCKA
SNKHGTILINTYVFVIVLPPQILTEDSLLYRVTEGKTAKLQCMTFGSPRPKVTWEGETWD
SVMSNSRMNQLSNGTLEISNVSHNDTGVYTCSVGEDKLTITAELEVLNRTVIVKPPQALY
VQKGKMATFTCQYQMDSNLGPPQILWRKTNKKLYESSDVDKYLIDETELIVNDVQDEDEG
VYSCEVITSLDMAEASGSLTVVDRPDPPSMLQITEPGVHSVTLLWVPGDNHKSPILEYVV
EAEETGADTEEWEELVRVAGDTRRTTLPLKPFLSYRFRVIAINKIGKSDPSQPSAAYSTP
AARPSSNPEGVHSESLEPDTLVITWKEMDRRSFNGPDFRYKVMWRKVVGSGPSWHSNFTT
SPPFVVMDVGDFSAFDIKVQAVNDLGEGPEPKSTIGYSGEDYPLEAPLNVGVILLNSTAI
RVTWAPVDRDTVRGHLMGYKIHLAYFGSCGKHHHQKCISGEGEPLNEAVVTTGADEEKKD
LGGLRPYSSYSLTVSVFNSKGDGPESEARPFQTPEGVPGPPTSLILLSPSETEMTLHWTP
PAQENGILVGYLLQYQELDNVDSPMQVEKIDDPTVHQLSIKDLDRHSRYRFYLRGRTAAG
EGLPITKVGETTLDGAPPRNISLSVGETAVNLSWVSPERQRNIGFHIHYLRKNGHGGWMQ
SEKVNTSQSFYSLQGLQPGSHYRLRFVFSNGTFWETDIQTEGAGVTEMQSSFATEGWFIG
LISALVLLLLLLLILCFIKRSKGGKYSVKDKEEGQVDSESRPMKDETFGEYRSLESDNEE
KRTASQPSLCEDSKLCSDDGLDDYGNSHSVHTKVTMDESLASQYSGVRDGPEIERHDSSP
LKSAATNQGLPNSAAVLD
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacgctactacagcaggctggcagcagggggcgccacctaaatcacccactc
ctgctcctctgtgcccttttccttctggtgctcactcctatgccaggccagactgccatc
catattgcagaaaactaccgcataaaagaactaaagacacccccgcagataactgcccaa
cctgaatccatcattgccttctcctctgatgatatcatgctcaagtgtgaggcgtctggg
aatccccctcccacatttcgatgggttaaagatggactagcatttgacccatccagcatc
tctggtgtcactacgtctctcgattcggggagttttacggttaaagatgctcccattcat
cagttccatggcaactacagctgcctggcctccaacgagctgggcacggctgtctccaac
gaggtccacatcatcaccgaggatactcctacaatacaacgggagaagaaggaggagaag
aaggtagaagaaggaagtcctgttgtcttacactgcaaccctccgcaaagttctgcgact
cctttgattcactggatggataagaggcttcggcacatccagcagagcgagcgtgtgatt
cagggccgtgatggaaacctctacttctctcatgtgacctttgaggacagcagaagcgat
tacacctgcaacgtgcagtttctgggagctcgcatcattgtagccaaggaacccattaac
ctgagggtcacacagtctaactcactgcgaagcagacggccacagatgatgagacctacc
ggcactcacagcacctatctagtcctgaggggccaaacactcgatctggagtgtatcgtc
cagggcctgcccactccctccatccagtgggtgaggaaggacggagtgctgtctgagtct
cgtacatccagagagaactttgaccggctgctgcgtttcaccaacatctcagagcgggat
gacggggagtaccagtgcacagccagcaactcccagggcaccgtcacacacacttatacc
atctctgtggaagctgctccatactggattaaggaaccagttagtgaactgtacgccccg
ggagagacagtcagattggagtgtcaggcagatgggatcccaactccgcaagtcacctgg
agtatcaatggatttcctctctcggatacagacccagacgtgcggcaaactgtaaaagga
ggaactctcatactgcgagatgtggagctcagcgacactgcagtgtaccagtgcaaggcc
tctaacaaacacggcaccatccttatcaacacctatgtcttcgtcattgtgcttcctcca
cagatcctgacagaggactcgttgttgtacagagtgacagagggaaagacggccaagttg
cagtgcatgacctttggttcacctcgcccgaaagtcacatgggagggtgaaacctgggac
tctgtgatgtctaactccaggatgaatcagctaagcaatggtactctagagattagtaat
