Pangasianodon hypophthalmus (striped catfish): 113530476
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Entry
113530476 CDS
T05759
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113530476 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113530476 (mlh3)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113530476 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
113530476
NCBI-ProteinID:
XP_026776326
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MIRSLSKEVQSHLRSGVAIFSLQQCVEELLLNSIDAGATCVAVKIDIEACKVQVLDNGSG
MDRENMERVGTRYCTSKCSSIEDLDNLCFYGFRGEAIASMATMATMVEITSRTKTSVKTF
VKRFHEGKASDVFEAQTTRPSAGTTVLICNFFHNLPVRRKRMDSVLEVERVRQRVEAISL
MHPSVSFTVKRDCSDTLLVQIPKARNTYYRFVQIHGLNRAQKLGEVNYTHGQFEMTGHVG
REGHYNNSLQFLFVNGRLLLKTRLHKLLNCLLRRPSNVQTSNLNVSAVIPSPKQKGSADL
HGVYIINIKCPYSEYDVCLEPAKSLIEFKDWDSVLLCIEEGIKVFLTKENLVSECSVSDI
QSFGEKESSPGGNVNIEDTGRLPVPEKNFGQDEEMPEPVRSNTESETNSDSDPEEEEMVN
NDAIDEPLQELLENVQNTECTDDREDNTSSLCVSSNKITHFENSRIDVIDHKVAYDSLRR
FTEPNLSCAPKRKLTLPHARSQTDGCDYGPKITRVTPHRKLTLSFETGSLDKFKRLFGKE
VEMKPQTMNTQIPYVLCPTDFFESSALKASSNLVCSESVPVEDVGVDRSLFKDNSVFKKF
QCSSASKRNRISLATKLSRKVEHEDTKNTLISDTLLNPLTQDTDFIEKFPNSLSVVVNND
GVLNHSVIAENSVTTEPHEVDRSDEPTFTAPNGQEMSTSTSTSTSEDTELTKNTTSPKPD
NPQGQIVDPASQHDLLPSKTGNEEQTANESRGHESDGTKPVSSDWLTHYDDSLGKLVYIN
QVTGLSKYENPSLKENQVPCSANLTNMAVSVVSKTGLEYRCYPFQTDLVLPFLPKPRAER
VRSTSIENGGPSSLSTLYSEWNNPVFVRPPQVAVDVTSGQAEGLAVKIHNILFPYRFTKE
MIHSMKVIHQVDKKFLACLINTTVENTPESSENEGNLLVLVDQHAAHERVRLEALVTESH
EDDPDTPGKKRLCASSVSPPLEIHMTEEEIRLLSLYQLSLRDLALEISFPQTEQSSVLVE
RLPTCFVEKENTEKRRGRRSVIKSIAEEYLRELIEALQSTGRVKVTLPLTVHNVLASQAC
HGAIKFNDELSKEECCSLVASLSSCQLPFQCAHGRPSILPLADLLHLEDEQELPKPNLKK
LRRMYKAWQLYGNN
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaagtctgtcgaaagaagttcaatcacacttgcgctctggagttgccattttc
tcattgcagcaatgcgtggaggagcttctactgaacagcattgatgccggagcaacatgt
gtggctgtgaagatagacatagaggcctgcaaagttcaggtcttagacaacggctcaggc
atggaccgagagaacatggagagggtcgggaccaggtattgcacgagcaaatgcagctcc
attgaagatttggataatctttgcttttatgggttcagaggagaagcaattgccagcatg
gccaccatggcaaccatggtagaaatcacctctcgcactaagacatctgtgaaaacattt
gttaaaaggtttcacgaaggtaaggcgtcagatgttttcgaggcgcagactactcgccca
tcagccgggacgacagtcctaatttgtaacttctttcacaacctgccagtcaggagaaaa
aggatggactctgtgctggaggtggagcgtgttcgtcagagagtggaggccatatcgctg
atgcatccatctgtgtcatttactgtcaaaagagattgttcagacacactcctggtacag
attcccaaagccaggaatacttactacagatttgttcagatccatggattgaatagggcc
cagaagctcggagaggtgaattatacgcatggacagtttgaaatgacagggcacgttggc
cgagagggacactacaacaacagcctgcagttcctcttcgtgaacggacgacttcttctg
aaaacacgtcttcacaaactactcaattgccttctcaggagaccgagtaatgtccaaacc
agcaatctaaatgtgtccgctgtcatcccaagccctaaacaaaaaggcagtgctgattta
