Pangasianodon hypophthalmus (striped catfish): 113530584
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Entry
113530584 CDS
T05759
Name
(RefSeq) elongation factor 1-alpha 2
KO
K03231
elongation factor 1-alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113530584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113530584
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113530584
03012 Translation factors [BR:
phyp03012
]
113530584
04131 Membrane trafficking [BR:
phyp04131
]
113530584
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113530584
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113530584
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113530584
Translation factors [BR:
phyp03012
]
Eukaryotic type
Elongation factors
113530584
Membrane trafficking [BR:
phyp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
113530584
Exosome [BR:
phyp04147
]
Exosomal proteins
Proteins found in most exosomes
113530584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
113530584
NCBI-ProteinID:
XP_026776524
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVAVNKMDSTEPSYSEKRYDEIVKEVSAYIKK
IGYSPASVPFVPISGWHGDNMLEPSPNMAWFKGWKLDRKEQHATGITLLEALDTIMPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHESLS
EAVPGDNVGFNVKNVSVKDIRRGNVCGDSRSDPPQEASGFTAQVIILNHPGQISAGYSPV
LDCHTAHIACKFAELREKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKNVEKKIGGSGKITKSAQKAQKAGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagatccatattaatatagttgtgattggccatgtcgattctgggaag
tccaccaccactggccacctcatttataagtgtggtggcattgacaagagaaccatcgag
aaattcgagaaggaggctgcagagatggggaaaggttcgtttaagtatgcttgggttctg
gacaagctgaaggcagaacgagagagaggcatcacaatagacatctccttgtggaagttt
gagacctctaaatactacatcaccatcatcgatgctccaggacacagagatttcatcaag
aacatgattacaggaacttcccaggcagactgtgctgttcttattgtggcagctggggta
ggtgagttcgaggcgggtatctctaagaatggacagacgcgtgaacatgccctgctggca
tacacgctgggtgtcaagcagctgattgttgccgttaacaaaatggactccacagagcct
tcttacagcgagaagcgctatgacgagattgttaaagaggtcagtgcttacatcaagaag
attggctacagccctgcctctgtacccttcgtccccatttctggatggcatggggacaac
atgctggaaccttcccctaatatggcatggtttaaaggctggaaacttgaccggaaggag
cagcatgccactggaatcactctccttgaggccttggacactatcatgcctcctacacgt
cccactgacaagcctttacgccttcctctgcaggatgtttacaaaattggaggcatcggg
acagtacctgtgggcagagtggaaaccggcatcctgcgtccaggcatggtggtgaccttt
gcccctgtcaatatcaccacagaagtgaagtctgttgagatgcaccacgagtccctgagt
gaagcagtaccaggtgataatgtaggattcaatgtgaagaacgtgtcagtgaaggacatt
cgcagggggaatgtgtgtggagacagccggtcagacccaccccaggaagcttcaggcttc
acagcacaggttatcattctaaatcatccagggcaaatcagtgccggctactcccccgtc
ctcgactgtcacacggctcacatcgcctgcaagtttgccgagctgagggagaagattgac
cgtcgctcagggaagaagctggaagacaaccccaagtccctgaagtctggagatgctgcc
attgtagacatgattccagggaaacccatgtgtgtggagagcttttctcagtatcctcct
ttgggacgctttgctgtgcgagatatgagacaaaccgttgctgttggcgtcatcaagaac
gtagaaaagaaaattggtgggagcggcaaaatcaccaaatcagcccaaaaagctcagaaa
gctggcaaatga
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