gtgtcacacaatgatacaggtgtgtacacctgttcagtgggtgaagacaaactcaccatc
actgctgagctggaagtcctcaaccggacagtgattgtgaagccaccgcaggctctgtat
gttcagaaggggaagatggccaccttcacctgtcagtaccagatggacagcaatctgggt
ccacctcaaatcctgtggaggaaaaccaacaagaagctttatgagtcctctgatgtagac
aagtacttaattgatgagacagagctcatagtaaatgatgtccaggatgaagatgagggt
gtttatagttgtgaggtcataacgagtctggacatggctgaagctagtggcagcctcaca
gttgttgatcgaccggaccctccttccatgctgcagatcactgagcctggagttcactca
gtaactctgttatgggttcctggagataaccacaaaagccctattttagagtatgtggtg
gaggctgaagagactggcgctgacacggaggagtgggaggagcttgtgcgggtagctgga
gacactcggcgcaccacgctcccactgaaacccttcctctcgtaccgctttcgggtcatc
gccatcaataagatcggcaagagtgaccccagccagccctcagcagcttactccactcct
gcagctcgaccgagcagtaaccctgaaggagtgcacagcgagtccctcgaaccagacaca
cttgtcatcacatggaaggagatggatagaaggagctttaatggcccagatttccgctac
aaagtgatgtggaggaaggttgtaggcagtgggccatcttggcactcaaactttaccacc
tctccaccctttgttgtcatggacgtgggcgatttcagcgcatttgacattaaggtgcag
gctgttaatgatcttggagaaggcccagaacccaaatccaccatcggctactctggagag
gattatcccttggaggctcctctgaatgtaggagtgattctgctcaacagcactgccatc
agggtaacgtgggccccagtggacagagacaccgtgaggggacatctgatgggctacaag
atccacctggcgtacttcggctcctgcggcaaacaccatcaccaaaagtgtatcagcggg
gaaggtgagccactgaatgaggctgtagtgacaacaggagctgatgaggagaaaaaggat
ctgggaggcctgcggccgtattcctcctattctctcacggttagcgtcttcaatagcaaa
ggagacggacccgagtcagaagcccggcccttccagacgcccgagggagttcctggtcct
cccacttctttgatattgctcagtccgtctgagacagagatgacgctccactggactcca
cctgctcaagaaaatggaattctggtcggatacctactgcagtaccaagagctagacaat
gtggacagccccatgcaggtggagaagattgatgaccccacagtgcatcagctaagcatt
aaagatctggaccgtcatagccgttaccgtttctacctgcgggggcgcactgcagccgga
gaaggcttgcccatcaccaaagtgggagagacgacacttgatggagctccaccgcgcaac
attagtctgtctgttggggagacagcagttaatctaagctgggtttctcctgagagacaa
aggaacataggtttccacatccactacctgaggaagaatggccatggaggatggatgcag
tcagagaaagtgaatacgtctcagtcattttactccctgcagggtctccagcctggatct
cattaccgcttgcgcttcgtctttagcaatggtaccttctgggaaactgacatacagaca
gaaggagcaggagtgacagagatgcagagtagctttgctactgaaggctggtttattggg
ctcatcagcgccctcgtgctgttgttgctgcttctgctcattctctgctttatcaagcga
agcaaaggtggaaagtactcagtgaaagacaaggaggagggccaggtggactcagagtct
cggccgatgaaggacgagacgttcggggaatacagatcactagagagtgacaacgaggag
aagcgcacggccagccagccgtctctgtgcgaggacagcaagctgtgtagcgacgacggc
ctggatgattacggcaacagccacagcgttcacaccaaggtgaccatggacgagtctctg
gccagtcagtacagcggagttagagacgggccagagatcgagagacatgacagctcgccc
ctcaaatctgccgctaccaaccaaggcctgcccaactctgctgctgtcctcgactag
DBGET
integrated database retrieval system