catggagtttacatcattaatatcaagtgtccctattcggagtatgatgtgtgcctagag
ccagcgaagagtcttatagaattcaaagactgggatagcgtgctcttgtgcatcgaggaa
ggcataaaagtgttccttacaaaggagaacttagtatcagagtgttctgtgagtgacatc
caaagctttggggaaaaggaaagcagtccaggagggaatgtaaatattgaagacacagga
aggttaccagttcctgaaaaaaactttgggcaagatgaagagatgcctgaaccagtgcga
tcaaatacagagtctgaaacgaattcagattcagaccctgaagaagaagaaatggtgaac
aatgacgccattgacgagcctttgcaggaattgcttgaaaatgttcaaaacacagagtgc
actgatgatagggaagacaatacctcgtcactttgtgttagcagcaataaaataacacac
tttgaaaattccaggattgatgtcattgatcataaagtggcatatgacagtttgaggaga
ttcactgaacccaatctcagctgtgcaccgaagagaaagttgacattaccccatgctcgg
agtcagacagacggctgcgactacgggccaaagatcactagggtcacaccgcatcgcaaa
ttaacactgtcttttgaaactggatctcttgacaaattcaagaggttgtttggaaaagag
gttgaaatgaaaccccaaacaatgaacacacaaatcccttatgttttatgtccgacagac
ttttttgagagttctgctttgaaagcaagcagtaatttagtctgttctgaaagtgtgcca
gtagaagatgttggagtagatcgctctttgttcaaggacaattctgtcttcaagaagttt
cagtgttcctcagccagcaagaggaacagaatatcattagcgacaaagctctctcgcaag
gtagaacatgaagatacaaaaaatacgctcatcagtgacacattgcttaaccctttaaca
caagatacagactttatagagaagtttcccaattctctgtcagtggtggtgaacaatgat
ggtgttttaaatcacagcgttatagctgagaactctgtaacgaccgagccgcatgaggtt
gaccgttcagatgaacccacattcactgctcccaatggacaggaaatgtcaacaagcacc
tccacctccaccagcgaagacactgagctcactaaaaatacgacttcccctaagcccgat
aacccccaaggtcaaatagttgaccctgcatcacaacatgacctattgccctccaaaaca
ggaaatgaggaacagactgcaaatgaaagccggggccatgagagtgatggaacgaagcct
gtatcgagtgactggctgacacattacgatgattcattgggaaagttggtctacatcaat
caagtaacgggactcagtaaatatgagaatccatcactgaaggagaatcaagtaccgtgc
tccgcaaacctcaccaacatggcggtcagcgttgtttcaaagacaggattggagtacaga
tgctacccttttcagacagaccttgtattgccctttctccccaaacctagagcagagaga
gttcgtagcacaagcatagaaaatggaggtccgagttccctatcgactctttactctgag
tggaataaccctgtgtttgtacgaccacctcaggttgctgtggatgtgacaagtggccaa
gccgaaggccttgctgtgaaaatccacaacattctcttcccctaccgcttcactaaggaa
atgatccactcgatgaaggttattcatcaagtagacaagaaatttcttgcctgtctcatt
aatactacagtcgaaaataccccagagtctagtgaaaatgaaggaaaccttcttgtactg
gtcgatcaacacgcagctcatgaaagggttcgcttggaggcgcttgtgacagagtctcat
gaggacgacccggacacaccaggtaaaaagagactgtgtgcatcaagtgtaagtcctccc
ctggagatccatatgactgaggaagagataagactgctgagtttgtatcagctttcccta
agagacctggctctcgaaataagcttccctcagacagagcagtcgtctgtgctcgtggag
cgactccccacctgtttcgtagagaaagagaacacagaaaagcggcgtggcagacgtagt
gtcatcaagtctatcgcagaggaatacttacgagagctgattgaggctctgcagtcaaca
ggaagagtaaaagtcactttgcctctaacagtccacaatgtccttgcttcacaagcttgt
catggagcaataaagttcaatgatgagctgagtaaagaggagtgctgcagtctggtggcg
tccctctcgtcctgccagctgcccttccagtgtgctcacggacggccctccattcttcct
ctagctgatcttctccacttagaggatgaacaggagctccccaaaccaaatctcaagaaa
ttgagaagaatgtacaaggcatggcaactttatggaaataattaa
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