Pangasianodon hypophthalmus (striped catfish): 113530665
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Entry
113530665 CDS
T05759
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113530665 (tfip11)
Spliceosome [BR:
phyp03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
113530665 (tfip11)
Other components
Complex C specific factors
113530665 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
113530665
NCBI-ProteinID:
XP_026776670
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MSMSHLYGRRGDEEEEDGVEIEKFEVTEWDLANEFNPDRRRHRQTKEEATYGIWAEHDSD
DERPSFGGKRSKDYTAPVNFISAGLRKTAAEEKREQHGSDDSDEDEEAPPPPRTTAPRKL
QTGGNFKTSQKTFAGNIRPGQDIGGWEKHTRGIGQKLLQKMGYIPGKGLGKNAQGIVNPI
EAKVRKGKGAVGAYGNERTQQSIQDFPVVDSEEEEEKEFQRELGQWRKEPGAGKKKPKYS
FKTVEELKAHGKLSNKSMSQPAGELAQVKVIDMTGREQKVYYSYSQMSQKHSIPEEAPMS
ASAREQKSSCFALPELEHNLKLLIELNEQDILQSSRRLQHERDTVVSLRHESTALQARLS
EESAAVERLEQVMELVERLETAGEGGGPPLSLEECVQAFQQMQTHFYHEYKSLGLADLAV
SVVHPLLNEKLRNWDPLKDCSFGLEEVGQWRAILEGTQLQHSTPDSNHMDPYHRLIWEVW
VPVLRNCVAQWQPRNVGPMVDLVDCWAPVLPLWILDYVLEQLIFPRLQKEVDNWNPLTDT
VPIHSWIHPWLPQMQMRLEPLYPPIRNKLANALQRWHPSDASARLILQPWKDVFTPGAWE
AFMVKNIVPKLALCLGELVVNPHQQLIDPFNWVMDWEGMLSLSSMVGLLEKHFFNKWLQV
LCSWLSNNPNYEEITKWYLGWKGMLSEQLLSHPVIKEKLNEALDIMNRAVASGLGGYMQP
GAKENIAYLTQTERRKDFQYEPPAPPQREVESSVPRLPVTGPVSASIPTNFKDLIQAKAE
ENGIVFMPIVGKRHMGKQLYTFGRIIIYVERGVVFVQGKKTWVPTSLQSLIDMAK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatctgtatgggcgtaggggagacgaggaggaggaggatggagtcgaa
attgagaagtttgaggttacagaatgggacctggccaacgagtttaatccagacagacgt
cgtcacaggcagaccaaagaggaggctacatatggtatatgggctgaacatgattcagat
gatgagagaccgagctttggaggcaagagatcaaaagactacacagcccctgtgaacttt
ataagtgctggtctgaggaagactgcagctgaggagaaaagggagcagcatggctcagat
gactcagacgaggatgaagaagcacctcctccaccccgtactactgcacctagaaagctg
caaacgggtgggaattttaaaacttcccagaagacatttgcaggcaatatccgtccaggg
caggacattggtggctgggagaaacacacgcgaggcattggccagaagctcctacagaag
atgggctacatcccgggcaaaggccttggaaaaaatgcacagggtattgtaaacccaatt
gaggctaaagtacgtaagggaaaaggagcagtgggggcttatgggaatgagaggactcag
cagtcaattcaggactttccagtggtagactcggaggaggaagaggagaaggagtttcag
agagagttggggcaatggcggaaagagcctggagcaggaaagaaaaagcctaaatactcc
ttcaaaactgtggaggaactgaaagctcatggaaaactttccaacaagagcatgagccaa
ccagctggagaacttgcccaagtcaaggtgatagatatgacaggccgggagcagaaggtc
tactacagctacagtcagatgagccaaaagcacagcattcctgaggaggctcctatgagt
gcaagtgcacgagagcagaagagctcgtgttttgctctgcctgaactcgaacataacctc
aaactgctcatcgagctcaatgagcaagatattttacagagctctcggcgtttgcagcat
gagagggatacggtggtgtctctgaggcatgagagcacggccctgcaggcacggttaagc
gaggagagtgcggcagtggagcgactagagcaggtgatggagctggtggagcggctggag
acagctggggaaggaggtggccctccactctcgctcgaagagtgtgtccaggccttccag
cagatgcagacgcacttctaccatgagtacaagagcttggggctcgccgatctcgctgtg
tctgtggtgcatccactactgaatgagaaactcagaaactgggacccgctgaaggactgt
tcatttggtttagaggaggtaggtcagtggagggccattctagagggtacacaacttcaa
catagtacacctgactccaaccacatggacccctaccacaggttgatatgggaggtgtgg
gttccagtgctaaggaactgcgtggcacagtggcaacccagaaatgttggtcctatggtg
gaccttgtggactgctgggcccctgtgctacctctctggatcctcgactatgtgctggag
cagctcatcttcccacggctacagaaagaggtggataactggaacccgctgacagacacg
gtgcccatccactcatggatccacccatggttgcctcagatgcagatgcggctagagcca
ctgtacccacctatacgcaacaagctggcaaatgccctacagcgctggcacccaagtgat
gcttcagcccgactcatcctgcagccttggaaagacgttttcacccccggagcctgggag
gccttcatggtcaaaaacattgtccctaagctagctctgtgtctaggggagctggtggtg
aacccacatcagcagctgatcgacccattcaactgggtgatggactgggagggcatgttg
tctctctccagtatggtgggattacttgaaaagcacttttttaacaaatggctacaggtg
ttgtgctcttggctgagtaacaatcctaactatgaggagatcactaagtggtatctgggt
tggaagggaatgctgtcagagcaactgctcagtcaccctgtcattaaagagaagctgaat
gaggccctggacataatgaacagagctgtagcctctggactaggtggctacatgcagcct
ggagcaaaggagaacattgcgtatctgacccagacagagaggaggaaagatttccagtat
gagccaccagcaccaccgcagcgtgaggtagagagcagcgttccacgcctgcctgtcact
ggccctgtctcagcctccatacccaccaacttcaaagacctgatccaggccaaagcagag
gagaatggcattgtcttcatgcctatagtgggcaagaggcacatgggcaagcaactttac
acgtttggcaggatcattatctatgtggagaggggtgttgtgtttgtccagggaaaaaag
acctgggtccctacatcactacagagtctcattgatatggccaaataa
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